Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq175 86.0 4e-12 >seq175 Length=5584636 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| ||||| || ||||| |||||||| || | | | | ||||| | || Sbjct 1836502 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAAACAAAGTAGGTCCATCTTCCAGTTT 1836443 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | |||| | |||||| || | ||||||||| || || || || Sbjct 1836442 TTTGCCAGCAAAGATCAGTCTCTGTTGATCAGGAGAAATTCCTTCTTTATCCTGGATCTT 1836383 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | ||||||| ||||||| ||||| ||| | || | || ||||| || || | Sbjct 1836382 GGCTTTTACATTTTCTATTGTATCTGAGGGTTCATCCTCAAGAGTGATGGTCTTCCCCAT 1836323 Query 15153 CAGAGTTTTTACAAAAATTTGCATATT 15179 || |||||||||||||| ||||| || Sbjct 1836322 TAGGGTTTTTACAAAAATGTGCATCTT 1836296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357364458814055