Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 1e-12 >seq9 Length=34412642 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 ||||| |||||| ||| ||||| || ||||| || || |||| |||||| || ||| Sbjct 15801711 GTAGCCTTTGCTGCTGTAGAAGGGATTTTCTTCTCCGGATCTTTTGCTGCTATATTCTGG 15801770 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || |||||| | || | ||||||||||| | || |||||| || ||||| |||||| Sbjct 15801771 CTAAAGAAGAGAGGTCTTATGCCTGGACTTACTTTTTCCAATGAACTCATCAGCAGAGAT 15801830 Query 131984 GAAG 131987 |||| Sbjct 15801831 GAAG 15801834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186716652215403