Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq102 553 2e-152 seq87 322 6e-83 seq88 122 1e-22 seq23 114 2e-20 seq86 107 2e-18 seq9 102 1e-16 >seq102 Length=10627846 Score = 553 bits (612), Expect = 2e-152 Identities = 1452/2195 (66%), Gaps = 40/2195 (2%) Strand=Plus/Minus Query 62070 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 62129 ||| | || | || ||| ||||| || || || | ||| | |||| || || || | | Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361 Query 62130 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 62189 ||||| || ||||| ||| | || || || |||||||| |||| | | || |||||| Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301 Query 62190 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCC 62247 || ||||| || || || ||| || |||| || | || || || || | ||||||| Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241 Query 62248 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATGGATC 62304 | | || ||||||| | |||| | || || |||| | ||||| |||| || || | Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181 Query 62305 CAC--CATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 || ||| | |||||| || || | ||| |||||||| || | ||||| || | Sbjct 1347180 CATTGCATGAA--ATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAG 1347123 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | || | || | || || || || | || |||||||| ||||| ||||| | |||||| Sbjct 1347122 ATCTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTA 1347063 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 || || ||||||||||||| ||||||||||| |||| || ||||||||||| || Sbjct 1347062 GATGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGC 1347003 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 ||| ||||| | || | | |||||| ||||| | ||| || || || || | ||| Sbjct 1347002 AGTAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTT 1346943 Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602 | | ||| | | | ||| || || | || | |||| | | || || Sbjct 1346942 GACAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGT---ACACCAGAGGAT 1346887 Query 62603 ACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTT 62662 | || ||| | || | |||| || ||||||| || | | || ||||||| Sbjct 1346886 TCTTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTC 1346827 Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722 |||||| || || | || || ||||||||| ||||||| || | |||||| | || Sbjct 1346826 ACAACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTG 1346767 Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782 || || || || ||| | ||||| || | || ||||| || || || | ||||| || Sbjct 1346766 GGCATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTAC 1346707 Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842 ||| | || || || ||| || ||| | || | | |||||||||||| | || Sbjct 1346706 CCCAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTA 1346648 Query 62843 ATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTT 62902 ||||||||| |||||||||| | || ||||| |||||| || || | || Sbjct 1346647 ATTAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTT 1346588 Query 62903 GAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATT 62959 ||| ||| || ||| | ||| |||| |||| || | || |||| || Sbjct 1346587 CTTAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTT 1346528 Query 62960 ACACACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017 ||| || || ||||||| | || | ||| | || ||| || ||||| || || || Sbjct 1346527 ACAAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTG 1346470 Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077 || ||||| ||||| | || || | || ||||| ||| | | |||||| || || Sbjct 1346469 CATTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGC 1346410 Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGC 63136 ||| | ||||||| || || |||||| || | || || | ||| | | || | || Sbjct 1346409 ATGTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCT-GTGC 1346351 Query 63137 CTTTATTATAGATTTGTAT-CTCCTTTCTCTTTCGTATAGA----GTATACAATCGTTCG 63191 |||| | |||| | | || |||| ||| ||||| || || Sbjct 1346350 TTTTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCA 1346296 Query 63192 AACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCAC 63251 || || |||||||||| | |||| | | || | |||| |||||| || | ||||| Sbjct 1346295 AATTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAG 1346236 Query 63252 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63311 || | | || |||| |||||||||||||||| |||||||||| || | ||||| Sbjct 1346235 TCCTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGG 1346176 Query 63312 TCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63371 || || | ||||| || || ||||| ||||| || | ||| |||||| | | || Sbjct 1346175 TCCCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATG 1346116 Query 63372 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63431 ||| ||||||| || |||| ||| || || | || || || | ||||| || ||| Sbjct 1346115 TCA-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAG 1346057 Query 63432 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63491 || | || || | ||||| ||||| ||||||| ||| || | || | || || | Sbjct 1346056 TCCACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTG 1345997 Query 63492 CCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63551 ||||| | || | ||||||| ||| | || | ||| ||| | | | ||| ||| Sbjct 1345996 CCATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATT 1345937 Query 63552 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATG 63611 ||||| || || || |||| ||| || | |||| || ||||| |||||||| || Sbjct 1345936 CCCCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATA 1345877 Query 63612 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCA 63671 || ||||| |||| | || || |||||||||| ||| | | | || || ||| Sbjct 1345876 CTGTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCA 1345817 Query 63672 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 63731 || | | || || || || |||||||| || ||||| || || ||||| || ||| Sbjct 1345816 TTGGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCA 1345757 Query 63732 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63791 ||||| | || || || || ||||| || || | || | ||| ||||| || || Sbjct 1345756 ATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGT 1345697 Query 63792 GGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63851 ||||||||| | ||| || || |||||||| ||||| |||| || || ||| Sbjct 1345696 GGTCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAA 1345637 Query 63852 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTA 63911 ||||| || || || || || |||| || || ||||| | ||||| || | ||| ||| Sbjct 1345636 CCAAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTA 1345577 Query 63912 TATTTGTTAACTATATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTT 63969 | || ||||||| ||| | || | | || | || |||| ||||| | Sbjct 1345576 TTGGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTAT 1345519 Query 63970 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 64029 |||||| | |||||| | | || |||||||| ||||| || | ||| || ||||| | Sbjct 1345518 GAGGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTT 1345459 Query 64030 TGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64089 |||| | || || | || | || || || | |||||||| || || || | |||| Sbjct 1345458 TGTGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAG 1345399 Query 64090 TACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149 | | || || |||||||| || |||| |||||| ||| || || || || ||| | | Sbjct 1345398 TCAAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGT 1345339 Query 64150 ATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGC 64209 ||| || || || || | ||| | || | | |||||| | | ||| | || | | Sbjct 1345338 ATAAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATCAACAAAGTCCATATTGAGTC 1345279 Query 64210 CATAGCACAATTTTCT-AATACGAGACGTGATTTT 64243 || |||| || |||| || | ||| |||||||| Sbjct 1345278 CACAGCA-AAGCTTCTGGATTCAAGAAGTGATTTT 1345245 >seq87 Length=11743621 Score = 322 bits (356), Expect = 6e-83 Identities = 622/912 (68%), Gaps = 18/912 (2%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| || Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | ||||| || | || ||||| || |||||| | |||||| ||| ||||| | Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 |||| || ||||| ||||| || || | | || ||||| |||| ||| || | Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||| ||||| || || | || || ||||| | |||||||||| || || | Sbjct 8842276 GTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334 Query 33472 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 | || || ||| ||| ||||||| | || | ||| || || ||||| | || || Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 | | || | | || ||| |||| || ||||| ||| | || | || Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || ||||| | || ||| ||||| ||||| ||||| || ||| | ||||| || |||||| Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 | || || || || || || |||||||| || || || || |||||||||||||||||| Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33767 | || |||||||| | | | || ||||| | | | | || ||||| | Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 |||||||| |||||||| |||||||||||||| | ||| |||||||| |||||| | Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAGAGAAAC 8842692 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | |||| || |||||||| ||||| || | | ||| | |||||||| ||||| Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| || || || || || || |||| ||| | || || |||||||| |||| | Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | |||||| | || |||||||||| ||| ||||| || |||||||| || ||| Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872 Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067 | |||||| | |||||||| |||| | || | || | ||| | | || || Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || || | ||||| || || | |||||||| || | ||| || || |||||||| | | Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992 Query 34128 CAGATGTCATGA 34139 || || |||||| Sbjct 8842993 CAAATATCATGA 8843004 >seq88 Length=11737398 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 362945 CTGTTTCTTACACCATA 362961 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| ||||||||||||||||| || || || || || ||||| || | || || | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 |||| | |||||||| | || ||||||| | |||| | || || |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || ||||||||||||||||||||| ||||||||||| || | ||||| || || | | Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 371480 AGGCTCCAGGTAAATAGC 371497 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || | || || || |||| |||||| || || | || || | Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 |||||||||||||||| || | |||||| | || || || || || ||||| |||| Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | || ||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 366667 ATTTATTTGA 366676 >seq23 Length=24341844 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || ||||| ||||| || ||||||| || || || | Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || |||||||||||||||||||| || ||||||| Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162 Query 33724 CAATAAGTCTCTCTCC 33739 | | || | |||||| Sbjct 8996163 CTACAACACGCTCTCC 8996178 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634 >seq86 Length=11983830 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 || ||||||||||||| || || |||||||||| || ||||||||||||| ||| Sbjct 6553578 GTCACTTTCTATGATGTATACATTATTCTACAAGCTTTTATACTGACTACTGCAGTATTT 6553637 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | | ||| ||| |||||||||||| ||||||||||| || ||| ||| | |||| Sbjct 6553638 CTTGGTTTAACTGCATATACTCTACAATCTAAGAGAGATTTTAGCAAATTTGGAGCAGG 6553696 Score = 104 bits (114), Expect = 3e-17 Identities = 88/107 (82%), Gaps = 5/107 (5%) Strand=Plus/Plus Query 188140 TGTCGCCACCATGGTCACACC-GAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTT 188194 |||||||||||||| || || || |||| | | | || |||||||||||| ||||| Sbjct 6541439 TGTCGCCACCATGGCCAGCCCAGACCCTCGGTACTCCTCCTTCTCCATCGAGGATGACTT 6541498 Query 188195 CAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGG 188241 |||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct 6541499 CAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTGCACATCCGAATGG 6541545 >seq9 Length=34412642 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| || ||||| ||||| || || | ||| || Sbjct 15801832 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTT 15801773 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| || |||||||| ||||| || |||||||| ||||||||||| Sbjct 15801772 AGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGGC 15801714 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 || |||||||| || ||||||||||||||||||||||| || || || || |||||| Sbjct 15797776 AAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGACGTGGGAGATAAAA 15797717 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 || || || |||| ||| || || ||||||| | || ||| || |||| Sbjct 15797716 TACTTCTCATCTGATGTAAGCTTGTTCCAATGAGGGAGATCCTTTGATA 15797668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629767820791440