Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq175 86.0 4e-12
>seq175
Length=5584636
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| ||||| || ||||| |||||||| || | | | | ||||| | ||
Sbjct 1836502 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAAACAAAGTAGGTCCATCTTCCAGTTT 1836443
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||||||| | |||| | |||||| || | ||||||||| || || || ||
Sbjct 1836442 TTTGCCAGCAAAGATCAGTCTCTGTTGATCAGGAGAAATTCCTTCTTTATCCTGGATCTT 1836383
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| ||||||| ||||||| ||||| ||| | || | || ||||| || || |
Sbjct 1836382 GGCTTTTACATTTTCTATTGTATCTGAGGGTTCATCCTCAAGAGTGATGGTCTTCCCCAT 1836323
Query 15153 CAGAGTTTTTACAAAAATTTGCATATT 15179
|| |||||||||||||| ||||| ||
Sbjct 1836322 TAGGGTTTTTACAAAAATGTGCATCTT 1836296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357364458814055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |