Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq256 102 6e-17
seq4 84.2 2e-11
>seq256
Length=2651488
Score = 102 bits (112), Expect = 6e-17
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 111771 CTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAA 111830
|| ||| || |||||||||||||||||||| ||||| || ||| || || ||||| ||
Sbjct 779456 CTTCAAGCCGGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 779397
Query 111831 TGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTG 111890
||||| || |||||||| || || || || || || ||||| || || || | | |
Sbjct 779396 AGGCACCCCCAGGCCCATGTCGCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATT 779337
Query 111891 TGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|||||| || || ||||| | || || ||||||| ||||||
Sbjct 779336 CACCACATAGAACTGGCAAAGGGCGTGGCAGGGAGGCAGCGCCATC 779291
>seq4
Length=36583390
Score = 84.2 bits (92), Expect = 2e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 112170 ATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAA 112229
|| ||| ||||||||||| || || || | ||||| ||||| ||||||||| | |||
Sbjct 19717823 ATCCCAGATCTTCACTCCCTTGGAAGACAGTTCTCTAGCATTGGTGGATCCT-TGATACG 19717765
Query 112230 CCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289
||| ||||| ||||||||||| ||| | || |||| | || || || ||||| |||||
Sbjct 19717764 CCACAGCAACTCTTCCACAACACCTGTGCA-AACACACGCTTGGTTGTCAGCAGAGGAAA 19717706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391915396059649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |