Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq102 581 4e-161 seq87 318 8e-82 seq86 167 3e-36 seq88 125 9e-24 seq23 123 3e-23 >seq102 Length=10627846 Score = 581 bits (644), Expect = 4e-161 Identities = 1420/2138 (66%), Gaps = 34/2138 (2%) Strand=Plus/Minus Query 64863 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 64922 ||| | || | || ||| ||||| || || || | ||| | |||| || || || | | Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361 Query 64923 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 64982 ||||| || ||||| ||| | || || || |||||||| |||| | | || |||||| Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301 Query 64983 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 65040 || ||||| || || || ||| || |||| || | || || || || | ||||||| Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241 Query 65041 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATGGATC 65097 | | || ||||||| | |||| | || || |||| | ||||| |||| || || | Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181 Query 65098 CACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAA 65157 || || |||||| || || | ||| |||||||| || | ||||| || | | Sbjct 1347180 CATTGCATGAAATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGAT 1347121 Query 65158 CTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAA 65217 || | || | || ||||| || | ||||||||||| ||||| ||||| | |||||| | Sbjct 1347120 CTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGA 1347061 Query 65218 TATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 65277 | || ||||||||||||| ||||||||||| |||| || ||||||||||| |||| Sbjct 1347060 TGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAG 1347001 Query 65278 TCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTA 65337 | ||||| | || | | |||||| ||||| | ||| || || || || | ||| | Sbjct 1347000 TAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGA 1346941 Query 65338 GAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 65397 | ||| | | | ||| || || | || | ||| || || | Sbjct 1346940 CAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGTACACCAG---AGGATTC 1346885 Query 65398 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 65457 || ||| | || | |||| || || |||| || | | || |||||||||| Sbjct 1346884 TTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCAC 1346825 Query 65458 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 65517 |||| || || | || || ||||||||| |||| || || | |||||| | || | Sbjct 1346824 AACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGGG 1346765 Query 65518 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 65577 | || | || ||| | ||||| || | || ||||| || ||||| | ||||| || | Sbjct 1346764 CATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCC 1346705 Query 65578 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 65637 || | || || || ||| || ||| | || | | |||||||||||| | |||| Sbjct 1346704 CAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAAT 1346646 Query 65638 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 65697 ||||||| |||||||||| | || ||||| |||||| || || | || Sbjct 1346645 TAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCT 1346586 Query 65698 GAAAATCAAATCGCTCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATTAC 65754 ||| ||| || | ||| | ||| |||| |||| || | || |||| |||| Sbjct 1346585 TAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTAC 1346526 Query 65755 AAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 65812 |||| || ||||||| | || | ||| | || ||| || ||||| || || || || Sbjct 1346525 AAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTGCA 1346468 Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872 ||||| ||||| | || || | || ||||| ||| | | |||||| || || || Sbjct 1346467 TTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCAT 1346408 Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCT 65931 | | ||||||| || || |||||| || | || || | ||| | | || | || | Sbjct 1346407 GTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCT-GTGCTT 1346349 Query 65932 TTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCGAA 65986 ||| | |||| | | || |||| ||| |||||| || || || Sbjct 1346348 TTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCAAA 1346294 Query 65987 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 66046 || |||||||||| | |||| ||| || | |||| |||||| || | ||||| || Sbjct 1346293 TTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGTC 1346234 Query 66047 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATC 66106 | | || |||| |||||||||||||||| |||||||||| || | |||| || Sbjct 1346233 CTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTC 1346174 Query 66107 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 66166 |||| ||||| || || ||||| ||||| || | ||| |||||| | | || || Sbjct 1346173 CCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTC 1346114 Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 66226 | ||||||| || |||| ||| || || | || || || | ||||| || ||| || Sbjct 1346113 A-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGTC 1346055 Query 66227 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 66286 | || || | ||||| ||||| ||||||| ||| || | || | |||||| | || Sbjct 1346054 CACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGCC 1345995 Query 66287 ATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCC 66346 ||| |||| | |||||||| ||| | || | ||| ||| | | | ||| ||||| Sbjct 1345994 ATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTCC 1345935 Query 66347 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 66406 ||| || || || |||| ||| || | |||| |||||||| ||||| || ||||| Sbjct 1345934 CCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATACT 1345875 Query 66407 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 66466 ||||| |||| | || || |||||||||| ||| | | | || || ||||| Sbjct 1345874 GTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATT 1345815 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526 | | || || || || |||||||| || ||||| || || ||||| || ||||| Sbjct 1345814 GGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAAT 1345755 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 ||| | || || || || ||||| || || | || | ||| ||||| || || || Sbjct 1345754 AGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTGG 1345695 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 ||||||| | || || || |||||||| ||||| |||| || || ||||| Sbjct 1345694 TCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAACC 1345635 Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 66706 ||| || || || || || |||| || || ||||| | || || || | ||| |||| Sbjct 1345634 AAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTATT 1345575 Query 66707 TTTGTTAACTACATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTTTA 66764 || | ||||| ||| | || | | || | || |||| ||||| | | Sbjct 1345574 GGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTATGA 1345517 Query 66765 GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTG 66824 ||||| | |||||| | | || |||||||| ||||| || | ||| || ||||||||| Sbjct 1345516 GGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTTG 1345457 Query 66825 TGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTA 66884 || | || || || || | || || || |||||||| || || || | ||||| Sbjct 1345456 TGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTC 1345397 Query 66885 CAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATAT 66944 | || || |||||||| || |||| |||||| ||| || || || || ||| | ||| Sbjct 1345396 AAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTAT 1345337 Query 66945 ATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATC 66982 | || ||||| || | ||| | || | | |||||| Sbjct 1345336 AAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATC 1345299 >seq87 Length=11743621 Score = 318 bits (352), Expect = 8e-82 Identities = 621/912 (68%), Gaps = 18/912 (2%) Strand=Plus/Plus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| |||| | | |||| ||| ||| | | ||||| ||||| || Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | ||||| || | || ||||| || |||||| | ||||| ||| ||||| | Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 |||| || || |||||||| || | | | || ||||| |||| ||| || | Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| ||||| |||| | || || ||||| | |||||||||| ||||| | Sbjct 8842276 GTCTCTCTGCTACAACG-CAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334 Query 36048 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106 | || || ||| ||| ||||||| | || | ||| || || || | | || || Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393 Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | ||||| | | || ||| | | || ||||| ||| | || | || Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 || ||||||| || ||| ||||| ||||| ||||| |||||| | ||||| || |||||| Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 | || || || || || || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 36343 | || |||||||| | | | || ||||| | | | | || ||||| | Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633 Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403 |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| | Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT-TCAATGGCATTGAAGAGAAAC 8842692 Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463 | |||| || |||||||| || || ||| | | ||| | |||||||| ||||| Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752 Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 |||||||| || || ||||| || || |||| ||| | || || |||||||| |||| | Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812 Query 36524 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 36583 | |||||| | || |||||||||| ||| || || || |||||||| || ||| Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872 Query 36584 AATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCT 36643 | |||||| | |||||||| |||| || || | || | ||| | | || || Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932 Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 || || | ||||| || || | |||||||| || | ||| || || |||||||| | | Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992 Query 36704 CAGATGTCATGA 36715 || || |||||| Sbjct 8842993 CAAATATCATGA 8843004 >seq86 Length=11983830 Score = 167 bits (184), Expect = 3e-36 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | ||||||| | | ||||| |||| |||||||||||||||||||||| Sbjct 6556957 TTTTTATTAACTGCTTCCAATAAACGCAACAGGTGCAGGAACAGATTGATGATATCCAAG 6556898 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 || | |||| | || || | ||| |||||||| || ||| |||| || |||||||| Sbjct 6556897 TAAAGGCTGATGGTAGCCAATATATACTCTTCAGGTGATAGCCTATGCATCAGTGAGTGA 6556838 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 ||||||||||| |||||||| ||||| | |||||| || ||||| || ||||||||| Sbjct 6556837 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCCCCAGCAGCCAAAACCAGCTCC 6556778 Query 9411 ACTGTTTCACTTTGCACAAATA 9432 ||||| ||||| | | ||||| Sbjct 6556777 ACTGTCTCACTATAAAAAAATA 6556756 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| || ||||||||||| |||||||||||||||||||| | | ||||| Sbjct 6553696 CCTGCTCCAAATTTGCTAAAATCTCTCTTAGATTGTAGAGTATATGCAGTTAAACCAAGA 6553637 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||||||||||||| || |||||||| | || | | |||||||||||||| || Sbjct 6553636 AATACTGCAGTAGTCAGTATAAAAGCTTGTAGAATAATGTATACATCATAGAAAGTGAC 6553578 Score = 105 bits (116), Expect = 9e-18 Identities = 87/104 (84%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| |||||||| ||||| ||||||||||||||||||| ||||||| Sbjct 6541545 CCATTCGGATGTGCACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGA 6541486 Query 9907 TGGAGGAGCACGCGTA--GAGGCTC-GGCATGGCCATGGCGGCG 9947 ||||| || | | ||| |||| || || ||||||||| |||| Sbjct 6541485 TGGAGAAGGAGGAGTACCGAGGGTCTGGGCTGGCCATGGTGGCG 6541442 >seq88 Length=11737398 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 362945 CTGTTTCTTACACCATA 362961 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| ||||||||||||||||| || || || || || ||||| || | || || | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 |||| | |||||||| | || ||||||| | |||| | || || |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 105 bits (116), Expect = 9e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || ||||||||||||||||||||| ||||||||||| || | |||| || |||| | Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 371480 AGGCTCCAGGTAAATAGC 371497 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || ||||| || | || || || ||||||||||| || || | || || | Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||||||||| || || | |||||| | || || || | || ||||| |||| Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 366667 ATTTATTTGA 366676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| || ||||||||||| | || || || || || || || || | | Sbjct 385273 CACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 385332 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| |||||| | Sbjct 385333 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTA 385392 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| || ||||| || ||||| Sbjct 385393 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCAT 385438 >seq23 Length=24341844 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||| ||||| || ||||||| || || || | Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| ||||||||||| || ||||||| Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162 Query 36300 CAATAAGTCTCTCTCC 36315 | | || | |||||| Sbjct 8996163 CTACAACACGCTCTCC 8996178 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658120779667320