Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq175 89.7 8e-13
>seq175
Length=5584636
Score = 89.7 bits (98), Expect = 8e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| |||| || |||| || || || || ||| | ||| |||| |
Sbjct 1836299 ATGCACATTTTTGTAAAAACCCTAATGGGGAAGACCATCACTCTTGAGGATGAACCCTCA 1836358
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|||||||| ||| ||||| || || || ||||||||||| || | |||||||||
Sbjct 1836359 GATACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTTCTCCTGATCAA 1836418
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || || ||||| || ||| || | || ||| | | || || || || ||
Sbjct 1836419 CAGAGACTGATCTTTGCTGGCAAAAAACTGGAAGATGGACCTACTTTGTTTGACTACAAC 1836478
Query 124719 ATTCAAAAAGAATCAACTTTGCAT 124742
|||||||| || || ||| | |||
Sbjct 1836479 ATTCAAAAGGAGTCTACTCTTCAT 1836502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755396290646400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |