Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_027016.1
Length=226084
Score E
Sequences producing significant alignments: (Bits) Value
seq21 109 8e-19
>seq21
Length=24716270
Score = 109 bits (120), Expect = 8e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055
|||| || || || || || || |||||||||||||| || | | | | ||| | |
Sbjct 24232429 AGATAATCGATGGAGAGGTTTATCCTCCTACCGTCAAAGATACTCAGGCAGAGATGATCT 24232370
Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115
|| || || || || | | || || || |||| ||||| | ||||| || |
Sbjct 24232369 ACCCGCCTCATGTCCCTGAGCACCTGCGGTTTGCTGTGGGCCACGAGGTCTTTGGTCTGG 24232310
Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175
|||| ||| | ||| ||||||||| || ||||| | ||||| ||||| || ||||| |
Sbjct 24232309 TGCCTGGTCTGATGATGTACGCCACAATTTGGCTTCGGGAGCATAACAGAGTGTGCGATG 24232250
Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223
|||| ||||| ||||| || || ||| | || || ||| |||||||||
Sbjct 24232249 TGCTTAAACAGGAGCATCCAGAGTGGGATGATGAGCAGTTGTTCCAGA 24232202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723283628951520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |