Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq102 774 0.0 seq87 370 1e-97 seq88 138 2e-27 seq23 125 1e-23 seq48 105 9e-18 seq186 95.1 2e-14 seq9 84.2 3e-11 >seq102 Length=10627846 Score = 774 bits (858), Expect = 0.0 Identities = 1522/2229 (68%), Gaps = 30/2229 (1%) Strand=Plus/Minus Query 76767 TTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTAC 76826 || ||||||| | || ||||| |||||| || | ||| |||| | || ||| ||| Sbjct 1347459 TTCTTCTTATTTAGAGTGAACTGGATTGGATTAGCCACTGGTCTTGTCCTTAAATAATAC 1347400 Query 76827 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAA 76886 || ||||| || | |||| | |||| || ||||| | ||| || || ||||| ||| Sbjct 1347399 ATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTACATACTAGTGAGTTTCCCATAG 1347340 Query 76887 CTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC- 76945 |||| || || ||||| || |||| |||| |||||||| |||||||| ||||| || Sbjct 1347339 TTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGATCAATGAAAGCCCCTCTCTCT 1347280 Query 76946 -AGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 77004 ||| |||| || | ||||| || |||| |||||||| | || || ||| ||| | Sbjct 1347279 CAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCCACACCGTCTTATAAAGTTGCT 1347220 Query 77005 TGATATCATCTGGAAGGTT-TGTAT--TTTGAATGGAACCACCATCTGATATAAT-TGTA 77060 | | ||||| |||| | ||||| | || || || ||| ||| ||||| ||| Sbjct 1347219 TCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGCCATTGCATGAAATAATCTGTT 1347160 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 || || | || ||||||||||| | |||||| || | | || | || | || ||||| Sbjct 1347159 TT-TTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGATCTTTCAGTAAGTGGGGATTC 1347101 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || ||||||||||| ||||| ||||| | |||||| || || ||||||| ||||| Sbjct 1347100 ACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGATGTTGGTGGTATACGGTTCA 1347041 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 || ||||| || |||| || |||||||| |||||||| ||||| | || | | | Sbjct 1347040 GTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCAGAGCAATAAGT 1346981 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 ||||| ||||| | ||||| || || || | ||| | | |||| | ||||| || Sbjct 1346980 AAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGACAAGTTTCTAGTCCCATAGG 1346921 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA--ATTCCGTTACTAGCATATGATC 77358 |||| ||| | ||||| ||| |||| ||| |||| || || | || | Sbjct 1346920 TCTGTAGG-ATAACATTCCA-----CGTACACCAGAGGATTCTTTTGCTGACTGGAGAGC 1346867 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418 | ||| |||||||| | || | | | |||||||||||||| ||||||| |||| Sbjct 1346866 ACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCACAACTGGCTTCCAGGGCTC 1346807 Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478 | |||||||| |||| ||||| | |||||| | || || || ||| ||| | | Sbjct 1346806 CATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGGGCATCTGGACTCTCAGAAG 1346747 Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 |||| | | || ||||| |||||||| | || || || ||| | ||||| || || Sbjct 1346746 GATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAGTTCCAATGGGGTGAT 1346687 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | || ||| | || | | |||||||||||| | |||||||| || ||||||||| Sbjct 1346686 GGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAATTAATATCAGTAATTTTAT 1346628 Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658 | | || ||||| ||||| || || || || ||| ||| || | | Sbjct 1346627 TCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCTTAAAGTCATATGTGTGTT 1346568 Query 77659 CTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715 || | ||| |||| |||| || | || || | ||||||||||| ||||||| Sbjct 1346567 CTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATCTT 1346508 Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775 | | | ||| | || ||| || || || || || || |||||||| || ||||| || | Sbjct 1346507 TGCTAGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCT 1346448 Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835 | |||||||||| ||| | || ||||| || || || || |||| || || || Sbjct 1346447 GCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTGTCTCTG 1346388 Query 77836 TCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGTAT-CG 77893 ||| || || | || | | ||| | | || | ||||||| || | | | || Sbjct 1346387 CCTGAGACTCAGTGATGGCATACCAAAGCTGCTGT-GCTTTTA-CAACTTTGCGGACACG 1346330 Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953 | || | | ||||| | |||||| |||||||| |||||||||| ||||||| Sbjct 1346329 ACCCTGTTTCTCATAACTTTTGTATAGCTTCTCAAATTCCTCTCCCCAAATCTCATCCAG 1346270 Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013 ||| | | |||||||| ||| || | |||||||| || || ||| ||||||| Sbjct 1346269 GCCAAGAAACTCATTTGGACACCTCGAAGACCAGTCCTGATTAGTCTCCACTAGTTTCAT 1346210 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 ||||||||| | ||||| || |||| ||||| || | || |||||||| || || Sbjct 1346209 AAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTCCCTGGCATGCTGTTCTTCCTTCCC 1346150 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||| ||||| || | ||| || ||||| | || ||| ||||||| || || || || || Sbjct 1346149 TGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCA-AATGCCAAGGCTCCAGGTAAAT 1346091 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | || || |||| || || || ||| || | ||| || | ||||| ||||| Sbjct 1346090 AGCAAATACACCGGGTCACTTGTTCCCACCCCAGTCCACATACCTTACTGTGTTGTTATA 1346031 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 ||||||| ||| || | || | || || | ||||| | |||| |||||| || || Sbjct 1346030 CACTCTCAGCATAGGTACAAGGCTATTGGAATTGCCATTAATCCCAGCAATATAGCTGCC 1345971 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | | || | ||| ||| | | | || ||||| || || ||| || ||||| || Sbjct 1345970 AGTAGCTCAGATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTGGAAATTAGTGC 1345911 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 || | || | ||||| || || || || ||||||||||| |||| | ||||| | Sbjct 1345910 ACACTGCTTTAGAGTATCATAAATGCCTTCAATACTGTCATCTTTCATACTCAGAAGGGA 1345851 Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433 ||||||||| |||| | || || || ||||| | | || || ||||| || Sbjct 1345850 ACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATTGGAGGGCATGGGGGAGGCATGAGT 1345791 Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 |||||| || ||||| || || ||||||||||||||||| | || ||||| || || Sbjct 1345790 AAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAATAGCAGCATCAATGTCTTCTTTGTG 1345731 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || || | ||| | |||||||||||| || ||||||||| || || ||| || Sbjct 1345730 AATCCCAACAGATACCCTCATCAACATATGTTGTGGTCTTTCAGCCCCTTTTCCATTGAT 1345671 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613 |||||||| || || |||| || || |||||||| || || || || || |||| Sbjct 1345670 CTTCAACAAATAGGACCACTCCAGTGTCTTGAAACCAAAGTAATTATAAGAGAATTCTCA 1345611 Query 78614 CTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTG--GTAACAATATCCATGACA 78671 || || ||||| | ||||| || | ||||| |||| | || |||||||| | Sbjct 1345610 GTCATAGATAATGGCTGAATTCAGGTGATCTT--TATTGGCCAAAATAATATCCAGTATT 1345553 Query 78672 GTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCT 78731 | | | | ||| | || ||| ||||| | |||||| | ||||| | | ||| Sbjct 1345552 GACCTGGCCACCATAAGGGAGCGTTTGCCATTATGAGGATTTATGTAGTTGTACAGGTCT 1345493 Query 78732 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTT 78791 ||||| || ||||| || | ||| || ||||| ||||| | ||||| ||||| | ||| Sbjct 1345492 TCCATCACGTCACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAGTCCTT 1345433 Query 78792 GCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCT 78851 || || | || ||||| ||||| || | ||||| | || || |||||||| || || Sbjct 1345432 GCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTCAAGGTCGCAGCTATTTCAGCAGCC 1345373 Query 78852 AAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCG 78911 ||| | ||| || | ||| ||||||||| | |||| || || || |||| ||||| | Sbjct 1345372 AAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTCCATGGTG 1345313 Query 78912 ATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCT-AATACGAGA 78970 || | ||||||| ||||| || | || | |||| | || || |||| || | ||| Sbjct 1345312 ATCTAAGCAGGATCAACAAAGTCCATATTGAGTCCACAGCA-AAGCTTCTGGATTCAAGA 1345254 Query 78971 TGTGATTTT 78979 |||||||| Sbjct 1345253 AGTGATTTT 1345245 >seq87 Length=11743621 Score = 370 bits (410), Expect = 1e-97 Identities = 635/915 (69%), Gaps = 21/915 (2%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| Sbjct 8842099 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCC 8842158 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 || | || || || | |||||||| || |||||| | |||||| ||| || Sbjct 8842159 TATCCTCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAAT 8842210 