Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq87 84.2 2e-11 >seq87 Length=11743621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| | | ||||| || | |||||||| || ||||| |||||||||| || Sbjct 8842587 GCCTTTGCCCCAATAGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGACTC 8842528 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| | ||||| || | | | |||||| || || |||||| | || || Sbjct 8842527 AAGAAACGAGGATTAATGCCTGGCCTCACATGTTCCAATGAATTCATTAGCAGAGATGAG 8842468 Query 22870 GGTCTACACTGTGACTTTGCTTGTAT 22895 || |||||||||||||| | || || Sbjct 8842467 AGTTTACACTGTGACTTTACCTGCAT 8842442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356206148082169