Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq175 84.2 2e-11 >seq175 Length=5584636 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || |||| | || || |||| ||| || | | Sbjct 1836492 GACTCCTTTTGAATGTTGTAGTCAAACAAAGTAGGTCCATCTTCCAGTTTTTTGCCAGCA 1836433 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | |||||| || |||| || |||||||| || ||| || ||||| Sbjct 1836432 AAGATCAGTCTCTGTTGATCAGGAGAAATTCCTTCTTTATCCTGGATCTTGGCTTTTACA 1836373 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | || |||| | || | || || || | || |||||| Sbjct 1836372 TTTTCTATTGTATCTGAGGGTTCATCCTCAAGAGTGATGGTCTTCCCCATTAGGGTTTTT 1836313 Query 138601 ACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 1836312 ACAAAAATGTGCAT 1836299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496223176660560