Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq102 774 0.0
seq87 370 1e-97
seq88 138 2e-27
seq23 125 1e-23
seq48 105 9e-18
seq186 95.1 2e-14
seq9 84.2 3e-11
>seq102
Length=10627846
Score = 774 bits (858), Expect = 0.0
Identities = 1522/2229 (68%), Gaps = 30/2229 (1%)
Strand=Plus/Minus
Query 76767 TTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTAC 76826
|| ||||||| | || ||||| |||||| || | ||| |||| | || ||| |||
Sbjct 1347459 TTCTTCTTATTTAGAGTGAACTGGATTGGATTAGCCACTGGTCTTGTCCTTAAATAATAC 1347400
Query 76827 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAA 76886
|| ||||| || | |||| | |||| || ||||| | ||| || || ||||| |||
Sbjct 1347399 ATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTACATACTAGTGAGTTTCCCATAG 1347340
Query 76887 CTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC- 76945
|||| || || ||||| || |||| |||| |||||||| |||||||| ||||| ||
Sbjct 1347339 TTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGATCAATGAAAGCCCCTCTCTCT 1347280
Query 76946 -AGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 77004
||| |||| || | ||||| || |||| |||||||| | || || ||| ||| |
Sbjct 1347279 CAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCCACACCGTCTTATAAAGTTGCT 1347220
Query 77005 TGATATCATCTGGAAGGTT-TGTAT--TTTGAATGGAACCACCATCTGATATAAT-TGTA 77060
| | ||||| |||| | ||||| | || || || ||| ||| ||||| |||
Sbjct 1347219 TCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGCCATTGCATGAAATAATCTGTT 1347160
Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120
|| || | || ||||||||||| | |||||| || | | || | || | || |||||
Sbjct 1347159 TT-TTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGATCTTTCAGTAAGTGGGGATTC 1347101
Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180
|| || ||||||||||| ||||| ||||| | |||||| || || ||||||| |||||
Sbjct 1347100 ACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGATGTTGGTGGTATACGGTTCA 1347041
Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240
|| ||||| || |||| || |||||||| |||||||| ||||| | || | | |
Sbjct 1347040 GTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCAGAGCAATAAGT 1346981
Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300
||||| ||||| | ||||| || || || | ||| | | |||| | ||||| ||
Sbjct 1346980 AAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGACAAGTTTCTAGTCCCATAGG 1346921
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA--ATTCCGTTACTAGCATATGATC 77358
|||| ||| | ||||| ||| |||| ||| |||| || || | || |
Sbjct 1346920 TCTGTAGG-ATAACATTCCA-----CGTACACCAGAGGATTCTTTTGCTGACTGGAGAGC 1346867
Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418
| ||| |||||||| | || | | | |||||||||||||| ||||||| ||||
Sbjct 1346866 ACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCACAACTGGCTTCCAGGGCTC 1346807
Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478
| |||||||| |||| ||||| | |||||| | || || || ||| ||| | |
Sbjct 1346806 CATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGGGCATCTGGACTCTCAGAAG 1346747
Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538
|||| | | || ||||| |||||||| | || || || ||| | ||||| || ||
Sbjct 1346746 GATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAGTTCCAATGGGGTGAT 1346687
Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598
| || ||| | || | | |||||||||||| | |||||||| || |||||||||
Sbjct 1346686 GGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAATTAATATCAGTAATTTTAT 1346628
Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658
| | || ||||| ||||| || || || || ||| ||| || | |
Sbjct 1346627 TCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCTTAAAGTCATATGTGTGTT 1346568
Query 77659 CTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
|| | ||| |||| |||| || | || || | ||||||||||| |||||||
Sbjct 1346567 CTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATCTT 1346508
Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775
| | | ||| | || ||| || || || || || || |||||||| || ||||| || |
Sbjct 1346507 TGCTAGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCT 1346448
Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835
| |||||||||| ||| | || ||||| || || || || |||| || || ||
Sbjct 1346447 GCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTGTCTCTG 1346388
Query 77836 TCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGTAT-CG 77893
||| || || | || | | ||| | | || | ||||||| || | | | ||
Sbjct 1346387 CCTGAGACTCAGTGATGGCATACCAAAGCTGCTGT-GCTTTTA-CAACTTTGCGGACACG 1346330
Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953
| || | | ||||| | |||||| |||||||| |||||||||| |||||||
Sbjct 1346329 ACCCTGTTTCTCATAACTTTTGTATAGCTTCTCAAATTCCTCTCCCCAAATCTCATCCAG 1346270
Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013
||| | | |||||||| ||| || | |||||||| || || ||| |||||||
Sbjct 1346269 GCCAAGAAACTCATTTGGACACCTCGAAGACCAGTCCTGATTAGTCTCCACTAGTTTCAT 1346210
Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073
||||||||| | ||||| || |||| ||||| || | || |||||||| || ||
Sbjct 1346209 AAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTCCCTGGCATGCTGTTCTTCCTTCCC 1346150
Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133
||| ||||| || | ||| || ||||| | || ||| ||||||| || || || || ||
Sbjct 1346149 TGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCA-AATGCCAAGGCTCCAGGTAAAT 1346091
Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193
|| | || || |||| || || || ||| || | ||| || | ||||| |||||
Sbjct 1346090 AGCAAATACACCGGGTCACTTGTTCCCACCCCAGTCCACATACCTTACTGTGTTGTTATA 1346031
Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253
||||||| ||| || | || | || || | ||||| | |||| |||||| || ||
Sbjct 1346030 CACTCTCAGCATAGGTACAAGGCTATTGGAATTGCCATTAATCCCAGCAATATAGCTGCC 1345971
Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313
| | || | ||| ||| | | | || ||||| || || ||| || ||||| ||
Sbjct 1345970 AGTAGCTCAGATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTGGAAATTAGTGC 1345911
Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373
|| | || | ||||| || || || || ||||||||||| |||| | ||||| |
Sbjct 1345910 ACACTGCTTTAGAGTATCATAAATGCCTTCAATACTGTCATCTTTCATACTCAGAAGGGA 1345851
Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433
||||||||| |||| | || || || ||||| | | || || ||||| ||
Sbjct 1345850 ACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATTGGAGGGCATGGGGGAGGCATGAGT 1345791
Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493
|||||| || ||||| || || ||||||||||||||||| | || ||||| || ||
Sbjct 1345790 AAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAATAGCAGCATCAATGTCTTCTTTGTG 1345731
Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553
||| || || | ||| | |||||||||||| || ||||||||| || || ||| ||
Sbjct 1345730 AATCCCAACAGATACCCTCATCAACATATGTTGTGGTCTTTCAGCCCCTTTTCCATTGAT 1345671
Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613
|||||||| || || |||| || || |||||||| || || || || || ||||
Sbjct 1345670 CTTCAACAAATAGGACCACTCCAGTGTCTTGAAACCAAAGTAATTATAAGAGAATTCTCA 1345611
Query 78614 CTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTG--GTAACAATATCCATGACA 78671
|| || ||||| | ||||| || | ||||| |||| | || |||||||| |
Sbjct 1345610 GTCATAGATAATGGCTGAATTCAGGTGATCTT--TATTGGCCAAAATAATATCCAGTATT 1345553
Query 78672 GTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCT 78731
| | | | ||| | || ||| ||||| | |||||| | ||||| | | |||
Sbjct 1345552 GACCTGGCCACCATAAGGGAGCGTTTGCCATTATGAGGATTTATGTAGTTGTACAGGTCT 1345493
Query 78732 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTT 78791
||||| || ||||| || | ||| || ||||| ||||| | ||||| ||||| | |||
Sbjct 1345492 TCCATCACGTCACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAGTCCTT 1345433
Query 78792 GCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCT 78851
|| || | || ||||| ||||| || | ||||| | || || |||||||| || ||
Sbjct 1345432 GCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTCAAGGTCGCAGCTATTTCAGCAGCC 1345373
Query 78852 AAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCG 78911
||| | ||| || | ||| ||||||||| | |||| || || || |||| ||||| |
Sbjct 1345372 AAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTCCATGGTG 1345313
Query 78912 ATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCT-AATACGAGA 78970
|| | ||||||| ||||| || | || | |||| | || || |||| || | |||
Sbjct 1345312 ATCTAAGCAGGATCAACAAAGTCCATATTGAGTCCACAGCA-AAGCTTCTGGATTCAAGA 1345254
Query 78971 TGTGATTTT 78979
||||||||
Sbjct 1345253 AGTGATTTT 1345245
>seq87
Length=11743621
Score = 370 bits (410), Expect = 1e-97
Identities = 635/915 (69%), Gaps = 21/915 (2%)
Strand=Plus/Plus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || | |||| ||| ||| | | ||||| |||||
Sbjct 8842099 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCC 8842158
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
|| | || || || | |||||||| || |||||| | |||||| ||| ||
Sbjct 8842159 TATCCTCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAAT 8842210
Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965
||| |||||||| ||||||||||| || | | | | || ||||| || | |||
Sbjct 8842211 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAG 8842270
Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025
|| ||||| ||||| || || | || || ||||| | |||||||||| ||
Sbjct 8842271 CATTAGTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGAT 8842329
Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085
||| || || | | ||||| ||||| | ||| | ||| || | ||||||| | ||
Sbjct 8842330 AAGCTTCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAAT 8842389
Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145
||| | |||| | | ||| ||| | | ||| ||||| ||| || || |
Sbjct 8842390 TATTTCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGT 8842449
Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205
||| ||||| || | || |||||||| ||||| ||||| || ||| ||||||| || ||
Sbjct 8842450 AAAGTCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGG 8842509
Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265
||||| ||| ||||| ||||| || ||||| | || ||||| ||||||||||| || ||
Sbjct 8842510 CATTAATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCC 8842569
Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCT--CCGTAACTGGCTTCGTTGT---GTATC 48320
||||| | ||||| || || || | || || || | ||||| || | |||
Sbjct 8842570 TTCTATTGGGGCAAAGGC--TACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATC 8842627
Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380
|| | |||||||| ||||||||||||||||||||||||| ||| || ||||| |||
Sbjct 8842628 CAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAG 8842686
Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440
||||| | |||| ||| |||||||| |||||| || | | ||| | ||||||||
Sbjct 8842687 AGAAACTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCA 8842746
Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500
|| || || ||||| ||||| || || || || || | ||| | |||||||| |||||
Sbjct 8842747 GAATGTATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGA 8842806
Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560
|| | | |||||| | ||| || ||||| | ||| ||||| || || |||||
Sbjct 8842807 ACTTGTTGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAG 8842866
Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620
|| || | |||||| |||||||| |||| || | |||| | ||||| |
Sbjct 8842867 AAAGCCAGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGA 8842926
Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680
|| || || || | ||| | || ||||| |||||||| || | ||| ||||| ||||||
Sbjct 8842927 ATGTCCTTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATAC 8842986
Query 48681 ATATTCCATATATCA 48695
|| | ||| ||||||
Sbjct 8842987 ATCTGCCAAATATCA 8843001
>seq88
Length=11737398
Score = 138 bits (152), Expect = 2e-27
Identities = 133/171 (78%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| |||||||| ||||| || || |||||| ||| |||| || || ||||| || |
Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
||| ||||||||||||||||||||||| ||||| ||||| ||||| || | ||||| |
Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
|||||| |||||||| | || || ||| ||| || | ||||| ||||
Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401
Score = 118 bits (130), Expect = 1e-21
Identities = 106/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | ||
Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| || |||| || |||||||| |||||||| ||||| || || | | ||||||
Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 362948 TTTCTTACACCAT 362960
Score = 105 bits (116), Expect = 9e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || || || ||||| |||||||| || ||||| || || |||
Sbjct 380517 GTACCAGCATTGAAGAGAGTGGGGGAGGCATGAGTAAACCACTTCTCAGAGAGAAGGTTG 380576
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||||||||| | || ||||| || ||||| || || | ||| | |||||||
Sbjct 380577 TATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAAC 380636
Query 78519 ATATGCTGAGGTCTTTCAACC 78539
||||| || ||||||||| ||
Sbjct 380637 ATATGTTGTGGTCTTTCAGCC 380657
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|||||||||||||||||||| || ||||| || |||| ||||| || | || | |||
Sbjct 371364 ACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACGCTGT 371423
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| || ||||| | || || ||||||| ||
Sbjct 371424 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 371483
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || || || || | | ||||||||
Sbjct 371484 TCCAGGTAAATAGCAAATGCACCAGGTCG 371512
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413
|| || | ||| |||||||| || || | || || || ||||||||||| |||||||
Sbjct 366480 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTG-GCCAGTTCACAACTGGCTTCCAG 366538
Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473
||||| |||||||| ||||| ||||| | |||||| | || || || ||| ||
Sbjct 366539 GGCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTC 366598
Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
||| ||||| | || ||||| |||||||| | || || || ||||| ||||| ||
Sbjct 366599 AAAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 366658
Query 77534 TCTATGTCTCTTATTGGA 77551
| ||| | ||||| ||
Sbjct 366659 GCGATGGCATTTATTTGA 366676
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974
||||||| |||||||| ||||||||||| ||||||| ||||| || |||||||| ||
Sbjct 370922 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGGCCAGGACACTCATTTGGACA 370981
Query 77975 CATCAATGACCAGTC 77989
|||||| ||||||||
Sbjct 370982 CATCAAAGACCAGTC 370996
>seq23
Length=24341844
Score = 125 bits (138), Expect = 1e-23
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || ||||||||||| || ||||||| ||| ||||| |||
Sbjct 8996045 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCTTG 8996104
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||| | || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct 8996105 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGGC 8996163
Score = 86.0 bits (94), Expect = 9e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450
|||| ||| |||||||| |||||| || || | |||||||||||||| || || || |
Sbjct 8998505 TTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 8998564
Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505
|||| || || || || || || || ||||| | |||||||| ||||| || ||
Sbjct 8998565 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 8998619
>seq48
Length=17931790
Score = 105 bits (116), Expect = 9e-18
Identities = 179/257 (70%), Gaps = 7/257 (3%)
Strand=Plus/Minus
Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933
||||||||| ||||| ||| ||| | | |||| || |||||| | ||| ||||||
Sbjct 14691133 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTGGTGTCATCTAAAACTTGGACTTCC 14691076
Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993
| | || |||||| | || |||| | | || || || || |||| ||||||| | ||
Sbjct 14691075 TCTATTTCTGGATAAAAAATTCGTTCACAAATAAGCTGTGCAATTCGATCACCCTTTTTG 14691016
Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053
| |||||| | ||||| ||| ||| | ||| | | ||| | || ||||||||
Sbjct 14691015 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGCACAGCAGCAACATTTGCTGTATAATCT 14690956
Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110
|||||||| || || |||| ||||| || ||||| || || ||||| | |||
Sbjct 14690955 TCATCTATGACACCATCTCCTACATCTATGAAGTGTTTTACAGCCAAACCAGAACGTGGA 14690896
Query 46111 GCTATTCTTCCATAACA 46127
|| ||||||||||||
Sbjct 14690895 GCCTCTCTTCCATAACA 14690879
>seq186
Length=5153007
Score = 95.1 bits (104), Expect = 2e-14
Identities = 225/333 (68%), Gaps = 14/333 (4%)
Strand=Plus/Minus
Query 48117 TACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTA 48176
|| |||| |||||||| ||| ||| ||||| | | || | |||| ||||||| ||
Sbjct 2242595 TAGAACATGTGTTTAAAGGTTAGACAGGCAAAGTTAG--TGCAAACCT-CATCTCTGCTG 2242539
Query 48177 ATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATT 48236
| | || || ||||||| | || | ||||| || |||||||||| || |||||
Sbjct 2242538 GTAAGTTAATTGGAAAATGGAATCCCAGACATTAATCTTTGTTTTTTGAGGCAGAATATC 2242479
Query 48237 GCCGCGAAAGATCCAGAAAAGAATATGC-CTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295
|| | || ||||||| ||| || |||| || ||| |||| || || | |
Sbjct 2242478 TTTGCAAGAGCACCAGAAAGGAAGGTGTTCTTC-ACTGCCTCAAAGGCTACAACCCGTTT 2242420
Query 48296 TCCGTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACA 48355
||| | ||||| |||| || | || |||| ||||||||||||||| |
Sbjct 2242419 TCCAGGGGTAGCTTCTTTGT----CCCCAGTCAGGCCCTGTCAGCCTTCTTCTTTTCGTG 2242364
Query 48356 AGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGT 48415
|||||| |||| | |||| ||| |||||| || || ||| ||| || | ||||||
Sbjct 2242363 AGGCATCATTTCAAGGGCATCAAAAAGAAAG---TTCTCTTTGGAATCGTTCATGTAAGT 2242307
Query 48416 ATCTATTAAAAGACTATACATTTCGGAGTGAAT 48448
|| || || |||| |||||||| || || ||
Sbjct 2242306 GTCAATAAAGAGAC--TACATTTCAGAATGCAT 2242276
>seq9
Length=34412642
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697
||| ||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||
Sbjct 15794205 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCAGG 15794146
Query 48698 GTATTGGATTGGGAAAATAACAAA 48721
||| ||||| || || || |||||
Sbjct 15794145 GTACTGGATGGGAAAGATGACAAA 15794122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694613895114720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |