Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq26 125 9e-24 >seq26 Length=23966317 Score = 125 bits (138), Expect = 9e-24 Identities = 186/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 || || ||| | |||||||| || ||||| || ||| || ||||| || ||||| Sbjct 22114641 CCTGCTTCCTTAAGATGCTCTCTGCAAACTGACCAGGAAGTCTTGATTGTGACATGGCAG 22114582 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || ||| ||| | | |||||||| |||| ||| | ||||| |||||| || ||| Sbjct 22114581 AAAGTGAAGGCTACAAGCCCAGAAAACATGGTCACCTTCAGCAAGAACCACGGAGTTGTG 22114522 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 ||||||| || ||||| || || | || || || | || || ||||| | Sbjct 22114521 GTTCAGCCTACCTATAAGGACAGGGTAAACATCACACATCCGGGACTCAGAAACACAACC 22114462 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 |||| || |||||| | || ||||| ||||| || ||||||||||| || || ||||| Sbjct 22114461 TTAACCTTCTGGAATACCACCCTGGAGGATGAGGGGTGTTATATGTGCCTCTTCAATATC 22114402 Query 153985 TTCGGTTCTGGTAAGGTATCGGGA 154008 || |||||||| ||| | || ||| Sbjct 22114401 TTTGGTTCTGGGAAGATCTCAGGA 22114378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649247881014480