Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq102 553 2e-152
seq87 322 6e-83
seq88 122 1e-22
seq23 114 2e-20
seq86 107 2e-18
seq9 102 1e-16
>seq102
Length=10627846
Score = 553 bits (612), Expect = 2e-152
Identities = 1452/2195 (66%), Gaps = 40/2195 (2%)
Strand=Plus/Minus
Query 62070 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 62129
||| | || | || ||| ||||| || || || | ||| | |||| || || || | |
Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361
Query 62130 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 62189
||||| || ||||| ||| | || || || |||||||| |||| | | || ||||||
Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301
Query 62190 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCC 62247
|| ||||| || || || ||| || |||| || | || || || || | |||||||
Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241
Query 62248 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATGGATC 62304
| | || ||||||| | |||| | || || |||| | ||||| |||| || || |
Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181
Query 62305 CAC--CATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362
|| ||| | |||||| || || | ||| |||||||| || | ||||| || |
Sbjct 1347180 CATTGCATGAA--ATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAG 1347123
Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422
| || | || | || || || || | || |||||||| ||||| ||||| | ||||||
Sbjct 1347122 ATCTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTA 1347063
Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482
|| || ||||||||||||| ||||||||||| |||| || ||||||||||| ||
Sbjct 1347062 GATGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGC 1347003
Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542
||| ||||| | || | | |||||| ||||| | ||| || || || || | |||
Sbjct 1347002 AGTAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTT 1346943
Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602
| | ||| | | | ||| || || | || | |||| | | || ||
Sbjct 1346942 GACAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGT---ACACCAGAGGAT 1346887
Query 62603 ACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTT 62662
| || ||| | || | |||| || ||||||| || | | || |||||||
Sbjct 1346886 TCTTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTC 1346827
Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722
|||||| || || | || || ||||||||| ||||||| || | |||||| | ||
Sbjct 1346826 ACAACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTG 1346767
Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782
|| || || || ||| | ||||| || | || ||||| || || || | ||||| ||
Sbjct 1346766 GGCATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTAC 1346707
Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842
||| | || || || ||| || ||| | || | | |||||||||||| | ||
Sbjct 1346706 CCCAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTA 1346648
Query 62843 ATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTT 62902
||||||||| |||||||||| | || ||||| |||||| || || | ||
Sbjct 1346647 ATTAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTT 1346588
Query 62903 GAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATT 62959
||| ||| || ||| | ||| |||| |||| || | || |||| ||
Sbjct 1346587 CTTAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTT 1346528
Query 62960 ACACACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017
||| || || ||||||| | || | ||| | || ||| || ||||| || || ||
Sbjct 1346527 ACAAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTG 1346470
Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077
|| ||||| ||||| | || || | || ||||| ||| | | |||||| || ||
Sbjct 1346469 CATTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGC 1346410
Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGC 63136
||| | ||||||| || || |||||| || | || || | ||| | | || | ||
Sbjct 1346409 ATGTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCT-GTGC 1346351
Query 63137 CTTTATTATAGATTTGTAT-CTCCTTTCTCTTTCGTATAGA----GTATACAATCGTTCG 63191
|||| | |||| | | || |||| ||| ||||| || ||
Sbjct 1346350 TTTTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCA 1346296
Query 63192 AACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCAC 63251
|| || |||||||||| | |||| | | || | |||| |||||| || | |||||
Sbjct 1346295 AATTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAG 1346236
Query 63252 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63311
|| | | || |||| |||||||||||||||| |||||||||| || | |||||
Sbjct 1346235 TCCTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGG 1346176
Query 63312 TCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63371
|| || | ||||| || || ||||| ||||| || | ||| |||||| | | ||
Sbjct 1346175 TCCCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATG 1346116
Query 63372 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63431
||| ||||||| || |||| ||| || || | || || || | ||||| || |||
Sbjct 1346115 TCA-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAG 1346057
Query 63432 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63491
|| | || || | ||||| ||||| ||||||| ||| || | || | || || |
Sbjct 1346056 TCCACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTG 1345997
Query 63492 CCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63551
||||| | || | ||||||| ||| | || | ||| ||| | | | ||| |||
Sbjct 1345996 CCATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATT 1345937
Query 63552 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATG 63611
||||| || || || |||| ||| || | |||| || ||||| |||||||| ||
Sbjct 1345936 CCCCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATA 1345877
Query 63612 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCA 63671
|| ||||| |||| | || || |||||||||| ||| | | | || || |||
Sbjct 1345876 CTGTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCA 1345817
Query 63672 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 63731
|| | | || || || || |||||||| || ||||| || || ||||| || |||
Sbjct 1345816 TTGGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCA 1345757
Query 63732 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63791
||||| | || || || || ||||| || || | || | ||| ||||| || ||
Sbjct 1345756 ATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGT 1345697
Query 63792 GGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63851
||||||||| | ||| || || |||||||| ||||| |||| || || |||
Sbjct 1345696 GGTCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAA 1345637
Query 63852 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTA 63911
||||| || || || || || |||| || || ||||| | ||||| || | ||| |||
Sbjct 1345636 CCAAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTA 1345577
Query 63912 TATTTGTTAACTATATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTT 63969
| || ||||||| ||| | || | | || | || |||| ||||| |
Sbjct 1345576 TTGGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTAT 1345519
Query 63970 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 64029
|||||| | |||||| | | || |||||||| ||||| || | ||| || ||||| |
Sbjct 1345518 GAGGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTT 1345459
Query 64030 TGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64089
|||| | || || | || | || || || | |||||||| || || || | ||||
