Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq28 82.4 7e-11 >seq28 Length=23036994 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| |||||| || || || |||||||||||||| || ||||||| ||||| |||||| Sbjct 4630336 TCCTCTGGAACGTTCCATCCAGGGCGGCCACGATCACAGTCTTCCCAGCGTTGGCCATGG 4630277 Query 43927 CCTCGCAGAACTCCACTAGGTCG 43949 ||||| ||||||||| | |||| Sbjct 4630276 TCTCGCTGAACTCCACGATGTCG 4630254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476003974862040