Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq88 91.5 2e-13 >seq88 Length=11737398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || || || || ||||| ||||||||| | ||||| |||||| Sbjct 370181 TCTCAGACAGAGACAGGTACCCCGTACATGCTCTACAAGGATTCCTGTAATCGGAAGAGC 370122 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| ||||||||||||| || || || ||||| ||||| ||||||| Sbjct 370121 AACCAGCAGAACCTGGGAACAATCAAATGCAGCAACCTGTGCACAGAAATAGTAGAGTAT 370062 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 370061 ACCAGCAAAGATGAG 370047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596522448630240