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 ||| |||||||| ||||||||||| || | | | | || ||||| || | ||| Sbjct 8842211 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAG 8842270 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || ||||| ||||| || || | || || ||||| | |||||||||| || Sbjct 8842271 CATTAGTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGAT 8842329 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 ||| || || | | ||||| ||||| | ||| | ||| || | ||||||| | || Sbjct 8842330 AAGCTTCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAAT 8842389 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145 ||| | |||| | | ||| ||| | | ||| ||||| ||| || || | Sbjct 8842390 TATTTCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGT 8842449 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||| ||||| || | || |||||||| ||||| ||||| || ||| ||||||| || || Sbjct 8842450 AAAGTCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGG 8842509 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||||| ||| ||||| ||||| || ||||| | || ||||| ||||||||||| || || Sbjct 8842510 CATTAATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCC 8842569 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCT--CCGTAACTGGCTTCGTTGT---GTATC 48320 ||||| | ||||| || || || | || || || | ||||| || | ||| Sbjct 8842570 TTCTATTGGGGCAAAGGC--TACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATC 8842627 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380 || | |||||||| ||||||||||||||||||||||||| ||| || ||||| ||| Sbjct 8842628 CAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAG 8842686 Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440 ||||| | |||| ||| |||||||| |||||| || | | ||| | |||||||| Sbjct 8842687 AGAAACTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCA 8842746 Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500 || || || ||||| ||||| || || || || || | ||| | |||||||| ||||| Sbjct 8842747 GAATGTATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGA 8842806 Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 || | | |||||| | ||| || ||||| | ||| ||||| || || ||||| Sbjct 8842807 ACTTGTTGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAG 8842866 Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620 || || | |||||| |||||||| |||| || | |||| | ||||| | Sbjct 8842867 AAAGCCAGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGA 8842926 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 || || || || | ||| | || ||||| |||||||| || | ||| ||||| |||||| Sbjct 8842927 ATGTCCTTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATAC 8842986 Query 48681 ATATTCCATATATCA 48695 || | ||| |||||| Sbjct 8842987 ATCTGCCAAATATCA 8843001 >seq88 Length=11737398 Score = 138 bits (152), Expect = 2e-27 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| ||||| || || |||||| ||| |||| || || ||||| || | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||||||||||||||||||||| ||||| ||||| ||||| || | ||||| | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 |||||| |||||||| | || || ||| ||| || | ||||| |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || |||||||| |||||||| ||||| || || | | |||||| Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 362948 TTTCTTACACCAT 362960 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || || || ||||| |||||||| || ||||| || || ||| Sbjct 380517 GTACCAGCATTGAAGAGAGTGGGGGAGGCATGAGTAAACCACTTCTCAGAGAGAAGGTTG 380576 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || ||||| || ||||| || || | ||| | ||||||| Sbjct 380577 TATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAAC 380636 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 380637 ATATGTTGTGGTCTTTCAGCC 380657 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 |||||||||||||||||||| || ||||| || |||| ||||| || | || | ||| Sbjct 371364 ACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACGCTGT 371423 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| || ||||| | || || ||||||| || Sbjct 371424 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 371483 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | | |||||||| Sbjct 371484 TCCAGGTAAATAGCAAATGCACCAGGTCG 371512 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 || || | ||| |||||||| || || | || || || ||||||||||| ||||||| Sbjct 366480 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTG-GCCAGTTCACAACTGGCTTCCAG 366538 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||||| |||||||| ||||| ||||| | |||||| | || || || ||| || Sbjct 366539 GGCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTC 366598 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| ||||| | || ||||| |||||||| | || || || ||||| ||||| || Sbjct 366599 AAAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 366658 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 366659 GCGATGGCATTTATTTGA 366676 Score = 86.0 bits (94), Expect = 9e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||||||| |||||||| ||||||||||| ||||||| ||||| || |||||||| || Sbjct 370922 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGGCCAGGACACTCATTTGGACA 370981 Query 77975 CATCAATGACCAGTC 77989 |||||| |||||||| Sbjct 370982 CATCAAAGACCAGTC 370996 >seq23 Length=24341844 Score = 125 bits (138), Expect = 1e-23 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||||||||| || ||||||| ||| ||||| ||| Sbjct 8996045 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCTTG 8996104 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| ||||||||||| || ||||||||||| ||||| || Sbjct 8996105 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGGC 8996163 Score = 86.0 bits (94), Expect = 9e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 |||| ||| |||||||| |||||| || || | |||||||||||||| || || || | Sbjct 8998505 TTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 8998564 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 |||| || || || || || || || ||||| | |||||||| ||||| || || Sbjct 8998565 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 8998619 >seq48 Length=17931790 Score = 105 bits (116), Expect = 9e-18 Identities = 179/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 ||||||||| ||||| ||| ||| | | |||| || |||||| | ||| |||||| Sbjct 14691133 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTGGTGTCATCTAAAACTTGGACTTCC 14691076 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || |||||| | || |||| | | || || || || |||| ||||||| | || Sbjct 14691075 TCTATTTCTGGATAAAAAATTCGTTCACAAATAAGCTGTGCAATTCGATCACCCTTTTTG 14691016 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | |||||| | ||||| ||| ||| | ||| | | ||| | || |||||||| Sbjct 14691015 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGCACAGCAGCAACATTTGCTGTATAATCT 14690956 Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| ||||| || ||||| || || ||||| | ||| Sbjct 14690955 TCATCTATGACACCATCTCCTACATCTATGAAGTGTTTTACAGCCAAACCAGAACGTGGA 14690896 Query 46111 GCTATTCTTCCATAACA 46127 || |||||||||||| Sbjct 14690895 GCCTCTCTTCCATAACA 14690879 >seq186 Length=5153007 Score = 95.1 bits (104), Expect = 2e-14 Identities = 225/333 (68%), Gaps = 14/333 (4%) Strand=Plus/Minus Query 48117 TACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTA 48176 || |||| |||||||| ||| ||| ||||| | | || | |||| ||||||| || Sbjct 2242595 TAGAACATGTGTTTAAAGGTTAGACAGGCAAAGTTAG--TGCAAACCT-CATCTCTGCTG 2242539 Query 48177 ATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATT 48236 | | || || ||||||| | || | ||||| || |||||||||| || ||||| Sbjct 2242538 GTAAGTTAATTGGAAAATGGAATCCCAGACATTAATCTTTGTTTTTTGAGGCAGAATATC 2242479 Query 48237 GCCGCGAAAGATCCAGAAAAGAATATGC-CTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295 || | || ||||||| ||| || |||| || ||| |||| || || | | Sbjct 2242478 TTTGCAAGAGCACCAGAAAGGAAGGTGTTCTTC-ACTGCCTCAAAGGCTACAACCCGTTT 2242420 Query 48296 TCCGTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACA 48355 ||| | ||||| |||| || | || |||| ||||||||||||||| | Sbjct 2242419 TCCAGGGGTAGCTTCTTTGT----CCCCAGTCAGGCCCTGTCAGCCTTCTTCTTTTCGTG 2242364 Query 48356 AGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGT 48415 |||||| |||| | |||| ||| |||||| || || ||| ||| || | |||||| Sbjct 2242363 AGGCATCATTTCAAGGGCATCAAAAAGAAAG---TTCTCTTTGGAATCGTTCATGTAAGT 2242307 Query 48416 ATCTATTAAAAGACTATACATTTCGGAGTGAAT 48448 || || || |||| |||||||| || || || Sbjct 2242306 GTCAATAAAGAGAC--TACATTTCAGAATGCAT 2242276 >seq9 Length=34412642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| ||||| |||||||| || ||||||| ||| ||||||||||| ||||| |||||| Sbjct 15794205 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCAGG 15794146 Query 48698 GTATTGGATTGGGAAAATAACAAA 48721 ||| ||||| || || || ||||| Sbjct 15794145 GTACTGGATGGGAAAGATGACAAA 15794122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694613895114720