Sbjct 1345458 TGTGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAG 1345399
Query 64090 TACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149
| | || || |||||||| || |||| |||||| ||| || || || || ||| | |
Sbjct 1345398 TCAAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGT 1345339
Query 64150 ATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGC 64209
||| || || || || | ||| | || | | |||||| | | ||| | || | |
Sbjct 1345338 ATAAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATCAACAAAGTCCATATTGAGTC 1345279
Query 64210 CATAGCACAATTTTCT-AATACGAGACGTGATTTT 64243
|| |||| || |||| || | ||| ||||||||
Sbjct 1345278 CACAGCA-AAGCTTCTGGATTCAAGAAGTGATTTT 1345245
>seq87
Length=11743621
Score = 322 bits (356), Expect = 6e-83
Identities = 622/912 (68%), Gaps = 18/912 (2%)
Strand=Plus/Plus
Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291
|||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| ||
Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163
Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351
| ||||| || | || ||||| || |||||| | |||||| ||| ||||| |
Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215
Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411
|||| || ||||| ||||| || || | | || ||||| |||| ||| || |
Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275
Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471
||| ||||| || || | || || ||||| | |||||||||| || || |
Sbjct 8842276 GTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334
Query 33472 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530
| || || ||| ||| ||||||| | || | ||| || || ||||| | || ||
Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393
Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590
| | || | | || ||| |||| || ||||| ||| | || | ||
Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453
Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650
|| ||||| | || ||| ||||| ||||| ||||| || ||| | ||||| || ||||||
Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513
Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710
| || || || || || || |||||||| || || || || ||||||||||||||||||
Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573
Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33767
| || |||||||| | | | || ||||| | | | | || ||||| |
Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633
Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827
|||||||| |||||||| |||||||||||||| | ||| |||||||| |||||| |
Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAGAGAAAC 8842692
Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887
| |||| || |||||||| ||||| || | | ||| | |||||||| |||||
Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752
Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947
|||||||| || || || || || || |||| ||| | || || |||||||| |||| |
Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812
Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007
| |||||| | || |||||||||| ||| ||||| || |||||||| || |||
Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872
Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067
| |||||| | |||||||| |||| | || | || | ||| | | || ||
Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
|| || | ||||| || || | |||||||| || | ||| || || |||||||| | |
Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992
Query 34128 CAGATGTCATGA 34139
|| || ||||||
Sbjct 8842993 CAAATATCATGA 8843004
>seq88
Length=11737398
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 362945 CTGTTTCTTACACCATA 362961
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || |||||||| || |||||| ||| | || || || |||||||| |
Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| ||| ||||||||||||||||| || || || || || ||||| || | || || |
Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
|||| | |||||||| | || ||||||| | |||| | || || ||||
Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401
Score = 105 bits (116), Expect = 8e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| ||||||||||||||||||||| ||||||||||| || | ||||| || || | |
Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 371480 AGGCTCCAGGTAAATAGC 371497
Score = 95.1 bits (104), Expect = 2e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || |||||||| || | || || || |||| |||||| || || | || || |
Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
|||||||||||||||| || | |||||| | || || || || || ||||| ||||
Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | || ||||| || || || | ||||| || ||||| || || || | ||| |
Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 366667 ATTTATTTGA 366676
>seq23
Length=24341844
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | ||| || ||||| ||||| || ||||||| || || || |
Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| ||||| || || || || || |||||||||||||||||||| || |||||||
Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162
Query 33724 CAATAAGTCTCTCTCC 33739
| | || | ||||||
Sbjct 8996163 CTACAACACGCTCTCC 8996178
Score = 100 bits (110), Expect = 4e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901
|||||||| ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574
Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961
|| || || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634
>seq86
Length=11983830
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|| ||||||||||||| || || |||||||||| || ||||||||||||| |||
Sbjct 6553578 GTCACTTTCTATGATGTATACATTATTCTACAAGCTTTTATACTGACTACTGCAGTATTT 6553637
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
|||| | | ||| ||| |||||||||||| ||||||||||| || ||| ||| | ||||
Sbjct 6553638 CTTGGTTTAACTGCATATACTCTACAATCTAAGAGAGATTTTAGCAAATTTGGAGCAGG 6553696
Score = 104 bits (114), Expect = 3e-17
Identities = 88/107 (82%), Gaps = 5/107 (5%)
Strand=Plus/Plus
Query 188140 TGTCGCCACCATGGTCACACC-GAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTT 188194
|||||||||||||| || || || |||| | | | || |||||||||||| |||||
Sbjct 6541439 TGTCGCCACCATGGCCAGCCCAGACCCTCGGTACTCCTCCTTCTCCATCGAGGATGACTT 6541498
Query 188195 CAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGG 188241
|||||||| ||||| ||||| ||||||||||||||||| |||||||
Sbjct 6541499 CAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTGCACATCCGAATGG 6541545
>seq9
Length=34412642
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || ||||| || ||||| ||||| || || | ||| ||
Sbjct 15801832 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTT 15801773
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
||||| ||||| | ||| || |||||||| ||||| || |||||||| |||||||||||
Sbjct 15801772 AGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGGC 15801714
Score = 89.7 bits (98), Expect = 6e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025
|| |||||||| || ||||||||||||||||||||||| || || || || ||||||
Sbjct 15797776 AAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGACGTGGGAGATAAAA 15797717
Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074
|| || || |||| ||| || || ||||||| | || ||| || ||||
Sbjct 15797716 TACTTCTCATCTGATGTAAGCTTGTTCCAATGAGGGAGATCCTTTGATA 15797668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629767820791440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |