Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq175 84.2 2e-11
>seq175
Length=5584636
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || |||| | || || |||| ||| || | |
Sbjct 1836492 GACTCCTTTTGAATGTTGTAGTCAAACAAAGTAGGTCCATCTTCCAGTTTTTTGCCAGCA 1836433
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | |||||| || |||| || |||||||| || ||| || |||||
Sbjct 1836432 AAGATCAGTCTCTGTTGATCAGGAGAAATTCCTTCTTTATCCTGGATCTTGGCTTTTACA 1836373
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| ||| | || || | | || |||| | || | || || || | || ||||||
Sbjct 1836372 TTTTCTATTGTATCTGAGGGTTCATCCTCAAGAGTGATGGTCTTCCCCATTAGGGTTTTT 1836313
Query 138601 ACAAAAATCTGCAT 138614
|||||||| |||||
Sbjct 1836312 ACAAAAATGTGCAT 1836299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496223176660560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |