Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq102 581 4e-161
seq87 318 8e-82
seq86 167 3e-36
seq88 125 9e-24
seq23 123 3e-23
>seq102
Length=10627846
Score = 581 bits (644), Expect = 4e-161
Identities = 1420/2138 (66%), Gaps = 34/2138 (2%)
Strand=Plus/Minus
Query 64863 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 64922
||| | || | || ||| ||||| || || || | ||| | |||| || || || | |
Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361
Query 64923 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 64982
||||| || ||||| ||| | || || || |||||||| |||| | | || ||||||
Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301
Query 64983 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 65040
|| ||||| || || || ||| || |||| || | || || || || | |||||||
Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241
Query 65041 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATGGATC 65097
| | || ||||||| | |||| | || || |||| | ||||| |||| || || |
Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181
Query 65098 CACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAA 65157
|| || |||||| || || | ||| |||||||| || | ||||| || | |
Sbjct 1347180 CATTGCATGAAATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGAT 1347121
Query 65158 CTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAA 65217
|| | || | || ||||| || | ||||||||||| ||||| ||||| | |||||| |
Sbjct 1347120 CTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGA 1347061
Query 65218 TATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 65277
| || ||||||||||||| ||||||||||| |||| || ||||||||||| ||||
Sbjct 1347060 TGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAG 1347001
Query 65278 TCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTA 65337
| ||||| | || | | |||||| ||||| | ||| || || || || | ||| |
Sbjct 1347000 TAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGA 1346941
Query 65338 GAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 65397
| ||| | | | ||| || || | || | ||| || || |
Sbjct 1346940 CAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGTACACCAG---AGGATTC 1346885
Query 65398 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 65457
|| ||| | || | |||| || || |||| || | | || ||||||||||
Sbjct 1346884 TTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCAC 1346825
Query 65458 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 65517
|||| || || | || || ||||||||| |||| || || | |||||| | || |
Sbjct 1346824 AACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGGG 1346765
Query 65518 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 65577
| || | || ||| | ||||| || | || ||||| || ||||| | ||||| || |
Sbjct 1346764 CATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCC 1346705
Query 65578 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 65637
|| | || || || ||| || ||| | || | | |||||||||||| | ||||
Sbjct 1346704 CAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAAT 1346646
Query 65638 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 65697
||||||| |||||||||| | || ||||| |||||| || || | ||
Sbjct 1346645 TAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCT 1346586
Query 65698 GAAAATCAAATCGCTCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATTAC 65754
||| ||| || | ||| | ||| |||| |||| || | || |||| ||||
Sbjct 1346585 TAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTAC 1346526
Query 65755 AAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 65812
|||| || ||||||| | || | ||| | || ||| || ||||| || || || ||
Sbjct 1346525 AAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTGCA 1346468
Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872
||||| ||||| | || || | || ||||| ||| | | |||||| || || ||
Sbjct 1346467 TTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCAT 1346408
Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCT 65931
| | ||||||| || || |||||| || | || || | ||| | | || | || |
Sbjct 1346407 GTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCT-GTGCTT 1346349
Query 65932 TTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCGAA 65986
||| | |||| | | || |||| ||| |||||| || || ||
Sbjct 1346348 TTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCAAA 1346294
Query 65987 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 66046
|| |||||||||| | |||| ||| || | |||| |||||| || | ||||| ||
Sbjct 1346293 TTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGTC 1346234
Query 66047 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATC 66106
| | || |||| |||||||||||||||| |||||||||| || | |||| ||
Sbjct 1346233 CTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTC 1346174
Query 66107 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 66166
|||| ||||| || || ||||| ||||| || | ||| |||||| | | || ||
Sbjct 1346173 CCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTC 1346114
Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 66226
| ||||||| || |||| ||| || || | || || || | ||||| || ||| ||
Sbjct 1346113 A-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGTC 1346055
Query 66227 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 66286
| || || | ||||| ||||| ||||||| ||| || | || | |||||| | ||
Sbjct 1346054 CACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGCC 1345995
Query 66287 ATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCC 66346
||| |||| | |||||||| ||| | || | ||| ||| | | | ||| |||||
Sbjct 1345994 ATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTCC 1345935
Query 66347 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 66406
||| || || || |||| ||| || | |||| |||||||| ||||| || |||||
Sbjct 1345934 CCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATACT 1345875
Query 66407 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 66466
||||| |||| | || || |||||||||| ||| | | | || || |||||
Sbjct 1345874 GTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATT 1345815
Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526
| | || || || || |||||||| || ||||| || || ||||| || |||||
Sbjct 1345814 GGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAAT 1345755
Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586
||| | || || || || ||||| || || | || | ||| ||||| || || ||
Sbjct 1345754 AGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTGG 1345695
Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646
||||||| | || || || |||||||| ||||| |||| || || |||||
Sbjct 1345694 TCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAACC 1345635
Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 66706
||| || || || || || |||| || || ||||| | || || || | ||| ||||
Sbjct 1345634 AAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTATT 1345575
Query 66707 TTTGTTAACTACATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTTTA 66764
|| | ||||| ||| | || | | || | || |||| ||||| | |
Sbjct 1345574 GGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTATGA 1345517
Query 66765 GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTG 66824
||||| | |||||| | | || |||||||| ||||| || | ||| || |||||||||
Sbjct 1345516 GGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTTG 1345457
Query 66825 TGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTA 66884
|| | || || || || | || || || |||||||| || || || | |||||
Sbjct 1345456 TGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTC 1345397
Query 66885 CAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATAT 66944
| || || |||||||| || |||| |||||| ||| || || || || ||| | |||
Sbjct 1345396 AAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTAT 1345337
Query 66945 ATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATC 66982
| || ||||| || | ||| | || | | ||||||
Sbjct 1345336 AAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATC 1345299
>seq87
Length=11743621
Score = 318 bits (352), Expect = 8e-82
Identities = 621/912 (68%), Gaps = 18/912 (2%)
Strand=Plus/Plus
Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867
|||| || ||| |||| | | |||| ||| ||| | | ||||| ||||| ||
Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163
Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927
| ||||| || | || ||||| || |||||| | ||||| ||| ||||| |
Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215
Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987
|||| || || |||||||| || | | | || ||||| |||| ||| || |
Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275
Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047
||| ||||| |||| | || || ||||| | |||||||||| ||||| |
Sbjct 8842276 GTCTCTCTGCTACAACG-CAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334
Query 36048 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106
| || || ||| ||| ||||||| | || | ||| || || || | | || ||
Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393
Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166
| ||||| | | || ||| | | || ||||| ||| | || | ||
Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453
Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226
|| ||||||| || ||| ||||| ||||| ||||| |||||| | ||||| || ||||||
Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513
Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286
| || || || || || || |||||||| ||||| || ||||||||||| |||||||||
Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573
Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 36343
| || |||||||| | | | || ||||| | | | | || ||||| |
Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633
Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403
|||||||| |||||||| ||||||||||||||||| || || ||||| |||||| |
Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT-TCAATGGCATTGAAGAGAAAC 8842692
Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463
| |||| || |||||||| || || ||| | | ||| | |||||||| |||||
Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752
Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523
|||||||| || || ||||| || || |||| ||| | || || |||||||| |||| |
Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812
Query 36524 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 36583
| |||||| | || |||||||||| ||| || || || |||||||| || |||
Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872
Query 36584 AATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCT 36643
| |||||| | |||||||| |||| || || | || | ||| | | || ||
Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932
Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703
|| || | ||||| || || | |||||||| || | ||| || || |||||||| | |
Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992
Query 36704 CAGATGTCATGA 36715
|| || ||||||
Sbjct 8842993 CAAATATCATGA 8843004
>seq86
Length=11983830
Score = 167 bits (184), Expect = 3e-36
Identities = 158/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290
|| |||||| | ||||||| | | ||||| |||| ||||||||||||||||||||||
Sbjct 6556957 TTTTTATTAACTGCTTCCAATAAACGCAACAGGTGCAGGAACAGATTGATGATATCCAAG 6556898
Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350
|| | |||| | || || | ||| |||||||| || ||| |||| || ||||||||
Sbjct 6556897 TAAAGGCTGATGGTAGCCAATATATACTCTTCAGGTGATAGCCTATGCATCAGTGAGTGA 6556838
Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410
||||||||||| |||||||| ||||| | |||||| || ||||| || |||||||||
Sbjct 6556837 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCCCCAGCAGCCAAAACCAGCTCC 6556778
Query 9411 ACTGTTTCACTTTGCACAAATA 9432
||||| ||||| | | |||||
Sbjct 6556777 ACTGTCTCACTATAAAAAAATA 6556756
Score = 129 bits (142), Expect = 8e-25
Identities = 100/119 (84%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|||||||||| ||| || ||||||||||| |||||||||||||||||||| | | |||||
Sbjct 6553696 CCTGCTCCAAATTTGCTAAAATCTCTCTTAGATTGTAGAGTATATGCAGTTAAACCAAGA 6553637
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| |||||||||||||| || |||||||| | || | | |||||||||||||| ||
Sbjct 6553636 AATACTGCAGTAGTCAGTATAAAAGCTTGTAGAATAATGTATACATCATAGAAAGTGAC 6553578
Score = 105 bits (116), Expect = 9e-18
Identities = 87/104 (84%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906
||||||| |||||||| |||||||| ||||| ||||||||||||||||||| |||||||
Sbjct 6541545 CCATTCGGATGTGCACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGA 6541486
Query 9907 TGGAGGAGCACGCGTA--GAGGCTC-GGCATGGCCATGGCGGCG 9947
||||| || | | ||| |||| || || ||||||||| ||||
Sbjct 6541485 TGGAGAAGGAGGAGTACCGAGGGTCTGGGCTGGCCATGGTGGCG 6541442
>seq88
Length=11737398
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 362945 CTGTTTCTTACACCATA 362961
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| ||||| || |||||||| || |||||| ||| | || || || |||||||| |
Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| ||| ||||||||||||||||| || || || || || ||||| || | || || |
Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076
|||| | |||||||| | || ||||||| | |||| | || || ||||
Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401
Score = 105 bits (116), Expect = 9e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| ||||||||||||||||||||| ||||||||||| || | |||| || |||| |
Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479
Query 66176 CGGTTCCAAGTATATGGC 66193
|| |||| ||| || ||
Sbjct 371480 AGGCTCCAGGTAAATAGC 371497
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || ||||| || | || || || ||||||||||| || || | || || |
Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||||||||| || || | |||||| | || || || | || ||||| ||||
Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | | || ||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 366667 ATTTATTTGA 366676
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| || | ||| || ||||||||||| | || || || || || || || || | |
Sbjct 385273 CACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 385332
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
||||||| || || || | ||||| | || || ||| |||| || |||| |||||| |
Sbjct 385333 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTA 385392
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964
||| || || || || ||| | |||| || ||||| || |||||
Sbjct 385393 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCAT 385438
>seq23
Length=24341844
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||| | ||| |||||||| ||||| || ||||||| || || || |
Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| ||||| || ||||| || ||||||||||| ||||||||||| || |||||||
Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162
Query 36300 CAATAAGTCTCTCTCC 36315
| | || | ||||||
Sbjct 8996163 CTACAACACGCTCTCC 8996178
Score = 104 bits (114), Expect = 3e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477
|||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574
Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537
||||| || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658120779667320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |