Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq102 444 7e-120 seq87 313 3e-80 seq23 116 4e-21 seq9 111 2e-19 seq88 98.7 1e-15 >seq102 Length=10627846 Score = 444 bits (492), Expect = 7e-120 Identities = 1227/1875 (65%), Gaps = 40/1875 (2%) Strand=Plus/Minus Query 46982 AGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAA 47041 ||| |||| ||||||||| | ||| | |||| | |||||||||||| |||||||| || Sbjct 1347445 AGTGAACTGGATTGGATTAGCCACTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAA 1347386 Query 47042 ACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAAT 47101 ||| |||| |||||||| | ||||||||| | ||| ||| |||| || | || Sbjct 1347385 ACCCTGCTTCCAGCCATAGAACTACATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGAT 1347326 Query 47102 ATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATC--AGCTGCCATATCT 47159 ||| || || ||| | || || |||||||| || || ||||| || |||| |||| | Sbjct 1347325 ATGGATGTTCAGACACTGGCTTTGATCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTG 1347266 Query 47160 AAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGG 47219 || || | || | || ||||| || || ||||||| ||| || | ||| || || Sbjct 1347265 AATATGGTTTTCTGAGAGATTTCCCACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGA 1347206 Query 47220 AGATTA-GTAT--TTTGAATAGATCCTCCgttttctataattttgttttttaa----ttc 47272 | | | |||| | || ||||| || | | ||||| | ||||||| | ||| Sbjct 1347205 ATTTCATGTATGCTCTGGATAGAGCCATTGCATGAAATAATCT-GTTTTTTCACCTCTTC 1347147 Query 47273 atttgaccaaagttttcgttcagtta-atgtttttaaAAGATGAGGATTAACAATTTGAA 47331 ||| || |||| | ||||| | || ||| ||| || ||||| ||||| |||| Sbjct 1347146 ATTCCAC--AAGTCC-CTCTCAGTAAGATCTTTCAGTAAG-TGGGGATTCACAATCTGAA 1347091 Query 47332 ATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCAT 47391 ||||||| || | ||||| | | || || || | ||||| ||||| | || |||| Sbjct 1347090 ATTCTCCTGACAAGACTCTGCAAGTGTAGATGTTGGTGGTATACGGTTCAGTGGACTCAT 1347031 Query 47392 TATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTC 47451 |||| || | || ||||||||||| || |||||||| |||| | ||| || |||| Sbjct 1347030 TATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCAGAGCAATAAGTAAACTGTTTC 1346971 Query 47452 TTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAA 47511 |||| ||||| ||| |||| ||||| | ||||| || |||| ||| Sbjct 1346970 TTACACCATACTTTGCAATCTTCTGTTTGACAAGTTTCTAGTCCCATAGGTCTGTAGGAT 1346911 Query 47512 CAACATTCCAA--AAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGT 47569 ||||||||| | | || | | |||| ||| || | ||||| | | ||| || Sbjct 1346910 -AACATTCCACGTACACCAGA-----GGATTCTTTTGCTGACTGGAGAGCACTCATAGGT 1346857 Query 47570 TTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATAT 47629 || ||| | || | | || || ||||||||||| ||||||| || | |||||| || Sbjct 1346856 TTCATATGAGCCATGTTCCTTGGCTAGTTCACAACTGGCTTCCAGGGCTCCATAATAAAT 1346797 Query 47630 TGTTTCAAATATTTTTATGTTTAGATTCCTTG-CTTCTGATGATTCAAAAGGATANNNNN 47688 ||||||| || | | || | || || | | |||| ||| ||||||| Sbjct 1346796 GATTTCAAAAATATGCTTATTCA-ATAACTGGGCATCTGGACTCTCAGAAGGATACTTCA 1346738 Query 47689 NNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTAT 47748 || | |||||||| ||||| || ||| | ||||| || ||| ||||| Sbjct 1346737 TCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAGTTCCAATGGGGTGATGGCTTTTAC 1346678 Query 47749 TAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNN 47808 | || ||| | |||||| | || | | || ||||| |||||||||| | Sbjct 1346677 TTGATAACAATG-TTCTGGAATAGGGTGGTAATTAATATCAGTAATTTTATTCAAGTTAT 1346619 Query 47809 NNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTA---TAA 47865 | ||| ||| || ||||| ||| | ||| | | | | Sbjct 1346618 GGACAACAACTTTGGTGACTTCAGCTAACTTCTTAAAGTCATATGTGTGTTCTGATGTGA 1346559 Query 47866 CAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTAT 47925 || || |||| || || | || || | ||||| || || ||||||| | |||||| Sbjct 1346558 CATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATCTTTGCTAGTAT 1346499 Query 47926 ATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTAT 47985 | | || |||||| | || || || | |||||||| || |||| || || | || Sbjct 1346498 ACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCCGGTTGC 1346439 Query 47986 TNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATT 48045 | ||| | | |||||||| ||||| | | || || || ||| |||||| | Sbjct 1346438 TCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTGTCTCTGCCTGAGACT 1346379 Query 48046 CAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTT 48105 || |||| | | ||||| | || |||| ||| | | | | | |||| Sbjct 1346378 CAGTGATGGCATACCAAAGCTGCTGTGCTTTTACAACTTTGCGGAC---ACGACCCTGTT 1346322 Query 48106 ---CGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGAC 48162 | || | | |||| |||||||||||| || || | | | ||| | ||| || Sbjct 1346321 TCTCATAACTTTTGTATAGCTTCTCAAATTCCTCTCCCCAAATCTCATCCAGGCCAAGAA 1346262 Query 48163 ATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATAT 48222 | ||||| |||||| || | ||||| |||| || | | | ||| ||||||| | || Sbjct 1346261 ACTCATTTGGACACCTCGAAGACCAGTCCTGATTAGTCTCCACTAGTTTCATAAAGAGAT 1346202 Query 48223 CTGGTATCCAAAGAGCTATAAATAAATCCCTAG--TTCTTAGTTCTTCATTGCCACTATT 48280 | | |||||||| || | |||| ||||| | | || ||||||| || || | || Sbjct 1346201 CCAGAATCCAAAGGGCAAGGAATAGGTCCCTGGCATGCT--GTTCTTCCTTCCCTGTGTT 1346144 Query 48281 CCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCAT 48340 | | || | ||||| || || | || ||| |||||| || || | || || || | Sbjct 1346143 CTTCTTTAAATCAAGGAACTCAAAGATGTCAA-ATGCCAAGGCTCCAGGTAAATAGCAAA 1346085 Query 48341 TACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCT 48400 |||||| |||| || || || || || | ||| || | || |||||||| ||||| Sbjct 1346084 TACACCGGGTCACTTGTTCCCACCCCAGTCCACATACCTTACTGTGTTGTTATACACTCT 1346025 Query 48401 TAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGC 48460 | ||| || |||| | ||| || | ||||| | || | |||||| || ||| |||| Sbjct 1346024 CAGCATAGGTACAAGGCTATTGGAATTGCCATTAATCCCAGCAATATAGCTGCCAGTAGC 1345965 Query 48461 TCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCG 48520 || ||| ||| | | || ||| || || || || || || ||||| |||||| | Sbjct 1345964 TCAGATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTGGAAATTAGTGCACACTG 1345905 Query 48521 TTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580 || || ||||||||||| ||||| ||||| |||||| ||||| | | || |||| || Sbjct 1345904 CTTTAGAGTATCATAAATGCCTTCAATACTGTCATCTTTCATACTCAGAAGGGAACAGCT 1345845 Query 48581 AGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCA 48640 ||| ||| || || || || | ||| | | || || |||||| ||||||| Sbjct 1345844 AGAACGTTGAGGGTGGTTGGTACCAGCATTGGAGGGCATGGGGGAGGCATGAGTAAACCA 1345785 Query 48641 TTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACC 48700 ||||| || | | || |||||||||||| ||| ||| || || || || || || Sbjct 1345784 ATTCTCAGAGAGAAGGTTGTATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCC 1345725 Query 48701 TATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAA 48760 | |||||| | ||| ||||||| ||| ||||||||| | ||| ||| || ||||| Sbjct 1345724 AACAGATACCCTCATCAACATATGTTGTGGTCTTTCAGCCCCTTTTCCATTGATCTTCAA 1345665 Query 48761 AAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATT 48820 | ||| || |||| ||| || |||||||| || || || || || || |||| Sbjct 1345664 CAAATAGGACCACTCCAGTGTCTTGAAACCAAAGTAATTATAAGAGAATTCTCAGTCATA 1345605 Query 48821 AATAATTGATGAATT 48835 ||||| | |||||| Sbjct 1345604 GATAATGGCTGAATT 1345590 >seq87 Length=11743621 Score = 313 bits (346), Expect = 3e-80 Identities = 623/914 (68%), Gaps = 18/914 (2%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAAT--TCATTACTCCCATT 18669 ||| || ||| ||||||| | ||||||||||||| || | | ||| ||||| || Sbjct 8842105 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCT--GTTGGGCTCGACATCACTCCTATC 8842162 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | || | ||||| || || ||||| |||||| | || || ||| ||| Sbjct 8842163 CTCTGGT--------ACTCTCTTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTC 8842214 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||||| ||| | ||| || || || || | ||| | | | Sbjct 8842215 TCCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATT 8842274 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || ||||| || ||| || ||||| | | |||||||||| || | Sbjct 8842275 AGTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGC 8842333 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGAT-ATAAT 18908 || ||| | | || || ||||| | || | |||||| | || || | | || || || Sbjct 8842334 TTCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCAT-TAATAATTAT 8842392 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||||| | || ||| || ||| | ||||| ||| | || | ||| Sbjct 8842393 TTCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAA 8842452 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||||| |||| | ||| ||||| || || |||||||| ||| |||| | |||||||| Sbjct 8842453 GTCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCAT 8842512 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 | ||||| ||| || | |||||||| || ||||| || ||||||||||| || ||||| Sbjct 8842513 TAATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTC 8842572 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 || || ||||| || || | | ||||| |||| || || | ||||| | Sbjct 8842573 TATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATG 8842632 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||||||| |||||||| |||||||| || || | ||| || ||| | Sbjct 8842633 