Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq175 87.8 2e-12 >seq175 Length=5584636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||||||||| ||| ||| || ||||| || || ||||| Sbjct 1836296 AAGATGCACATTTTTGTAAAAACCCTAATGGGGAAGACCATCACTCTTGAGGATGAACCC 1836355 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| || | | || | || || ||| || ||||| ||| | | ||| Sbjct 1836356 TCAGATACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTTCTCCTGAT 1836415 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||||||||| |||||||| |||||| || |||||||| ||| || || || Sbjct 1836416 CAACAGAGACTGATCTTTGCTGGCAAAAAACTGGAAGATGGACCTACTTTGTTTGACTAC 1836475 Query 28731 AACATTCAAAAAGAATCTACTCTGCA 28756 ||||||||||| || |||||||| || Sbjct 1836476 AACATTCAAAAGGAGTCTACTCTTCA 1836501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425372017641417