Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq102 84.2 3e-11
seq88 82.4 1e-10
>seq102
Length=10627846
Score = 84.2 bits (92), Expect = 3e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 111219 TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG 111278
|||||||| | ||||| | || ||||| || ||||| || |||||| || |
Sbjct 1346561 TGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATCTTTGCTAG 1346502
Query 111279 TGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 111338
| ||||||| |||||||| || | |||| | || ||||| |||| |||| |||
Sbjct 1346501 TATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCCGGT 1346442
Query 111339 TACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398
| |||||| || | | |||||||||||||||||| | || || ||||| | ||| |
Sbjct 1346441 TGCTCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTGTCTCTGCCTGAG 1346382
Query 111399 A 111399
|
Sbjct 1346381 A 1346381
>seq88
Length=11737398
Score = 82.4 bits (90), Expect = 1e-10
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || || ||||||| |||||||| || | |||| | || || || ||
Sbjct 370047 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCC 370106
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| |||| ||||| |||||| || || | |||||||||||||||||| || || ||
Sbjct 370107 CAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCCTTGTAGAGCATGTACGGGGTACC 370166
Query 111385 CGTCTCCGTCTGTGA 111399
||||| ||||| ||
Sbjct 370167 TGTCTCTGTCTGAGA 370181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627982361920800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |