Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 1e-13 >seq23 Length=24341844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 |||||||| ||||| || | || |||||| | ||| | |||||| |||| || || ||| Sbjct 8607246 TCTAGCATATGGGGACCGACATGTGATGGCCTTGATCGGATTGTTGAGCGCTGCGACCTG 8607305 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 ||||| | || ||||| || ||| | | |||||||||||||| ||||||| || | Sbjct 8607306 CCAGAAATGCATGTGGGTGATTGGATGCTGTTTGAAAACATGGGTGCTTACA-CTGTTGC 8607364 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCA 21274 ||| |||| || || || || |||| | |||| Sbjct 8607365 CGCTGCTTCTACTTTCAATGGGTTCCAGAGGCCA 8607398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463508962514640