Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq198 96.9 5e-15 >seq198 Length=4684924 Score = 96.9 bits (106), Expect = 5e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| || || || |||||||| || |||||||| |||||||| | |||||||| | Sbjct 3118415 CACCATAGGGTGACCGGGGATAGAAGGGGGTGGTCTCCTTCTGTGGAATTTCTTGCACTT 3118474 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | |||||||||||||| || || ||||| |||| Sbjct 3118475 TCCCATAAAGTTCACTTGTTGAGGCTTGGTAGA 3118507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665441800986360