Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq35 86.0 6e-12 >seq35 Length=20596549 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || ||||| ||||||||||||||||| || ||||||||||||||||||| Sbjct 8450815 AGCTCCAAGAGAAAGGTGTCTACAAGGCCATGAGCGAATTTGACATCTTCATCAACTACA 8450874 Query 133371 TAGAGACATATACCACCATGAA 133392 |||| || || | || ||||| Sbjct 8450875 TAGAAACCTACATGACAATGAA 8450896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447775806122280