Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq250 170 3e-36
seq180 170 3e-36
seq128 170 3e-36
seq115 167 3e-35
seq345 158 2e-32
seq40 86.0 9e-11
>seq250
Length=2905382
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 2629207 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2629260
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||| || |||
Sbjct 2629261 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCGTCCCGC 2629320
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2629321 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2629380
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 2629381 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2629429
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 2696537 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 2696590
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||| || |||
Sbjct 2696591 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCGTCCCGC 2696650
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 2696651 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 2696710
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 2696711 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2696759
>seq180
Length=5441683
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 823285 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 823338
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || || ||||| |||| ||||||| | |||||| ||||
Sbjct 823339 GGCATCATGAACTCCTTCGTTAATGACATCTTCGAGCGCATCGCGAGCGAGGCGTCTCGC 823398
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| |||||| | | |||||||||||||||||||||
Sbjct 823399 CTGGCGCATTACAACAAGCGCTCGACGATCTCGTCCAGAGAGATCCAGACCGCCGTGCGC 823458
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| || || ||||||| |||||||||||||||||||||||
Sbjct 823459 CTGCTGCTGCCGGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 823507
Score = 158 bits (174), Expect = 2e-32
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| || ||| |||| || |||| |||||
Sbjct 814669 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 814616
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| | || ||||||| ||||| ||||
Sbjct 814615 GGCATCATGAACTCGTTCGTCAACGACATTTTTGAGCGCATCGTGGGTGAGGCGTCTCGC 814556
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 814555 CTGGCGCATTACAACAAGCGCTCGACCATCACTTCCAGGGAGATCCAGACGGCCGTGCGC 814496
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 814495 CTGCTTCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCCGAGGGCACCA 814447
Score = 158 bits (174), Expect = 2e-32
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| || ||| |||| || |||| |||||
Sbjct 847096 TACAAGGTGCTGAAGCAGGTCCACCCTGACAC---TGG--CATC-TCGTCCAAGGCCATG 847149
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||||||||||||||| || | || ||||||| ||||| ||||
Sbjct 847150 GGCATCATGAACTCGTTTGTCAACGATATCTTTGAGCGCATCGCGGGTGAGGCGTCTCGC 847209
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| |||||| | | ||||||||||| |||||||||
Sbjct 847210 CTGGCGCATTACAACAAGCGCTCGACGATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 847269
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 847270 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCCGAGGGCACCA 847318
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| || ||||| |||||| |||| |||| || |||| |||||
Sbjct 875025 TACAAAGTGCTGAAACAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 875078
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||| | ||||| |||
Sbjct 875079 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATTGCTGGTGAGGCGTCACGC 875138
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| |||||| | | ||||||||||| |||||||||
Sbjct 875139 CTGGCGCATTACAACAAGCGCTCGACGATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 875198
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 875199 CTGCTTCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCCGAGGGCACCA 875247
Score = 143 bits (158), Expect = 4e-28
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| || || || ||| |||| || |||| |||||
Sbjct 860776 TACAAGGTGCTGAAGCAGGTTCATCCTGACAC---TGG--CATC-TCGTCCAAGGCCATG 860723
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||||||||||||||| || | || ||||||| ||||| ||||
Sbjct 860722 GGCATCATGAACTCGTTTGTCAACGATATCTTTGAGCGCATCGCGGGTGAGGCGTCTCGC 860663
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| || ||||||
Sbjct 860662 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCTAGGGAGATCCAGACGGCTGTGCGC 860603
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 860602 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCCGAGGGCACCA 860554
>seq128
Length=8436547
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| |||||||||||||| |||| |||| || |||| |||||
Sbjct 566464 TACAAAGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 566517
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| || ||||||| |||
Sbjct 566518 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAACGCATCGCCAGCGAGGCCTCCCGC 566577
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | | || ||| | ||||| || ||||||
Sbjct 566578 CTGGCGCACTACAACAAGCGCTCAACCATCACCTCCCGGGAGGTGCAGACGGCAGTGCGC 566637
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 566638 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 566686
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| |||||||||||||| |||| |||| || |||| |||||
Sbjct 571556 TACAAAGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 571503
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| || ||||||| |||
Sbjct 571502 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 571443
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | || ||| | ||||| || ||||||
Sbjct 571442 CTGGCGCATTACAACAAGCGCTCAACCATCACCTCCCGGGAGGTGCAGACGGCAGTGCGC 571383
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 571382 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 571334
>seq115
Length=9545123
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 8863622 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 8863675
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| ||||| ||||
Sbjct 8863676 GGCATCATGAACTCGTTTGTCAACGACATCTTCGAACGCATCGCGGGAGAGGCATCTCGC 8863735
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| |||||| | | ||||||||||| |||||||||
Sbjct 8863736 CTGGCGCATTACAACAAGCGCTCGACGATCACATCCAGGGAGATCCAGACGGCCGTGCGC 8863795
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| || || |||||||
Sbjct 8863796 CTACTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAAGGCACCA 8863844
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 8945156 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 8945209
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| | || ||||||| |||||| ||||
Sbjct 8945210 GGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGCATCGCAGGCGAGGCGTCTCGC 8945269
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| ||||||||
Sbjct 8945270 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGT 8945329
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 8945330 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 8945378
Score = 158 bits (174), Expect = 2e-32
Identities = 172/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || |||| |||||
Sbjct 8880666 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 8880719
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| ||||| ||||
Sbjct 8880720 GGCATCATGAACTCGTTTGTCAACGACATCTTCGAGCGCATCGCTGGTGAGGCGTCTCGC 8880779
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| |||||| | | ||||||||||| ||||||||
Sbjct 8880780 CTGGCGCATTACAACAAGCGCTCGACGATCACATCCAGGGAGATCCAGACGGCCGTGCGT 8880839
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | | | ||| || ||||||| ||||||||| |||||||||||
Sbjct 8880840 CTGCTGCTTCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 8880886
Score = 152 bits (168), Expect = 7e-31
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| | || ||||| || |||||
Sbjct 8816424 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCG---GCATTTCGTCCAA--AG-CCATG 8816371
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| ||||| ||||||||||| |||| ||||||| | |||||| ||||
Sbjct 8816370 GGTATCATGAATTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCTCGC 8816311
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 8816310 CTGGCGCATTACAACAAGCGCTCTACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 8816251
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 8816250 CTACTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 8816202
Score = 143 bits (158), Expect = 4e-28
Identities = 170/229 (74%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || |||| |||||
Sbjct 8847902 TACAAGGTGCTGAAGCAGGTCCACCCGGATACCGG-----CATC-TCGTCCAAGGCCATG 8847955
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||| | ||||| ||||
Sbjct 8847956 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATTGCTGGTGAGGCGTCTCGC 8848015
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| || ||||||
Sbjct 8848016 CTGGCGCATTACAACAAGCGCTCTACCATCACTTCCAGGGAGATCCAGACGGCAGTGCGC 8848075
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| || || ||||||| |||||| || |||||||||||||
Sbjct 8848076 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 8848124
Score = 125 bits (138), Expect = 1e-22
Identities = 166/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| || ||||| |||||| |||| ||| || |||| | |||
Sbjct 8891461 TACAAGGTGCTGAAACAGGTCCACCCCGACACCGG-----CATT-TCGTCCAAGGCTATG 8891408
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| |||||||| || | || ||||| | ||||| ||||
Sbjct 8891407 GGCATCATGAACTCGTTCGTCAACGATATTTTTGAGCGCATTGCAGGTGAGGCATCTCGC 8891348
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | | |||||||||| |||||| | | || |||||||| |||||||||
Sbjct 8891347 CTGGCCCATTACAACAAGCGCTCGACGATCACGTCCAGGGAAATCCAGACAGCCGTGCGC 8891288
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | | | ||| || ||||||| |||||| || |||||||||||||
Sbjct 8891287 CTGCTGCTTCCCGGGGAGCTGGCCAAGCACGCAGTGTCCGAGGGCACCA 8891239
Score = 118 bits (130), Expect = 2e-20
Identities = 169/233 (73%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
|||||||||||| |||||||| ||||| |||| | | | |||||||| | |||
Sbjct 133257 TCTACAAGGTGCAGAAGCAGGTCCACCC--GAACACTGGTATC-TCCTCCAA---GGCCA 133310
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| |||||||| || ||||| | ||||| |||| ||||| | ||||| |||
Sbjct 133311 TGAGCATCATGAATTCTTTTGTTACTGACATCTTCGAGCGCATAGCTGGTGAGGC--GTC 133368
Query 725032 GC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089
|| ||||||| || |||||||||| | ||| | | ||||| ||||| || ||
Sbjct 133369 GCACCTGGCGCACTACAACAAGCGCTCGGCCATCCCGTCCAGGGAGATTCAGACAGCTGT 133428
Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||||| | ||| ||| || ||||||| ||| |||| |||||||||||||
Sbjct 133429 GCGCCTGCTGCTGCCCGGGGAGCTGGCCAAACACACCGTGTCCGAGGGCACCA 133481
Score = 116 bits (128), Expect = 5e-20
Identities = 163/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|| |||||||| |||||||| ||||| |||| ||||| ||| | |||
Sbjct 8728969 TATAAGGTGCTGAAGCAGGTCCACCCTGACACCGGAATCTCATCC------AAGGCAATG 8728916
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|| ||||| || || ||||||||||| |||| ||||| | ||||| ||||
Sbjct 8728915 GGCATTATGAATTCCTTCGTCAACGACATCTTCGAGCGCATTGCTGGTGAGGCGTCTCGC 8728856
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || || | | | || ||||| || |||||||||
Sbjct 8728855 CTGGCGCACTACAACAAGCGCTCTACCATTACCTCCAGGGAAATCCAAACGGCCGTGCGC 8728796
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || |||||| |||||| || |||||||||||||
Sbjct 8728795 CTGCTGCTGCCCGGGGAGTTGGCCAAGCACGCTGTGTCCGAGGGCACCA 8728747
Score = 100 bits (110), Expect = 4e-15
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAAC 725057
||||| | || ||||||| |||||| ||||||||||| | ||||||||||
Sbjct 8957128 GACATCTTTGAGCGCATCGCAGGCGAGGCGTCTCGCCTGGCGCATTACAACAAGCGCTCG 8957187
Query 725058 ACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCC 725117
|| ||| | | ||||||||||| |||||||||||| | | | ||| ||| |||||
Sbjct 8957188 ACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTTCCCGGGGAATTGGCC 8957247
Query 725118 AGGCACGCCGTCTCCGAGGGCACCA 725142
| ||||||||| |||||||| ||||
Sbjct 8957248 AAGCACGCCGTGTCCGAGGGTACCA 8957272
Score = 87.8 bits (96), Expect = 3e-11
Identities = 164/235 (70%), Gaps = 12/235 (5%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||||||||||||||||||||| || || || | ||| || |||| ||| ||
Sbjct 176453 ATCTACAAGGTGCTCAAGCAGGTCCA-CCTGGA--CACTGGTATGTCTTCCA--AAG-CC 176400
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||| || ||||| | ||||| | || | ||| |||||| |
Sbjct 176399 ATGAGCATCATGAATTCTTTTGTTACTGACATCTTTGAGTGTATCTCAGGCGAGGCGTCT 176340
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087
| ||| ||| | ||||||||| | ||| || |||| | ||||| ||| | ||
Sbjct 176339 CAACTGACGCATTACAACAAGCG---CTCGACCGTCACGTCCAGAGAGATGCAGCCGGCG 176283
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| |||| | ||| || || ||||||| |||||| || || ||||||||||
Sbjct 176282 GTGCTCCTGCTTCTGCCGGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 176228
>seq345
Length=805940
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 115231 TACAAGGTGCTGAAGCAGGTTCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 115284
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| ||||| ||||
Sbjct 115285 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCTGGTGAGGCGTCTCGC 115344
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||||| | |||||||||| || ||| | | ||||||||||| ||||||||
Sbjct 115345 TTGGCGCATTACAACAAGCGCTCGACCATCACTTCCAGGGAGATCCAGACGGCCGTGCGT 115404
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 115405 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 115453
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| |||||||| ||||| |||| |||| || |||| |||||
Sbjct 131821 TACAAAGTGCTGAAGCAGGTCCACCCTGACACCGG-----CATC-TCGTCCAAGGCCATG 131874
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| |||| ||||||| ||||| ||||
Sbjct 131875 GGCATCATGAACTCATTTGTCAACGACATTTTCGAGCGCATCGCTGGTGAGGCGTCTCGC 131934
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| ||||||||
Sbjct 131935 CTGGCGCATTACAACAAGCGCTCAACCATCACGTCTAGGGAGATCCAGACGGCCGTGCGT 131994
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 131995 CTACTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 132043
>seq40
Length=19935044
Score = 86.0 bits (94), Expect = 9e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1818122 GGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGT 1818181
||||||||| |||| ||||||| | | |||||||||| ||||||| | ||| || |
Sbjct 12072232 GGGCACGCCAACCTGGTCAATGGAGAGGTTGGGGTCGGGGGTGATGACCGTGCGGGCTGA 12072291
Query 1818182 AAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCG 1818241
|||| ||| ||||||||||| || || || | | ||| ||||||||||| |||||
Sbjct 12072292 GAAGTCGACACGCTTGCCCATCAGGTTCCCTCGCACTCGGCCTTCCTTGCCCTTTAACCG 12072351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177201335028326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |