Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq102 738 0.0
seq87 342 7e-89
seq88 132 7e-26
seq23 129 8e-25
seq9 107 3e-18
seq48 91.5 2e-13
>seq102
Length=10627846
Score = 738 bits (818), Expect = 0.0
Identities = 1529/2244 (68%), Gaps = 60/2244 (3%)
Strand=Plus/Minus
Query 75362 TTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTAC 75421
|| ||||||| | |||||||| || ||| | ||||| |||| | || ||| |||
Sbjct 1347459 TTCTTCTTATTTAGAGTGAACTGGATTGGATTAGCCACTGGTCTTGTCCTTAAATAATAC 1347400
Query 75422 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAA 75481
|| ||||| || | |||| | |||| || ||||| | ||| || || ||||| |||
Sbjct 1347399 ATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTACATACTAGTGAGTTTCCCATAG 1347340
Query 75482 CTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC- 75540
| || || || ||||| || |||| |||| |||||||| |||||||| ||||| ||
Sbjct 1347339 TTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGATCAATGAAAGCCCCTCTCTCT 1347280
Query 75541 -AGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 75599
||| |||| || | ||||| || |||| |||||||| | || || ||| ||| |
Sbjct 1347279 CAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCCACACCGTCTTATAAAGTTGCT 1347220
Query 75600 TGATATCATCTGGAAGATT-TGTAT--TTTGAATGGATCCGCCAT--CA-GATATAAT-T 75652
| | ||||| |||| | ||||| | || || || ||||| || || ||||| |
Sbjct 1347219 TCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGA---GCCATTGCATGAAATAATCT 1347163
Query 75653 GTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGA 75712
|| || || | ||| ||||||||||| | ||||| || | | || | || | || |||
Sbjct 1347162 GTTTT-TTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAGATCTTTCAGTAAGTGGGGA 1347104
Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772
|| ||||| ||||||||||| ||||| ||||| | |||||| || || ||||||| |||
Sbjct 1347103 TTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTAGATGTTGGTGGTATACGGT 1347044
Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832
|| || ||||| || |||| || ||||||||||||||||| ||||| | || |
Sbjct 1347043 TCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCAGAGCAATA 1346984
Query 75833 AATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAA 75892
| |||||| ||||| | ||||| || || || | ||| | | |||| | |||||
Sbjct 1346983 AGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTTGACAAGTTTCTAGTCCCAT 1346924
Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA--ATTCCGTTGCTAGCATATG 75950
|| |||| || | ||||| ||| |||| ||| |||| ||||| | |
Sbjct 1346923 AGGTCTGTAGG-ATAACATTCCA-----CGTACACCAGAGGATTCTTTTGCTGACTGGAG 1346870
Query 75951 ATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACG 76010
| | | ||| ||||| || | || | | | |||||||| ||||| || || | |
Sbjct 1346869 AGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTCACAACTGGCTTCCAGGG 1346810
Query 76011 CACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCA 76069
| || |||||||| |||| ||||| | |||||| || | || | || || |||| |||
Sbjct 1346809 CTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTGG-GCATCTGGACTCTCA 1346751
Query 76070 AAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGT 76129
||||||| | | || ||||| |||||||| || || || || ||| | ||||| ||
Sbjct 1346750 GAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAGTTCCAATGGGG 1346691
Query 76130 CTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATT 76189
||| || ||| | || | | |||||||||||||| ||||||||||| |||||
Sbjct 1346690 TGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTAATTAATATCAGTAATT 1346632
Query 76190 TTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTT 76249
||||| | || |||||| ||||| || || || || ||| ||| || |
Sbjct 1346631 TTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTTCTTAAAGTCATATGTG 1346572
Query 76250 CCATCTA---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCA 76306
||| | ||| ||||||| || || | || || | |||||||| || ||||||
Sbjct 1346571 TGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCA 1346512
Query 76307 T--TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAA 76364
| | || | | ||| | || ||| || ||||| || || || || ||||| ||||| |
Sbjct 1346511 TCTTTGC--TAGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCA 1346454
Query 76365 GATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAG 76424
| || || |||||||||| ||| | || ||||| || || | || |||| || |
Sbjct 1346453 GGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGCATGTACAGAGTACCTG 1346394
Query 76425 TTTCAATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTG 76483
| || ||| || || | || | | ||| | | || | ||||||| | ||||
Sbjct 1346393 TCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCTGT-GCTTTTACAAC---TTTG 1346338
Query 76484 TAT---CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA 76540
|| || | | ||||| | | |||| | |||||||| ||||||||||
Sbjct 1346337 CGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTCTCAAATTCCTCTCCCCAAATC 1346278
Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACC 76600
||||||| ||| || | ||||| |||||| || | ||||| || || || ||
Sbjct 1346277 TCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGTCCTGATTAGTCTCCACT 1346218
Query 76601 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG--TTCTACGTT 76658
|||||||||||||||| | ||||| || |||| ||||| || | || | || |||
Sbjct 1346217 AGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGTCCCTGGCATGCT--GTT 1346160
Query 76659 CTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTT 76718
|||| || ||||| ||||| || | ||| |||||||| | || ||| ||||||| || |
Sbjct 1346159 CTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCA-AATGCCAAGGCT 1346101
Query 76719 CTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778
| || || || || | ||||| |||| || || || ||| || | ||| || | |
Sbjct 1346100 CCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGTCCACATACCTTACTG 1346041
Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838
|||| ||||| ||||||| ||| || | || || || || | ||||| | |||| ||
Sbjct 1346040 TGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGCCATTAATCCCAGCAA 1345981
Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898
|||| || ||| || | ||| ||| | || | || ||||| || || || |
Sbjct 1345980 TATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTGG 1345921
Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958
| ||||| ||||| | || | || ||||| ||||| || ||||| ||||| ||||
Sbjct 1345920 AAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATACTGTCATCTTTCATAC 1345861
Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018
| ||||| |||||||||| |||| | || || || ||||| | | || |
Sbjct 1345860 TCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCATTGGAGGGCATGGGGG 1345801
Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078
| |||||||| ||||| || ||||| || || ||||||||||||||| | || || || |
Sbjct 1345800 AGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAATAGCAGCATCAATGT 1345741
Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138
| || ||||| || |||| || | |||||||||||| || |||| ||| | |
Sbjct 1345740 CTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTGGTCTTTCAGCCCCTT 1345681
Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 77198
| ||| || |||||||| || || |||| || || |||||||| || || || |
Sbjct 1345680 TTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAACCAAAGTAATTATAAG 1345621
Query 77199 AAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG---TAACAA 77255
| || |||| || || ||||| | ||||| || | || ||| |||| || ||
Sbjct 1345620 AGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTA---TTGGCCAAAATAA 1345564
Query 77256 TATCCA----TGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACA 77311
|||||| |||| ||| |||| | || ||| | ||||| | |||||| |
Sbjct 1345563 TATCCAGTATTGAC-CTGGCCACCATAA---GGGAGCGTTTGCCATTATGAGGATTTATG 1345508
Query 77312 TAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTC 77371
||||| | | ||||||||| ||||| || || | ||| || ||||| ||||| | ||
Sbjct 1345507 TAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTA 1345448
Query 77372 GATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCT 77431
|| || || | || || || | || ||||||||||| || | ||||| |||| ||
Sbjct 1345447 GAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGTCAAGGTCGCA 1345388
Query 77432 GCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGA 77491
|||||||| || || ||||| ||| ||| | ||| || || || | |||| || ||
Sbjct 1345387 GCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTATAAGCCCTGG 1345328
Query 77492 ATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAAT 77551
|| |||| ||||| || | |||||| ||||| || | || | ||| | || ||
Sbjct 1345327 ATTACTTCCATGGTGATCTAAGCAGGATCAACAAAGTCCATATTGAGTCCACAGCA-AAG 1345269
Query 77552 TTTCT-AATACGAGATGTGATTTT 77574
|||| || | ||| ||||||||
Sbjct 1345268 CTTCTGGATTCAAGAAGTGATTTT 1345245
>seq87
Length=11743621
Score = 342 bits (378), Expect = 7e-89
Identities = 624/911 (68%), Gaps = 16/911 (2%)
Strand=Plus/Plus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 46339
|||| ||||| |||| || | |||| ||| ||| | | ||||| ||||| ||
Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
| ||||| || | |||||||| || |||||| | |||||| ||| ||||| |
Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459
||||||| ||||| ||||| || | | | || ||||| || | ||| || |
Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519
|||| ||||| || || | || ||| ||||| | |||||||||| || || |
Sbjct 8842276 GTCTCTCTGCTAC-AACGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334
Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCG 46579
| || | | ||||| ||||| | ||| | ||| || | ||||||| |||||
Sbjct 8842335 TCACATGCAAGGCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATTT 8842394
Query 46580 ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAAT 46639
| ||||| | | ||| ||| || | ||| ||||| ||| || || | ||| |
Sbjct 8842395 CTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAGT 8842454
Query 46640 CACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTA 46699
|||| || | | |||||||| ||||| ||||| || ||| ||||||| ||||||||||
Sbjct 8842455 CACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATTA 8842514
Query 46700 GTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 46759
||| || || ||||| || ||||| | || ||||| ||||||||||| || |||||||
Sbjct 8842515 ATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTA 8842574
Query 46760 CAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTTT 46816
| || || || ||| | || || || | || || || | |||||
Sbjct 8842575 TTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGCA 8842634
Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876
|||||||| ||||| ||||||||||||||||||| ||| || ||||| |||||||| |
Sbjct 8842635 AGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTG-TTCAATGGCATTGAAGAGAAACT 8842693
Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936
|||| | |||||||| || || || | | ||| | |||||||| ||||| |
Sbjct 8842694 CCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGTA 8842753
Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996
||||||| || || || || || || || | ||| | ||||| |||||||| || | |
Sbjct 8842754 TGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGTT 8842813
Query 46997 TACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCA 47056
| |||||| | ||| || ||||||| ||| ||||| || || ||||| || ||||
Sbjct 8842814 GGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCCA 8842873
Query 47057 ATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTT 47116
|||||| |||||||| |||| | | |||| | ||||| | || || |
Sbjct 8842874 GAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCT 8842933
Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176
| || | ||| | || ||||| ||||| || || | ||| ||||| |||||||| | ||
Sbjct 8842934 TGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGCC 8842993
Query 47177 ATATATCACGA 47187
| |||||| ||
Sbjct 8842994 AAATATCATGA 8843004
>seq88
Length=11737398
Score = 132 bits (146), Expect = 7e-26
Identities = 132/171 (77%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| |||||||| ||||| || || |||||| ||| | || || || ||||| || |
Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
||| ||||||||||||||||||||||| ||||| ||||| ||||| || | ||||| |
Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350
Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614
|||||| |||||||| | || || ||| ||| || | ||||| ||||
Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401
Score = 123 bits (136), Expect = 4e-23
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | ||
Sbjct 362828 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 362887
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| || |||| || ||||||||||||||||| ||||| || || | | ||||||
Sbjct 362888 TCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 362947
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 362948 TTTCTTACACCAT 362960
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657
|| ||||||||||||||||| || ||||| || |||| ||||| || | || | ||
Sbjct 371364 ACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACGCTGT 371423
Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717
||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| ||
Sbjct 371424 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 371483
Query 76718 TCTAGATATATCGCCATAACACCCGGTCG 76746
|| || || || || | |||| |||||
Sbjct 371484 TCCAGGTAAATAGCAAATGCACCAGGTCG 371512
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| || | || || || |||||||| ||||| || ||||| || || |||
Sbjct 380517 GTACCAGCATTGAAGAGAGTGGGGGAGGCATGAGTAAACCACTTCTCAGAGAGAAGGTTG 380576
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|||||||||||| | || || || || || ||||| || |||| || | |||||||
Sbjct 380577 TATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAAC 380636
Query 77114 ATATGCTGAGGTCGTTC 77130
||||| || |||| |||
Sbjct 380637 ATATGTTGTGGTCTTTC 380653
Score = 93.3 bits (102), Expect = 6e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009
|| || | ||| ||||| || | || | || | || ||||| ||||| || || |
Sbjct 366480 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGG 366539
Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATC 76068
|| || |||||||| ||||| ||||| | |||||| || | || | || || |||| ||
Sbjct 366540 GCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGG-GCGTCTGGACTCTC 366598
Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128
||||||||| | || ||||| |||||||| || || || || ||||| ||||| ||
Sbjct 366599 AAAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 366658
Query 76129 TCTATGTCTCTTATTGGA 76146
| ||| | ||||| ||
Sbjct 366659 GCGATGGCATTTATTTGA 366676
Score = 93.3 bits (102), Expect = 6e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| || | ||| || ||||| ||||| | || || || || || || || || || ||
Sbjct 385275 CTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGATG 385334
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
||||||||||| || | ||||| |||| || ||| |||| || || ||||| |||| |
Sbjct 385335 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTAGT 385394
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | ||| || || || | |||| || || || ||||||||||
Sbjct 385395 TCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCATGG 385440
>seq23
Length=24341844
Score = 129 bits (142), Expect = 8e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| || |||||||||||||||||||||| ||| || || |||
Sbjct 8996045 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCTTG 8996104
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | || ||||| ||||||||||| || |||||||| || || || ||
Sbjct 8996105 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGGCT 8996164
Query 46774 ACAAGTCTCTCTCC 46787
|||| | ||||||
Sbjct 8996165 ACAACACGCTCTCC 8996178
Score = 86.0 bits (94), Expect = 9e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||||||| || || || || | |||||||||||||| ||||| |||||||| || ||
Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009
|| || || || || ||||| | ||||| |||||||| || ||| | |||||| ||
Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634
>seq9
Length=34412642
Score = 107 bits (118), Expect = 3e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| || || |||||||| || || | ||| |
Sbjct 15801834 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 15801775
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || |
Sbjct 15801774 TTAGCCAGAATATAGCAGCAAAAGATCCGGAGAAGAAAATCCCTTCTACAGCAGCAAAGG 15801715
Query 46772 CGAC 46775
| ||
Sbjct 15801714 CTAC 15801711
Score = 89.7 bits (98), Expect = 7e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
||| ||||| ||||||||||| || |||| ||| ||||||||||| ||||| |||||| |
Sbjct 15794205 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCAGG 15794146
Query 47187 ATATTGGATCGGAAAAATAACAAA 47210
|| ||||| ||||| || |||||
Sbjct 15794145 GTACTGGATGGGAAAGATGACAAA 15794122
>seq48
Length=17931790
Score = 91.5 bits (100), Expect = 2e-13
Identities = 240/359 (67%), Gaps = 18/359 (5%)
Strand=Plus/Minus
Query 44363 TCCCGTTGATCCAAATCCT--TGAGCGTCTCTATTGGTACTATCTAGAGATTGTACTTCC 44420
||| || || ||||| ||| ||| | | || ||||| ||||| | ||| ||||||
Sbjct 14691133 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTGGTGTCATCTAAAACTTGGACTTCC 14691076
Query 44421 TCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCTGTATTT 44480
|||| || |||||| | || |||| | | || || || || |||| |||||| | ||
Sbjct 14691075 TCTATTTCTGGATAAAAAATTCGTTCACAAATAAGCTGTGCAATTCGATCACCCTTTTTG 14691016
Query 44481 ATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCCCCTATAATCT 44540
| || ||| | ||||| ||| ||| | || | | ||| || | ||||||||
Sbjct 14691015 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGCACAGCAGCAACATTTGCTGTATAATCT 14690956
Query 44541 TCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAGAGAAAGACCCGATCTAGGC 44597
|||||||| || ||| |||| ||||| || ||||| || | ||| || | ||
Sbjct 14690955 TCATCTATGACACCATCTCCTACATCTATGAAGTGTTTTACAGCCAAACCAGAACGTGGA 14690896
Query 44598 GCTATTCTTCCATAA----CAGAATTTTGGCATAGACATACGAATATCTGTTTTAATCAA 44653
|| |||||||||| ||||| || | | ||| |||| || |||| | | |
Sbjct 14690895 GCCTCTCTTCCATAACACCCAGAA----GGAAGGGCCATCTGAATGTCCATTTTCA-CGA 14690841
Query 44654 CCGTCTTTCTCCA-GGAGGGATAGTATAATCGTAAGCACTGTATAAATCATATCCTGCC 44711
|| |||||||| || ||| || ||||| || |||| ||| | ||||| || |||
Sbjct 14690840 GGGT-TTTCTCCATGGGTGGAACGTGTAATCATAGGCACCGTACAGGTCATAGCCCGCC 14690783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712878051447360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |