Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq131 91.5 9e-14 >seq131 Length=8015323 Score = 91.5 bits (100), Expect = 9e-14 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 34561 TGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATC 34620 ||||| || ||||| || || | ||| ||||| || || | || ||||||||| |||| Sbjct 2520078 TGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATC 2520137 Query 34621 TTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACC 34679 ||| | || ||| | ||| ||||| | |||||| || | ||| || |||||||| Sbjct 2520138 TTT-GCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTACC 2520196 Query 34680 GGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||||||||| |||||||| Sbjct 2520197 CGTTAAGGTTTTCACAAAGATCTGCAT 2520223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314705346445259