Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq102 738 0.0 seq87 342 7e-89 seq88 132 7e-26 seq23 129 8e-25 seq9 107 3e-18 seq48 91.5 2e-13 >seq102 Length=10627846 Score = 738 bits (818), Expect = 0.0 Identities = 1529/2244 (68%), Gaps = 60/2244 (3%) Strand=Plus/Minus Query 75362 TTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTAC 75421 || ||||||| | |||||||| || ||| | ||||| |||| | || ||| ||| Sbjct 1347459 TTCTTCTTATTTAGAGTGAACTGGATTGGATTAGCCACTGGTCTTGTCCTTAAATAATAC 1347400 Query 75422 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAA 75481 || ||||| || | |||| | |||| || ||||| | ||| || || ||||| ||| Sbjct 1347399 ATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTACATACTAGTGAGTTTCCCATAG 1347340 Query 75482 CTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC- 75540 | || || || ||||| || |||| |||| |||||||| |||||||| ||||| || Sbjct 1347339 TTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGATCAATGAAAGCCCCTCTCTCT 1347280 Query 75541 -AGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 75599 ||| |||| || | ||||| || |||| |||||||| | || || ||| ||| | Sbjct 1347279 CAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCCACACCGTCTTATAAAGTTGCT 1347220 Query 75600 TGATATCATCTGGAAGATT-TGTAT--TTTGAATGGATCCGCCAT--CA-GATATAAT-T 75652 | | ||||| |||| | ||||| | || || || ||||| || || ||||| | Sbjct 1347219 TCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGA---GCCATTGCATGAAATAATCT 1347163 Query 75653 GTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGA 75712 || || || | ||| ||||||||||| | ||||| || | | || | || | || ||| Sbjct 1347162 GTTTT-TTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGATCTTTCAGTAAGTGGGGA 1347104 Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772 || ||||| ||||||||||| ||||| ||||| | |||||| || || ||||||| ||| Sbjct 1347103 TTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGATGTTGGTGGTATACGGT 1347044 Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832 || || ||||| || |||| || ||||||||||||||||| ||||| | || | Sbjct 1347043 TCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCAGAGCAATA 1346984 Query 75833 AATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAA 75892 | |||||| ||||| | ||||| || || || | ||| | | |||| | ||||| Sbjct 1346983 AGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGACAAGTTTCTAGTCCCAT 1346924 Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA--ATTCCGTTGCTAGCATATG 75950 || |||| || | ||||| ||| |||| ||| |||| ||||| | | Sbjct 1346923 AGGTCTGTAGG-ATAACATTCCA-----CGTACACCAGAGGATTCTTTTGCTGACTGGAG 1346870 Query 75951 ATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACG 76010 | | | ||| ||||| || | || | | | |||||||| ||||| || || | | Sbjct 1346869 AGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCACAACTGGCTTCCAGGG 1346810 Query 76011 CACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCA 76069 | || |||||||| |||| ||||| | |||||| || | || | || || |||| ||| Sbjct 1346809 CTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGG-GCATCTGGACTCTCA 1346751 Query 76070 AAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGT 76129 ||||||| | | || ||||| |||||||| || || || || ||| | ||||| || Sbjct 1346750 GAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAGTTCCAATGGGG 1346691 Query 76130 CTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATT 76189 ||| || ||| | || | | |||||||||||||| ||||||||||| ||||| Sbjct 1346690 TGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAATTAATATCAGTAATT 1346632 Query 76190 TTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTT 76249 ||||| | || |||||| ||||| || || || || ||| ||| || | Sbjct 1346631 TTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCTTAAAGTCATATGTG 1346572 Query 76250 CCATCTA---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCA 76306 ||| | ||| ||||||| || || | || || | |||||||| || |||||| Sbjct 1346571 TGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCA 1346512 Query 76307 T--TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAA 76364 | | || | | ||| | || ||| || ||||| || || || || ||||| ||||| | Sbjct 1346511 TCTTTGC--TAGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCA 1346454 Query 76365 GATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAG 76424 | || || |||||||||| ||| | || ||||| || || | || |||| || | Sbjct 1346453 GGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTG 1346394 Query 76425 TTTCAATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTG 76483 | || ||| || || | || | | ||| | | || | ||||||| | |||| Sbjct 1346393 TCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCTGT-GCTTTTACAAC---TTTG 1346338 Query 76484 TAT---CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA 76540 || || | | ||||| | | |||| | |||||||| |||||||||| Sbjct 1346337 CGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTCTCAAATTCCTCTCCCCAAATC 1346278 Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACC 76600 ||||||| ||| || | ||||| |||||| || | ||||| || || || || Sbjct 1346277 TCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGTCCTGATTAGTCTCCACT 1346218 Query 76601 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG--TTCTACGTT 76658 |||||||||||||||| | ||||| || |||| ||||| || | || | || ||| Sbjct 1346217 AGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTCCCTGGCATGCT--GTT 1346160 Query 76659 CTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTT 76718 |||| || ||||| ||||| || | ||| |||||||| | || ||| ||||||| || | Sbjct 1346159 CTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCA-AATGCCAAGGCT 1346101 Query 76719 CTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778 | || || || || | ||||| |||| || || || ||| || | ||| || | | Sbjct 1346100 CCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGTCCACATACCTTACTG 1346041 Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838 |||| ||||| ||||||| ||| || | || || || || | ||||| | |||| || Sbjct 1346040 TGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGCCATTAATCCCAGCAA 1345981 Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898 |||| || ||| || | ||| ||| | || | || ||||| || || || | Sbjct 1345980 TATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTGG 1345921 Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 | ||||| ||||| | || | || ||||| ||||| || ||||| ||||| |||| Sbjct 1345920 AAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATACTGTCATCTTTCATAC 1345861 Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018 | ||||| |||||||||| |||| | || || || ||||| | | || | Sbjct 1345860 TCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATTGGAGGGCATGGGGG 1345801 Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078 | |||||||| ||||| || ||||| || || ||||||||||||||| | || || || | Sbjct 1345800 AGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAATAGCAGCATCAATGT 1345741 Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 | || ||||| || |||| || | |||||||||||| || |||| ||| | | Sbjct 1345740 CTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTGGTCTTTCAGCCCCTT 1345681 Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 77198 | ||| || |||||||| || || |||| || || |||||||| || || || | Sbjct 1345680 TTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAACCAAAGTAATTATAAG 1345621 Query 77199 AAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG---TAACAA 77255 | || |||| || || ||||| | ||||| || | || ||| |||| || || Sbjct 1345620 AGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTA---TTGGCCAAAATAA 1345564 Query 77256 TATCCA----TGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACA 77311 |||||| |||| ||| |||| | || ||| | ||||| | |||||| | Sbjct 1345563 TATCCAGTATTGAC-CTGGCCACCATAA---GGGAGCGTTTGCCATTATGAGGATTTATG 1345508 Query 77312 TAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTC 77371 ||||| | | ||||||||| ||||| || || | ||| || ||||| ||||| | || Sbjct 1345507 TAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTA 1345448 Query 77372 GATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCT 77431 || || || | || || || | || ||||||||||| || | ||||| |||| || Sbjct 1345447 GAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTCAAGGTCGCA 1345388 Query 77432 GCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGA 77491 |||||||| || || ||||| ||| ||| | ||| || || || | |||| || || Sbjct 1345387 GCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTATAAGCCCTGG 1345328 Query 77492 ATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAAT 77551 || |||| ||||| || | |||||| ||||| || | || | ||| | || || Sbjct 1345327 ATTACTTCCATGGTGATCTAAGCAGGATCAACAAAGTCCATATTGAGTCCACAGCA-AAG 1345269 Query 77552 TTTCT-AATACGAGATGTGATTTT 77574 |||| || | ||| |||||||| Sbjct 1345268 CTTCTGGATTCAAGAAGTGATTTT 1345245 >seq87 Length=11743621 Score = 342 bits (378), Expect = 7e-89 Identities = 624/911 (68%), Gaps = 16/911 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 46339 |||| ||||| |||| || | |||| ||| ||| | | ||||| ||||| || Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | ||||| || | |||||||| || |||||| | |||||| ||| ||||| | Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||||||| ||||| ||||| || | | | || ||||| || | ||| || | Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 |||| ||||| || || | || ||| ||||| | |||||||||| || || | Sbjct 8842276 GTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCG 46579 | || | | ||||| ||||| | ||| | ||| || | ||||||| ||||| Sbjct 8842335 TCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATTT 8842394 Query 46580 ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAAT 46639 | ||||| | | ||| ||| || | ||| ||||| ||| || || | ||| | Sbjct 8842395 CTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAGT 8842454 Query 46640 CACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTA 46699 |||| || | | |||||||| ||||| ||||| || ||| ||||||| |||||||||| Sbjct 8842455 CACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATTA 8842514 Query 46700 GTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 46759 ||| || || ||||| || ||||| | || ||||| ||||||||||| || ||||||| Sbjct 8842515 ATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTA 8842574 Query 46760 CAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTTT 46816 | || || || ||| | || || || | || || || | ||||| Sbjct 8842575 TTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGCA 8842634 Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876 |||||||| ||||| ||||||||||||||||||| ||| || ||||| |||||||| | Sbjct 8842635 AGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAGAGAAACT 8842693 Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936 |||| | |||||||| || || || | | ||| | |||||||| ||||| | Sbjct 8842694 CCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGTA 8842753 Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996 ||||||| || || || || || || || | ||| | ||||| |||||||| || | | Sbjct 8842754 TGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGTT 8842813 Query 46997 TACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCA 47056 | |||||| | ||| || ||||||| ||| ||||| || || ||||| || |||| Sbjct 8842814 GGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCCA 8842873 Query 47057 ATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTT 47116 |||||| |||||||| |||| | | |||| | ||||| | || || | Sbjct 8842874 GAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCT 8842933 Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176 | || | ||| | || ||||| ||||| || || | ||| ||||| |||||||| | || Sbjct 8842934 TGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGCC 8842993 Query 47177 ATATATCACGA 47187 | |||||| || Sbjct 8842994 AAATATCATGA 8843004 >seq88 Length=11737398 Score = 132 bits (146), Expect = 7e-26 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| ||||| || || |||||| ||| | || || || ||||| || | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| ||||||||||||||||||||||| ||||| ||||| ||||| || | ||||| | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 |||||| |||||||| | || || ||| ||| || | ||||| |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 123 bits (136), Expect = 4e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| || ||||||||||||||||| ||||| || || | | |||||| Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 362948 TTTCTTACACCAT 362960 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || ||||||||||||||||| || ||||| || |||| ||||| || | || | || Sbjct 371364 ACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACGCTGT 371423 Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 371424 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 371483 Query 76718 TCTAGATATATCGCCATAACACCCGGTCG 76746 || || || || || | |||| ||||| Sbjct 371484 TCCAGGTAAATAGCAAATGCACCAGGTCG 371512 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || || || |||||||| ||||| || ||||| || || ||| Sbjct 380517 GTACCAGCATTGAAGAGAGTGGGGGAGGCATGAGTAAACCACTTCTCAGAGAGAAGGTTG 380576 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || || || || ||||| || |||| || | ||||||| Sbjct 380577 TATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAAC 380636 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||| || |||| ||| Sbjct 380637 ATATGTTGTGGTCTTTC 380653 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || || | ||| ||||| || | || | || | || ||||| ||||| || || | Sbjct 366480 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGG 366539 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATC 76068 || || |||||||| ||||| ||||| | |||||| || | || | || || |||| || Sbjct 366540 GCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGG-GCGTCTGGACTCTC 366598 Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 ||||||||| | || ||||| |||||||| || || || || ||||| ||||| || Sbjct 366599 AAAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 366658 Query 76129 TCTATGTCTCTTATTGGA 76146 | ||| | ||||| || Sbjct 366659 GCGATGGCATTTATTTGA 366676 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| || ||||| ||||| | || || || || || || || || || || Sbjct 385275 CTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGATG 385334 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || ||||| |||| | Sbjct 385335 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTAGT 385394 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | ||| || || || | |||| || || || |||||||||| Sbjct 385395 TCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCATGG 385440 >seq23 Length=24341844 Score = 129 bits (142), Expect = 8e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || |||||||||||||||||||||| ||| || || ||| Sbjct 8996045 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCTTG 8996104 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || |||||||| || || || || Sbjct 8996105 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGGCT 8996164 Query 46774 ACAAGTCTCTCTCC 46787 |||| | |||||| Sbjct 8996165 ACAACACGCTCTCC 8996178 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||||| || || || || | |||||||||||||| ||||| |||||||| || || Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || || || || || ||||| | ||||| |||||||| || ||| | |||||| || Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634 >seq9 Length=34412642 Score = 107 bits (118), Expect = 3e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| || || |||||||| || || | ||| | Sbjct 15801834 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 15801775 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || | Sbjct 15801774 TTAGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGG 15801715 Query 46772 CGAC 46775 | || Sbjct 15801714 CTAC 15801711 Score = 89.7 bits (98), Expect = 7e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || |||| ||| ||||||||||| ||||| |||||| | Sbjct 15794205 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCAGG 15794146 Query 47187 ATATTGGATCGGAAAAATAACAAA 47210 || ||||| ||||| || ||||| Sbjct 15794145 GTACTGGATGGGAAAGATGACAAA 15794122 >seq48 Length=17931790 Score = 91.5 bits (100), Expect = 2e-13 Identities = 240/359 (67%), Gaps = 18/359 (5%) Strand=Plus/Minus Query 44363 TCCCGTTGATCCAAATCCT--TGAGCGTCTCTATTGGTACTATCTAGAGATTGTACTTCC 44420 ||| || || ||||| ||| ||| | | || ||||| ||||| | ||| |||||| Sbjct 14691133 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTGGTGTCATCTAAAACTTGGACTTCC 14691076 Query 44421 TCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCTGTATTT 44480 |||| || |||||| | || |||| | | || || || || |||| |||||| | || Sbjct 14691075 TCTATTTCTGGATAAAAAATTCGTTCACAAATAAGCTGTGCAATTCGATCACCCTTTTTG 14691016 Query 44481 ATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCCCCTATAATCT 44540 | || ||| | ||||| ||| ||| | || | | ||| || | |||||||| Sbjct 14691015 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGCACAGCAGCAACATTTGCTGTATAATCT 14690956 Query 44541 TCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAGAGAAAGACCCGATCTAGGC 44597 |||||||| || ||| |||| ||||| || ||||| || | ||| || | || Sbjct 14690955 TCATCTATGACACCATCTCCTACATCTATGAAGTGTTTTACAGCCAAACCAGAACGTGGA 14690896 Query 44598 GCTATTCTTCCATAA----CAGAATTTTGGCATAGACATACGAATATCTGTTTTAATCAA 44653 || |||||||||| ||||| || | | ||| |||| || |||| | | | Sbjct 14690895 GCCTCTCTTCCATAACACCCAGAA----GGAAGGGCCATCTGAATGTCCATTTTCA-CGA 14690841 Query 44654 CCGTCTTTCTCCA-GGAGGGATAGTATAATCGTAAGCACTGTATAAATCATATCCTGCC 44711 || |||||||| || ||| || ||||| || |||| ||| | ||||| || ||| Sbjct 14690840 GGGT-TTTCTCCATGGGTGGAACGTGTAATCATAGGCACCGTACAGGTCATAGCCCGCC 14690783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712878051447360