Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq35 84.2 2e-11 >seq35 Length=20596549 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163 ||| || ||||||||||||||||| || ||||| |||||||||||||||||| | ||||| Sbjct 8450828 AGGTGTCTACAAGGCCATGAGCGAATTTGACATCTTCATCAACTACATAGAAACCTACAT 8450887 Query 129164 GACTACTAA-ATAATAAA 129180 ||| | || |||| ||| Sbjct 8450888 GACAATGAAGATAAAAAA 8450905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447715010927760