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT-TCAATGGCATTGAAGAGAAA 8842691 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | | || | | |||||||| || | || | | | | |||||||||| ||||| Sbjct 8842692 CTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATG 8842751 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || || || || | ||| | |||||||| ||||| |||| Sbjct 8842752 TATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTG 8842811 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||||| | | ||| |||||||| | ||| ||||| || |||||||| || || Sbjct 8842812 TTGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGC 8842871 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAATAT 19447 | |||||| |||||| | |||| | | | || | | || ||| | | ||| | Sbjct 8842872 CAGAACATGTGATGTAAAATATCTTTC-TTTAGGCTTCAGGGCTTCCCAGTGCTGAATGT 8842930 Query 19448 CTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGT 19507 | || || | ||| | || ||| | |||||||| |||| ||| ||||| |||||||| | Sbjct 8842931 CCTTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCT 8842990 Query 19508 TCCATATATCACGA 19521 ||| |||||| || Sbjct 8842991 GCCAAATATCATGA 8843004 >seq23 Length=24341844 Score = 116 bits (128), Expect = 4e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | |||||| |||||||| | |||||||| | ||||| ||| | Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || |||||||| |||||||| | Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162 Query 19103 CAAC 19106 | || Sbjct 8996163 CTAC 8996166 Score = 100 bits (110), Expect = 3e-16 Identities = 111/146 (76%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAAT--TCATTACTCCCATT 18669 ||| || ||| ||||||| | ||||||||||||| || | | ||| |||||||| Sbjct 8994257 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCT--GTTGGGCTGGACATCACTCCCATC 8994314 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| || || |||| ||| ||| Sbjct 8994315 CTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAATATTC 8994374 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 |||||||| ||||| ||||||| ||| Sbjct 8994375 TCCATAAAGTCAAACGGATTTTCTAC 8994400 >seq9 Length=34412642 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | |||||||| || ||||| || ||| Sbjct 15801832 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTT 15801773 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 | ||||||||||| |||||| ||||| || ||||| || |||||||| || ||||| || Sbjct 15801772 AGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 15801713 Query 19105 ACTAGTCTTTCTCC 19118 || | ||||| || Sbjct 15801712 ACCACCCTTTCCCC 15801699 Score = 89.7 bits (98), Expect = 6e-13 Identities = 98/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393 |||||||| ||||| |||||||| || ||||||||||| ||||||||||| ||||| | Sbjct 15797787 AAAATCTT---ACCAAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 15797731 Query 19394 CATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAG 19453 | || ||||||| || |||||||| || | | ||||||| | | ||| || | Sbjct 15797730 CGTGGGAGATAAAATACTTCTCATCTGATGTAAGCTTGTTCCAATGAGGGAGATCCTTTG 15797671 Query 19454 ATAAATCTAC 19463 |||| || || Sbjct 15797670 ATAAGTCAAC 15797661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 ||||| || | ||||| ||||||||||||||| ||||| || ||||| || || |||| Sbjct 15817932 TGATACTCTGAAACTCGTTTTTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 15817873 Query 18733 ATAAAATCAAATGGATTTT 18751 ||||||||||| ||||||| Sbjct 15817872 ATAAAATCAAAGGGATTTT 15817854 >seq88 Length=11737398 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | ||||| || | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | ||||| ||||| ||||| || || || ||||| ||||||||||| | | || Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 |||| | || ||||| ||||| ||||||| ||| || | ||| || || Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGG 360399 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || | || || || || ||||| ||||| || || Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| || | || ||||||||||| || |||||||| | |||| | ||| || Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947 Query 47448 TTTCTTACTCCATA 47461 |||||||| ||||| Sbjct 362948 TTTCTTACACCATA 362961 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || || || |||||| ||||||| ||||| || | | || Sbjct 380517 GTACCAGCATTGAAGAGAGTGGGGGAGGCATGAGTAAACCACTTCTCAGAGAGAAGGTTG 380576 Query 48660 TATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 |||||||||||| ||| ||| || || || || || || | |||||| | ||| ||| Sbjct 380577 TATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAAC 380636 Query 48720 ATATATTGAGGTCTTTCA 48737 |||| ||| ||||||||| Sbjct 380637 ATATGTTGTGGTCTTTCA 380654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562064372325720