Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq102 722 0.0 seq87 345 6e-90 seq23 141 1e-28 seq88 123 3e-23 seq9 116 5e-21 seq48 96.9 5e-15 >seq102 Length=10627846 Score = 722 bits (800), Expect = 0.0 Identities = 1443/2124 (68%), Gaps = 38/2124 (2%) Strand=Plus/Minus Query 68398 GGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGC 68457 ||| |||| | || ||| ||||| || || |||| ||| | |||| || ||||| | | Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361 Query 68458 ATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGA 68517 ||||| || ||||| ||| | || || || ||||| || |||| | || |||||| Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301 Query 68518 TCGATGAAAGCTCCTCTATCT--GCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCC 68575 || |||||||| ||||| ||| || |||| || | || | || |||| ||||||| Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241 Query 68576 AAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG-CTCGTAT--TTTGAATGGATC 68632 | | |||||| ||| || || | ||||| |||| | |||| | || || || | Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181 Query 68633 CAC--CATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 || ||| || ||||| || || | ||| ||||||||||| | ||||| || | Sbjct 1347180 CATTGCAT--GAAATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAG 1347123 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | || | || | || ||||| || || |||||||| || || || ||||| | |||||| Sbjct 1347122 ATCTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTA 1347063 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || ||||||| ||||| || |||||||| ||||| || ||||||||||| || Sbjct 1347062 GATGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGC 1347003 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 ||| ||||| | || | | |||||| ||||| | ||||| || || || | ||| Sbjct 1347002 AGTAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTT 1346943 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA-- 68928 | | ||||| | ||||| || || | || | ||||||||| |||| ||| Sbjct 1346942 GACAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCA-----CGTACACCAGAGG 1346889 Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 |||| || || | || | | ||| |||||||| | || | | | |||||| Sbjct 1346888 ATTCTTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGT 1346829 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 |||||||| || || | || || |||||||| |||| ||||| | |||||| | Sbjct 1346828 TCACAACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAAC 1346769 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 || || ||| |||| || | ||||| | | || ||||| |||||||||| || || Sbjct 1346768 TGGGCATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGT 1346709 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGC-TTCTGGAATAGGATA 69167 |||||| | || || || ||| || ||| |||| | || |||||||||||| | Sbjct 1346708 ACCCCAGTTCCAATGGGGTGATGGCTTTTACTTGA--TAACAATGTTCTGGAATAGGGTG 1346651 Query 69168 ATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAG 69227 ||||||||||| |||||||||| | || |||| || ||||| || || || Sbjct 1346650 GTAATTAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAA 1346591 Query 69228 TTTGAGAAAATCAAATC---GTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAG 69284 || ||| ||| || || | | | ||| |||||||||| || | || || | Sbjct 1346590 CTTCTTAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1346531 Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGC----ATATTGTATTATCTCTGTACATAGAT 69340 ||||||||||| ||||||| ||||| ||| | || ||| ||||| || || | Sbjct 1346530 GTTACAAACTGCAACCTCATC----TTTGCTAGTATACTCTACTATTTCTGTGCACAGGT 1346475 Query 69341 TACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGT 69400 | || |||||||| || ||||| || ||| | || ||||| ||| ||| ||||||| Sbjct 1346474 TGCTGCATTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGT 1346415 Query 69401 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCC 69460 | || || || ||||||| || || |||||| || | || | | ||||| | Sbjct 1346414 AGAGCATGTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCT 1346355 Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGA 69520 || |||| || | | ||| || ||| ||||| | | |||||| || | Sbjct 1346354 GTGCTTTTACAACTTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTCTCAA 1346295 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580 |||| |||||||||| ||||||| ||| || | |||||||||||| || | ||||| Sbjct 1346294 ATTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGT 1346235 Query 69581 CATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGAT 69640 | | || | || ||| |||||||||| ||||| |||||||||| || | || || | Sbjct 1346234 CCTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGT 1346175 Query 69641 CTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATAT 69700 | |||| | |||||| || ||||| || || || | ||| || ||||| | || | Sbjct 1346174 CCCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGT 1346115 Query 69701 CAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGAT 69760 || ||||||| || || || || || || | || || |||| || || || ||| | Sbjct 1346114 CA-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGT 1346056 Query 69761 CTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTAC 69820 | | || || | ||||| ||||| ||||||||||| || | || | ||| || || | Sbjct 1346055 CCACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGC 1345996 Query 69821 CATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTC 69880 |||| | |||| |||||| || || | || | ||| ||| | || | ||| |||| Sbjct 1345995 CATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTC 1345936 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || || || || ||||| ||||| | || | || ||||| || || || || | Sbjct 1345935 CCCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATAC 1345876 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 | |||||| |||| | ||||| |||||||||| |||| | || | || || |||| Sbjct 1345875 TGTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCAT 1345816 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | | | || || || ||||| ||||| || ||||| || || ||||||||||||| Sbjct 1345815 TGGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAA 1345756 Query 70061 TAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 |||| | || || || | ||||| || | | || | |||||||||||| || | Sbjct 1345755 TAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTG 1345696 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 ||| ||| || ||| ||| || ||||||| || || ||||| || || || | Sbjct 1345695 GTCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAAC 1345636 Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTAT 70240 |||| || || || || || |||| || || ||||| | ||||| || | ||| ||| Sbjct 1345635 CAAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTA- 1345577 Query 70241 ATTTGG---TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297 |||| || ||||||| | | | | || | || ||||| ||||| | Sbjct 1345576 --TTGGCCAAAATAATATCCAGTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTAT 1345519 Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357 |||||| | |||||| | | |||||||| || ||||| || | ||| || ||||| | Sbjct 1345518 GAGGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTT 1345459 Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417 |||| || || || | || | || ||||| | || ||||||||||| || | |||| Sbjct 1345458 TGTGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAG 1345399 Query 70418 TACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTAT 70477 | | || || |||||||| ||||| || || ||| ||| | ||| || || || | | Sbjct 1345398 TCAAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGT 1345339 Query 70478 ATAGCCCTTGAATAACTTTCATGG 70501 ||| || || || |||| ||||| Sbjct 1345338 ATAAGCCCTGGATTACTTCCATGG 1345315 >seq87 Length=11743621 Score = 345 bits (382), Expect = 6e-90 Identities = 625/911 (69%), Gaps = 16/911 (2%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 39326 |||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| || Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | ||||| || | |||||||| || |||||| | |||||| ||| ||||| | Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| ||||| | | | || || ||||| || | ||| || | Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| |||| | ||||| ||||| | |||||||||| || || | Sbjct 8842276 GTCTCTCTGCTACAACG-CAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566 | || | | ||||| || || | ||| | ||| || || || | | ||||| Sbjct 8842335 TCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATTT 8842394 Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626 | ||||| || || ||| || | || ||||| ||| || ||||| |||| Sbjct 8842395 CTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAGT 8842454 Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686 |||| |||| | ||||||||| ||||| ||||| || ||| ||||||| |||||||||| Sbjct 8842455 CACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATTA 8842514 Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746 || || || ||||| || ||||||| |||||||| |||||||||||||| ||||||| Sbjct 8842515 ATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTA 8842574 Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCT 39803 || ||||| || ||| | || || || | | || || | ||||| | | Sbjct 8842575 TTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGCA 8842634 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 |||||||| || |||||||||||||||||||||| ||| || ||||| |||||| | | Sbjct 8842635 AGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAGAGAAACT 8842693 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||| | |||||||| || || || | | ||| | |||||||| ||||| | Sbjct 8842694 CCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGTA 8842753 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 ||||||| || || || || || || || | ||| | ||||| ||||| || || | | Sbjct 8842754 TGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGTT 8842813 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 | ||||| || ||| |||||||||| ||| ||||| || || ||||| || |||| Sbjct 8842814 GGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCCA 8842873 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103 |||||| |||||||| |||| | || ||| | ||||| | || || | Sbjct 8842874 GAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCT 8842933 Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163 | || | ||| | || ||||| |||||||| || | ||| || || || ||||| | || Sbjct 8842934 TGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGCC 8842993 Query 40164 ATATATCACGA 40174 | |||||| || Sbjct 8842994 AAATATCATGA 8843004 >seq23 Length=24341844 Score = 141 bits (156), Expect = 1e-28 Identities = 113/136 (83%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| || ||||||||||| |||||||||| || || || | Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| |||||||||||||| |||||||| |||||||| | Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162 Query 39759 CAACAAGTCTCTCTCC 39774 | |||| | |||||| Sbjct 8996163 CTACAACACGCTCTCC 8996178 >seq88 Length=11737398 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| |||||||| || |||||| ||| | || || || ||||| || | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| || |||||||||||||||||||| ||||| || || ||||| || | || | | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 |||||| |||||||| | |||||| ||| || || | ||||| |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| |||||||| || || |||||||| ||||| | || Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| ||||| || ||||||||||| ||||| ||||| || || | | |||||| Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 362948 TTTCTTACACCAT 362960 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | ||| |||||||| || || | || | || ||||||||||| || || | Sbjct 366480 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGG 366539 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || || |||||||| ||||| ||||| | |||||| | || || ||| |||| || Sbjct 366540 GCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCA 366599 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || ||||| | || ||||| |||||||||| || || |||||||| || || || Sbjct 366600 AAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 366659 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| | |||||||| Sbjct 366660 CGATGGCATTTATTTGA 366676 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| || | ||| || ||||| ||||| || || || | || || || ||||| | Sbjct 385270 CACCACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 385329 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 | || ||||||||||| || | ||||| | || || ||| |||| ||||| || || | Sbjct 385330 GGATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGT 385389 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| || || || |||||||||| Sbjct 385390 CTAGTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCATGG 385440 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 |||||||||||||| ||||| ||||||||||| || | || || || |||| | | | Sbjct 371364 ACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACGCTGT 371423 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| || ||||| | || || ||||||| || Sbjct 371424 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 371483 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 371484 TCCAGGTAAATAGC 371497 Score = 86.0 bits (94), Expect = 9e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||||||| || ||||| ||||||||||| ||||||| |||||||| ||||||||||| Sbjct 370922 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGGCCAGGACACTCATTTGGACA 370981 Query 69567 CATCAATGACCA 69578 |||||| ||||| Sbjct 370982 CATCAAAGACCA 370993 >seq9 Length=34412642 Score = 116 bits (128), Expect = 5e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| || ||||||||||| ||||| | ||| || Sbjct 15801832 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTT 15801773 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| || Sbjct 15801772 AGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 15801713 Query 39761 AC 39762 || Sbjct 15801712 AC 15801711 >seq48 Length=17931790 Score = 96.9 bits (106), Expect = 5e-15 Identities = 243/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Minus Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGAT 37395 ||| ||| ||| || || ||||| ||| ||| | ||| | ||| |||||| | | Sbjct 14691142 TTAATTCTTTCCAGTGGAACCAAAACCTCCTGAACCCCTTTTGGTGT--CATCTAAAACT 14691085 Query 37396 TGTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCG 37455 || ||||| | | || |||||| | || |||| | | || ||||| || |||| ||| Sbjct 14691084 TGGACTTCCTCTATTTCTGGATAAAAAATTCGTTCACAAATAAGCTGTGCAATTCGATCA 14691025 Query 37456 CCCGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCC 37515 ||| | || | || ||| || ||| ||| ||| | ||| | | ||| ||| | Sbjct 14691024 CCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGCACAGCAGCAACATTTGCT 14690965 Query 37516 CTATAATCTTCATCGATTACTCCGCCTCCTACATCAAT---ACCTTTTAGAGACAAACCC 37572 ||||||||||||| || || || |||||||||| || ||||| || |||||| Sbjct 14690964 GTATAATCTTCATCTATGACACCATCTCCTACATCTATGAAGTGTTTTACAGCCAAACCA 14690905 Query 37573 GATCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTA 37632 || | ||||| |||||||||||| || | | |||| |||| || |||| Sbjct 14690904 GAACGTGGAGCCTCTCTTCCATAACACCCAGAAGGAAGGGCCATCTGAATGTCCATTTTC 14690845 Query 37633 ATCAATTGTCTTTCTCCA-GGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCC 37691 | | | || |||||||| || ||| || ||||| || || | || | ||||| || Sbjct 14690844 A-CGAGGGT-TTTCTCCATGGGTGGAACGTGTAATCATAGGCACCGTACAGGTCATAGCC 14690787 Query 37692 CGC 37694 ||| Sbjct 14690786 CGC 14690784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686854508445720