Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq327 82.4 6e-11 >seq327 Length=991026 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 820 GCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGT 879 || |||||||| | || || || |||| | ||||||||| ||||||||||||| Sbjct 32780 GCCGTCCAGGTGCGCAGGTCCTCGTTCAGGGCAATGTAGTCGGCGCCATCATAGGCCCAC 32839 Query 880 TGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGG 939 ||| ||| || || |||||| || || |||||||| ||||||| ||||||| ||| Sbjct 32840 TGAGTGTACCCGCGGAGGAGGCGCCCGTCGGGCCCCACTTCACAGCCATACATCCACTGG 32899 Query 940 AGGGTATG 947 | ||| || Sbjct 32900 ATGGTGTG 32907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397716548979288