Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq40 104 7e-17
>seq40
Length=19935044
Score = 104 bits (114), Expect = 7e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || |||||||| ||||| || || ||||||| ||||| |||||
Sbjct 12068928 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCAATGAGCCCCTCACGACCCCCCATGGCATG 12068987
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
|||||| | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 12068988 GAAGAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 12069047
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||| ||| | ||| |||| | ||||| ||||| |||| || || | | || ||||
Sbjct 12069048 CTCAGGCCCGTAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTAAACCCAAATGG 12069107
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816
||| ||||| || || ||||||||||| ||
Sbjct 12069108 GATCCGCTTGCCCTCCACGTTCTGCTGCCC 12069137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471698362996851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |