Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq13603 551 4e-152 seq24003 517 8e-142 seq5064 515 3e-141 seq6486 434 8e-117 seq18696 345 3e-90 seq12486 230 2e-55 seq18156 226 2e-54 seq20396 206 2e-48 seq19633 156 3e-33 seq26307 140 2e-28 seq2873 114 9e-21 >seq13603 Length=4153961 Score = 551 bits (610), Expect = 4e-152 Identities = 464/568 (82%), Gaps = 4/568 (1%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| |||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 1089893 AAAACACATCCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 1089834 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| ||| |||||| || |||||| |||||||| | | Sbjct 1089833 TCCTCCTGGGCATCAGAGGGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAA 1089774 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||| Sbjct 1089773 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAACAGT 1089714 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | ||| ||||| ||||| | ||||| || ||| ||||||| Sbjct 1089713 TTAAGATGGCCTGGGTGATCCATGGCTTCCTTATAAATGGAACTGCCACCAGTTATCCAA 1089654 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | | Sbjct 1089653 ATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTAAGGCATCATCCAGA 1089594 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | | ||| |||||| ||| |||||| ||| Sbjct 1089593 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTTCTTGAGTTCCCTGCCGAGAACTACA 1089534 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 1089533 TTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCC 1089474 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| ||||||||||||||| ||| ||||| || || |||||||| ||||||| Sbjct 1089473 ATAATCACCAAATTCTGTTTATCTTCTACTGAAGAGGTCGTGGTCATTCTCTGGAAATAC 1089414 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTT--TGCCAATGCCCATGT 4492 | || |||||| | || ||||| |||| || || |||| |||| |||||||||| Sbjct 1089413 CTGAATTCATTCCTGAGCGGCGGCCAGGGCAGGT--CCCTGTTCTTGCCGATGCCCATGT 1089356 Query 4493 TTTGAGCTACAGCAACAATGCAGTTTAG 4520 | || | ||||| || ||||||||||| Sbjct 1089355 TCTGGGACACAGCGACGATGCAGTTTAG 1089328 Score = 428 bits (474), Expect = 3e-115 Identities = 387/481 (80%), Gaps = 13/481 (3%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 1354881 AAAACACATTCATATTAATAATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 1354822 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| ||| |||||| || |||||| |||||||| | | Sbjct 1354821 TCCTCCTGGGCATCAGAGGGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAA 1354762 Query 4075 TCAAATTCTGGAAAAAAG-GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAG 4133 |||| |||||||||||| ||||||| |||||||| |||||| ||||||||||| Sbjct 1354761 TCAATTTCTGGAAAAAAATGTGTCACTTTCAAAGT-------GATCCTTGTCACAAACAG 1354709 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCA 4193 |||||||| || ||| | | ||| ||||| ||||| || ||||| || ||||||||||| Sbjct 1354708 TTTAAGATGGCCTGGGTGATCCATGGCTTCCTTATAAACGGAACTGCCACCAATTATCCA 1354649 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAA 4253 | ||||||||||||||||||||||||||| ||||| |||||||||| ||||||| | Sbjct 1354648 AATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAATAAGTTTTAAGGCATCATTCAG 1354589 Query 4254 ACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAAC 4313 ||| | || | ||||||||||| ||||| || | ||| |||||| |||||||||| || Sbjct 1354588 ACTTCTGGCAAGAAAATGAGCTCCTTGTGG-AGGTTCTTGAGTTCCCTGCTGAGAACTAC 1354530 Query 4314 ATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACC 4373 ||||||||| | |||||||| || |||||||||||||| |||||||||| | |||| Sbjct 1354529 ATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGGTCTCCTACC 1354470 Query 4374 CATAATCACTAAATTCTGTTTATCT-GGTACAGAAGATGTAGTAG--TCATTCTTTGGAA 4430 ||| ||||| ||||| | ||| ||| || ||| | | |||| | ||||||| ||||| Sbjct 1354469 CAT-ATCACCAAATTTTTTTTCTCTACTTAAAGACGGTCTAGTTGGTTCATTCTCTGGAA 1354411 Query 4431 A 4431 | Sbjct 1354410 A 1354410 >seq24003 Length=1483050 Score = 517 bits (572), Expect = 8e-142 Identities = 454/566 (80%), Gaps = 0/566 (0%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||||||||||||||| || | |||| Sbjct 480220 AAAATACTTTCATATTAATCCTTCTTCTCATATACTTCAAATTTGTACTTGATGCCTTTC 480161 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||| ||||||| || |||||| || |||||| |||||||| | | Sbjct 480160 TCCTCCTGGACATCAGAGAGAACACCCGGGTATTCTGGCAGAAGTTTATATTTCTCCAAA 480101 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| |||||||| || |||||||| ||| Sbjct 480100 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATTCTTGTCACAAATAGT 480041 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||| | || ||| | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 480040 TTAAGGTGGCCTGGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 479981 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||| |||||||||||||||||||| || ||||| ||||| ||||| ||||||| | | Sbjct 479980 ATCATATCTACTTTATTTGCTAATTCCGGTTGTTCAGTAAGGTTTAACGCATCATTCAGA 479921 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 479920 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 479861 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 479860 TTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCC 479801 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||||| || || ||||| || || |||||||| ||||||| | Sbjct 479800 ATAATCACCAGATTCTGTTTACCTTCTATTGAAGAGGTTGTGGTCATTCTCTGGAAATAT 479741 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || ||||| | ||| ||||| |||| || || | ||||| || |||||||| Sbjct 479740 CTGAATTCATTTCTGAGTGGCGGCCAGGGCAGGTCCCCCTTCTTGCCGATACCCATGTTC 479681 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 479680 TGGGACACAGCGACGATGCAGTTTAG 479655 >seq5064 Length=10951 Score = 515 bits (570), Expect = 3e-141 Identities = 464/581 (80%), Gaps = 9/581 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 10692 AAAACACATTCATATTAATAATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 10633 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| ||| |||||| || |||||| |||||||| | | Sbjct 10632 TCCTCCTGGGCATCAGAGGGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAA 10573 Query 4075 TCAAATTCTGGAAAAAAG-GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAG 4133 |||| |||||||||||| ||||||| |||||||| |||||| ||||||||||| Sbjct 10572 TCAATTTCTGGAAAAAAATGTGTCACTTTCAAAGT-------GATCCTTGTCACAAACAG 10520 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCA 4193 |||||||| || ||| | | ||| ||||| ||||| || |||| || ||||||||||| Sbjct 10519 TTTAAGATGGCCTGGGTGATCCATGGCTTCCTTATAAACGAAACTGCCACCAATTATCCA 10460 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAA 4253 | |||| |||||||||||||||||||||| ||||| |||||||||| ||||||| | Sbjct 10459 AATCATGCCTACTTTATTTGCTAATTCTGGTTGTTCAATAAGTTTTAAGGCATCATTCAG 10400 Query 4254 ACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAAC 4313 ||| | || | ||||||||||| |||||| | || || |||||| |||||||||| || Sbjct 10399 ACTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTC-TTGAGTTCCCTGCTGAGAACTAC 10341 Query 4314 ATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACC 4373 ||||||||| | |||||||| || |||||||||||||| |||||||| ||||| |||| Sbjct 10340 ATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACC 10281 Query 4374 CATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATG 4433 ||||||||| ||||| ||||||||| ||| ||||| || || |||||||| ||||||| Sbjct 10280 CATAATCACCAAATTTTGTTTATCTTCTACTGAAGAGGTCGTGGTCATTCTCTGGAAATA 10221 Query 4434 TTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTT 4493 | || |||||| | || ||||| |||| || ||| | ||||| ||||||||||| Sbjct 10220 CCTGAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCACCGTTCTTGCCGATGCCCATGTT 10161 Query 4494 TTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCATAA 4534 || | | ||| | ||||||||||| ||||||| ||| Sbjct 10160 CTGGGACATAGCGATGATGCAGTTTAGCAATTGAACCGTAA 10120 >seq6486 Length=167444 Score = 434 bits (480), Expect = 8e-117 Identities = 427/546 (78%), Gaps = 4/546 (1%) Strand=Plus/Minus Query 3975 ATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACATTAGAAAG 4034 ||| ||||||| ||||||||||| ||||||||| | |||| | | || |||| ||| | Sbjct 73926 ATTATTCTCAT-TACTTCAAATTCGTACTTAATGCCTTTCCCCTTCTGGACATCAGATGG 73868 Query 4035 AACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGT 4094 ||||| || |||||| || ||||||||||||||| | ||||| ||||| ||||||| | Sbjct 73867 AACACCGGG-TATTCTGGCAGAAGTTTGTATTTCTCCAAATCAATTTCTGAAAAAAAG-T 73810 Query 4095 GTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACT 4154 ||||| ||| ||||| ||||| ||||| |||||| | |||||||||| || ||| | | | Sbjct 73809 GTCACTTTCCAAGTCCTGCATAATCCTTGTCACATATAGTTTAAGATGGCCTGGGTGATT 73750 Query 4155 CATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGC 4214 ||| ||||||||| | |||||||| || |||| |||||| | || |||||||||||||| Sbjct 73749 CATGGCTTCTTTACAAACAGAACTGCCACCAACTATCCATATCACATCTACTTTATTTGC 73690 Query 4215 TAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGC 4274 ||||||||| ||||| ||| |||||| |||||| | | ||| | || | ||||||||| Sbjct 73689 TAATTCTGGTTGTTCAATAAATTTTAAGGCATCAGCCAGACTTCTGGCAAGAAAATGAGC 73630 Query 4275 TCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGG 4334 || |||||| | ||||| ||||| |||||||||| | ||||||||| ||||||| | Sbjct 73629 TCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTATATTTTAAA-G 73571 Query 4335 CCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394 || |||||||||||||| |||| || ||||| ||||||||||||| | |||||||| Sbjct 73570 TCGATTCTTCTCAGGAATGCAGAAGCAGGTCTTCCTACCCATAATCACCAGATTCTGTTG 73511 Query 4395 ATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCATAAGTCT 4454 | || ||| ||||| || || ||||| || ||||||| | || |||||| | || Sbjct 73510 ACCTTCTACTGAAGAGGTTGTGGTCATCCTCTGGAAATACCTGAATTCATTCCTGAGCAG 73451 Query 4455 TGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAACAATGCA 4514 |||||| |||| | || ||||||||||||||||| || | ||| || ||||| Sbjct 73450 TGGCCAGGGCAGGACCCCGATCTTGCCAATGCCCATGTTCTGGAACATAGCGACCATGCA 73391 Query 4515 GTTTAG 4520 |||||| Sbjct 73390 GTTTAG 73385 Score = 361 bits (400), Expect = 4e-95 Identities = 411/554 (74%), Gaps = 22/554 (4%) Strand=Plus/Minus Query 3967 TATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACA 4026 ||||||| |||||||||||||||||||||||||||||||| | |||||| | || ||| Sbjct 125739 TATTAATTGTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTTCTGGACA 125680 Query 4027 TTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGA 4086 | |||| || || ||||| || |||||| | ||||| | ||||| ||||||| Sbjct 125679 TCAGAACACCCAATT----ATTCTGGCAGAAGTTTCTGTTTCTTCAAATCAATTTCTGGA 125624 Query 4087 AAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146 ||||| ||||||| ||||||||| ||||| || | ||| || | |||||||||| || | Sbjct 125623 AAAAATGTGTCACTTTCAAAGTCCTGCATAATTCATGTCCCATATAGTTTAAGATGGCCT 125564 Query 4147 GGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACT 4206 || | | |||| ||||| ||| | |||||||| || ||| |||||| || | |||||| Sbjct 125563 GGGTGATTCATGGCTTCCTTACAAACAGAACTGCCATCAACTATCCAAACTGTCTCTACT 125504 Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266 ||||||||||||||||| || || |||||||||| || | ||| | || | | Sbjct 125503 TTATTTGCTAATTCTGGTTGCTCAGTAAGTTTTA-------GTCCAGACTTCTGGCAAGA 125451 Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCT 4326 |||||||||| |||| ||||| |||||||||| | ||||||||| | Sbjct 125450 AAATGAGCTCCTTGTG-----------AGTTCTCTGCTGAGAACTAAATTAATTCTATCC 125402 Query 4327 TTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAA 4386 || |||| || |||||||||| ||| ||||| || ||||| ||||||||||||| | | Sbjct 125401 TTGAAAGATCGATTCTTCTCAGTAATGGAGAAGCAGGTCTTCCTACCCATAATCACCAGA 125342 Query 4387 TTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446 || |||||| || ||| ||||| || || |||||||| ||||||| || || |||||| Sbjct 125341 TTGTGTTTAGCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAAATACTTGAATTCATTC 125282 Query 4447 ATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCA 4506 | || |||||| |||| || || ||| || |||| || || | ||||| Sbjct 125281 CTGAGCAGTGGCCACGGCAGGTCCCCGATCGTGCTGATACCCACCTTCTGGGACACAGCG 125222 Query 4507 ACAATGCAGTTTAG 4520 | ||||||||||| Sbjct 125221 ATGATGCAGTTTAG 125208 >seq18696 Length=4270456 Score = 345 bits (382), Expect = 3e-90 Identities = 431/585 (74%), Gaps = 13/585 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTA--ATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTT 4012 |||| || ||| ||||| || |||||| | |||||||||||||||||||||||| |||| Sbjct 3479034 AAAACACTTTTATATTATAATCATTCTTTTAATATACTTCAAATTTGTACTTAATGCTTT 3478975 Query 4013 TCTCTTCTTGCACATTAGAAAGAACACTT---GGATATTCTATCAAAAGTTTGTATTTCT 4069 |||| || | |||||| || | |||| | || |||||| | | |||| ||||||| Sbjct 3478974 TCTCCTCCTTCACATTGGAGACAACATGTTGTGGGTATTCTGGGAGAGGTTTCTATTTCT 3478915 Query 4070 CTAGATCAAATTCTGGAA--AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCAC 4127 ||| ||||| |||||| |||| ||| ||| |||||| || |||||| ||| ||| | Sbjct 3478914 CTAAATCAACTTCTGGGGGGAAAAAGTGCCACTTTCAAAATCCTGCATGGTCCATGTCTC 3478855 Query 4128 AAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAAT 4187 ||| ||||||| || | | ||| ||| ||||| || || |||||| | ||||| | Sbjct 3478854 AAATAGTTTAAAATGGTCTCT-TAATTCACGGCTTCCTTCTAAACAGAATTGCCTCCCAC 3478796 Query 4188 TATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATC 4247 | | | |||||||||| |||||||| |||||| | || | ||||||||||| ||||| Sbjct 3478795 TTTGAAAACCATGTCTAGTTTATTTGTGAATTCTAGTTGCCCAGTAAGTTTTAAGGCATC 3478736 Query 4248 ATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAG 4307 ||| | ||| | || | ||| | |||||| ||||| | ||||| ||||| | ||||| Sbjct 3478735 ATCCAGACTTTAGGCAAGAAAGTTAGCTCTTTGTGGTGGTTCCTTGAGTTCTCTACTGAG 3478676 Query 4308 AACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTT 4367 ||| | |||||||||| ||||||| | | || || |||| |||||| ||||| ||| | Sbjct 3478675 AACTAAATTAATTCTGTACTTTAAAGACTGATTATTTTCAGTAATTGAAAACCAGGTC-T 3478617 Query 4368 TTTACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTG 4427 | ||| ||||| |||| |||||||||| || ||| ||||| || || |||||| |||| Sbjct 3478616 TCTACTCATAAATACTAGATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTTTTTG 3478557 Query 4428 GAAATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCC 4487 ||| || || | ||| | || | || || || | || || | || ||||||| Sbjct 3478556 GAA----TTGAATTTATTTCTGAGCCAGGGTCAGGGTATGTCCCCATTCCTGACAATGCC 3478501 Query 4488 CATGTTTTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 ||| || || | ||||| ||| |||| |||| | |||| ||| Sbjct 3478500 CATCTTCTGGGAAACAGCGACAGGGCAGCTTAGCGGATGAATCAT 3478456 >seq12486 Length=6174982 Score = 230 bits (254), Expect = 2e-55 Identities = 500/740 (68%), Gaps = 10/740 (1%) Strand=Plus/Plus Query 101534 TAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCA 101593 ||||||||||| | ||||||||| || ||||| || || ||| | ||| ||| Sbjct 2654182 TAAACAGCCATTTCCATTTTAATAGCTGGATGTGGATTGTACCCTTCAACCTTAAAGTCT 2654241 Query 101594 TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGT 101653 || | ||| ||||||||||| ||| |||| | || | ||| |||| || ||| Sbjct 2654242 TCAGTTTTGAAGTCATCAATTTTCTCAACTTTTCGAAGAATCTTGAGTTTTGGGAAAGGT 2654301 Query 101654 CTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCA 101713 || || |||| | ||| ||||| || | || ||||||| | || || || ||| Sbjct 2654302 CTGGGTTCTCGCTGAAGCTGAATTTTCAGTGGCTCGATGTGATTCAGGTAAATATGTGCA 2654361 Query 101714 TCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAA 101773 ||||| | |||||| | ||| || || ||| || |||| || || |||||| | Sbjct 2654362 TCTCCCAAAGTATGTACAAAGTCACCCGGCTTCAGGCCCGTGATGTGCGCGATCATGTAC 2654421 Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTT 101833 | | || | ||||| || ||||| || ||||| |||| || || || | |||| Sbjct 2654422 ATGAGCAGGGCCTAGCTGGCGATGTTGAAAGGCACACCTAGGCCGATGTCTCCCGATCGC 2654481 Query 101834 TGATACAGTTGACAGGAAAGCTTTCCA-TCACAGACATAAAATTGACTTAATACATGACA 101892 || ||||| || ||||| |||| ||| |||| || || || || | | |||| || Sbjct 2654482 TGGTACAGCTGGCAGGACAGCTCACCATTCAC-CACTTAGAACTGGCAGAGGGCATGGCA 2654540 Query 101893 AGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCT 101952 || |||| | |||| ||||| ||| |||||||| ||| | | || ||||| Sbjct 2654541 TGGAGGCAGCGCCATCAGAGGAAGATCTCTTGGATTCCAAGTGCACGTGATGATTCTTCT 2654600 Query 101953 ATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTT-TAATTGGTCAACTCCTTCTC 102011 || |||||| ||||| || || |||||| ||| ||| | |||||||||||||| || Sbjct 2654601 GTCATCAGGGTTGGTTTTGATGGTGTCAATC-ACTCTTTGCAGTTGGTCAACTCCTTTTC 2654659 Query 102012 CTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071 || |||||| | || | | |||||||| || ||||||||||| || || |||| Sbjct 2654660 CTGAATAATCTGAATC--CATATCTCTATTCTGCCCCAAAATGCCTCCATTGGAAGCCAT 2654717 Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131 | || || || | || ||||| |||||| | | || || | |||| | ||| || Sbjct 2654718 AAACTGGGCCCAAGTCCCCTTCTTCTCTGGCGGAGAATCCCAAGCTATCCAGAAA--GTC 2654775 Query 102132 TAG--ATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGT 102189 | | ||||||| |||||||| || | ||| || | | ||||||| | || Sbjct 2654776 TTGGTATCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGGCAGCTCTTCAGCATTTGT 2654835 Query 102190 AGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGT 102249 ||||| ||||||||||||||| || || | |||||| |||| || | | || Sbjct 2654836 GGATCCCTTGATAAACCACAACAACTCCTCCAAAACACCCTTCCAGAACAGATGTTCGGT 2654895 Query 102250 AGTTAAAAGTGGAAATTCAT 102269 |||| || |||||||||| Sbjct 2654896 TGTTAGCAGAGGAAATTCAT 2654915 Score = 163 bits (180), Expect = 2e-35 Identities = 283/406 (70%), Gaps = 4/406 (1%) Strand=Plus/Plus Query 101834 TGATACAGTTGACAGGAAAGCTTTCCAT-CACAGACATAAAATTGACTTAATACATGACA 101892 || ||||| || ||||| |||| || | ||| || || || || | | |||| || Sbjct 331989 TGGTACAGCTGGCAGGACAGCTCACCGTTCACC-ACTTAGAACTGGCAGAGGGCATGGCA 332047 Query 101893 AGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCT 101952 || |||| | |||| ||||| ||| ||||||||| ||||| | || ||||| Sbjct 332048 TGGAGGCAGCGCCATCAGAGGAAGATCTCTTGGATTCCAAGCGCACATGATGATTCTTCT 332107 Query 101953 ATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA-TTGGTCAACTCCTTCTC 102011 || |||||| ||||| || || ||||||| || ||| | |||||||||||||| || Sbjct 332108 GTCATCAGGGTTGGTTTTGATGGTGTCAATCA-CTCTTTGCAGTTGGTCAACTCCTTGTC 332166 Query 102012 CTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071 || |||||| | | | || | |||||||| || |||||||||||||| || |||| Sbjct 332167 CTGAATAATCTGAATCCATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCAT 332226 Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131 | || || || | || ||||| |||||| | | || || | |||| | ||| || Sbjct 332227 AAACTGGGCCCAAGTCCCCTTCTTCTCTGGCGGAGAATCCCAAGCTATCCAGAAAGTCTC 332286 Query 102132 TAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAG 102191 |||||||| |||||||| || | ||| || | || |||||||| | || | Sbjct 332287 GGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGG 332346 Query 102192 ATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAA 102237 |||| |||||||||||| || || || | |||||| |||| || Sbjct 332347 ATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAA 332392 >seq18156 Length=9862770 Score = 226 bits (250), Expect = 2e-54 Identities = 293/401 (73%), Gaps = 43/401 (11%) Strand=Plus/Plus Query 1055 AGCTTTGCTCTCAATGAGCTATAAATAAAAATATAAAATCCACATTGATTACTATACAAG 1114 ||| |||||||||||| || || ||||||| ||| ||||| |||||||||| ||||| || Sbjct 5729213 AGCCTTGCTCTCAATGGGCCATGAATAAAATTATTAAATCAACATTGATTATTATACCAG 5729272 Query 1115 ACAATGAAGATGCTACTCACGTGTGTTATCTACAGTTTAATTATAGATAAAAGACAAATG 1174 ||||||||||||||||||| |||||| |||||| |||||| | ||| |||| ||||||| Sbjct 5729273 ACAATGAAGATGCTACTCAGGTGTGTGGTCTACAATTTAATCAGAGAGAAAACACAAATG 5729332 Query 1175 ATGCTTTACCAACTTAAGAACTACATGACA-TGTGTT---TT-----------CTAGA-- 1217 ||| || |||||| ||||| |||||||| |||||| || ||| | Sbjct 5729333 ATGTCCTAACAACTTGAGAACCACATGACACTGTGTTACATTGAATGTTATGGCTATACA 5729392 Query 1218 -TTCTACATGAT---AG-------TAGAATCTTGAAG--CTTTACAGGTCTTCTGTCTAG 1264 ||| ||| ||| || |||||| ||| | || || || | ||| || || Sbjct 5729393 GTTCAACAGGATTCCAGAAAAGGACAGAATCATGAGGCCCTATAGAGCCCCTCTTTCCAG 5729452 Query 1265 AAGGCATATAGTAAAGATAAAGCTTATCTAGTGTCTTCAAAAGTAAGTAGTAGAGAAGAC 1324 |||||||||| | ||||| |||||| || ||| | ||| ||| |||| |||||||| Sbjct 5729453 AAGGCATATAATGAAGATGAAGCTTGGGCAGGGTCCTGAAAGGTAGGTAGGAGAGAAGAT 5729512 Query 1325 AACATGTAGCATATCACTGAGTAACTTAATTAAGAATACAGAGATa-aaaaaaTT----- 1378 |||| ||| || |||||||||||| |||||||| ||||||||| || |||| Sbjct 5729513 GACATCCGGCACATGACTGAGTAACTTGATTAAGAACACAGAGATACTAATAATTATGGT 5729572 Query 1379 -TGTTCATAGAGATTAAACAGTGAGTAAGTTAGTCAGTTTA 1418 |||||| ||| |||||||||| || || |||| || Sbjct 5729573 GTGTTCA-GGAG-----ACAGTGAGTAGGTCAGCCAGTCTA 5729607 >seq20396 Length=11145135 Score = 206 bits (228), Expect = 2e-48 Identities = 191/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | |||| | | | |||||| || ||||| |||||||| || | ||| ||| Sbjct 6340660 AGCTCTTAGGCCACATGGCGGATAATGGGGGTGACGCAGGTGCAGCCCACGGACACCAGC 6340719 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || || || | |||| | || || | |||||| || || ||| Sbjct 6340720 ATCTTCTCCAGCCGGAAGGAGTTGGTGCAGTGCCGAGGCTCCCTGCGCAGGACCAGGATC 6340779 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||| || || Sbjct 6340780 TCTTGCTGGATGGGGACGGAGTTCATGTGGTAGTCCACGTTCCCATCAGCATTGACGCAG 6340839 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||| ||||| || ||||| ||||||||||||||||| || | || |||||| Sbjct 6340840 CCCAAGTGGCGGCACTTCGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 6340899 Query 27171 CG 27172 || Sbjct 6340900 CG 6340901 Score = 131 bits (144), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 27174 TGGAGAGTCCAAGGAGACGTAGATCTATTGTAGTAGTCTGAAGCCCTTTTAGAACTAGTA 27233 |||||| ||||||| || | |||| |||||||| ||||| | |||||| ||| | ||| Sbjct 6342042 TGGAGATTCCAAGGTGAGGAGGATCGGTTGTAGTAATCTGAGGGCCTTTTGGAATTGGTA 6342101 Query 27234 TTCCAGTTACGGATGCTCAAAGTAACCATCACAGACCGTGGAAAGCTATTGTTAGCAGC- 27292 |||| |||||||||| ||| | |||||||||| ||| || ||| | |||| |||| Sbjct 6342102 TTCCGGTTACGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCCTCAGCA 6342161 Query 27293 --TAAGCATCTTGGGGTTTGTGCGCTTGTTATTTCTGACTTTACTATACAATCTATGCTC 27350 | ||||| |||| |||| | ||||| |||| ||| ||| ||||| || | |||| Sbjct 6342162 TTTGGGCATCCTGGGTTTTGCGGGCTTGCTATTCCTGCCTTCACTATGGCCTCCAGGCTC 6342221 Query 27351 AGCAGCAGAAG 27361 |||||||| || Sbjct 6342222 AGCAGCAGCAG 6342232 >seq19633 Length=3468624 Score = 156 bits (172), Expect = 3e-33 Identities = 244/345 (71%), Gaps = 7/345 (2%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 |||||||| ||||| | || ||||| || |||||| ||||| || || ||||||| Sbjct 1960017 ATTCCAAGTGCACATGATGATTCTTCTGTCATCAGGGTTGGTTTTGATGGTGTCAATCA- 1959959 Query 101986 CTGTTTTAA-TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 || ||| | |||||||||||||| |||| |||||| | || || | ||||||| Sbjct 1959958 CTCTTTGCAGTTGGTCAACTCCTTGTCCTGAATAATCTGAATC--CATCTCTGTATTCTG 1959901 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | || |||||||||||||| || ||||| || || || | || ||||| |||| | Sbjct 1959900 CCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTC---TCTGGCGG 1959844 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 | || || | |||| | ||| || |||||||| |||||||| || | ||| || Sbjct 1959843 AGAATCCCAAGCTATCCAGAAAGTCTCAGGATCCATTGGCATCCCAGATTTTCACTCCCT 1959784 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 | ||| |||||||| | || ||||| |||||||||||| || ||| || | || Sbjct 1959783 TGGATGACAGCTCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAA 1959724 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCAT 102269 |||| |||| || | | || || || | || |||||||||| Sbjct 1959723 CACCCTTCCAGAACAGACATTTGGTTGTCAGCAGAGGAAATTCAT 1959679 >seq26307 Length=1940483 Score = 140 bits (154), Expect = 2e-28 Identities = 103/120 (86%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || ||||||||||| | ||||||||||||||||||||||||||| Sbjct 164046 TTATAAACAGAACTGCCACCAATTATCCAAATCATGTCTACTTTATTTGCTAATTCTGGT 163987 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 ||||| ||||||||||| |||||||| | ||| | || | ||||||||||| |||||| Sbjct 163986 TGTTCAGTAAGTTTTAAGGCATCATCCAGACTTCTGGCAAGAAAATGAGCTCCTTGTGGA 163927 Score = 138 bits (152), Expect = 8e-28 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| |||||| |||||||||| ||||||||||| | |||||||| || ||||||||||| Sbjct 153259 CTTGAGTTCCCTGCTGAGAACTACATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGG 153200 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct 153199 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTATCT 153151 Score = 127 bits (140), Expect = 1e-24 Identities = 117/147 (80%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104 || ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| |||| Sbjct 168245 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCA 168186 Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164 ||||| ||||||||||| |||||||| |||||||||| || ||| | | ||| ||||| Sbjct 168185 AAGTCCTGCATGATCCTTGTCACAAATAGTTTAAGATGGCCTGGGTGATCCATGGCTTCC 168126 Query 4165 TTATACACAGAACTACCTCCAATTATC 4191 || | | | ||| || | ||||| || Sbjct 168125 TTTGAAATAAAACAACAT-CAATTTTC 168100 Score = 96.9 bits (106), Expect = 3e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| |||||||||||| |||||||||||||||||||| | |||| Sbjct 183169 AAAACACATTCATATTAATAATTCTTCTCATAAACTTCAAATTTGTACTTAATGCCTTTC 183110 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047 || || || ||| ||| |||||| ||| ||| Sbjct 183109 TCCTCCTGGGCATCAGAGGGAACACCTGGGTAT 183077 >seq2873 Length=23613886 Score = 114 bits (126), Expect = 9e-21 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29381 GGGTCAGGAGTATATTACAGGTGTTGGAAGTTTGATGACTGTAGCTTTAAACGTATCTCA 29440 |||||| ||||||||||| |||||||||||||||| || || | || | || | ||| Sbjct 8916982 GGGTCAAGAGTATATTACCGGTGTTGGAAGTTTGAGGATTGCACTTTCAGCCGCGTTTCA 8916923 Query 29441 AATCAATTGTCTGAAACACAGTTAAAGTATCATTGTTGTAAGAAGAACTTGTGTAATGTG 29500 || ||||||||||||| ||||||||||| | || || ||||||||| ||||||| | Sbjct 8916922 AACCAATTGTCTGAAAATGAGTTAAAGTATTACTGCTGCAAGAAGAACCTGTGTAACTTT 8916863 Query 29501 AACAAAGGGATTGAAAAT 29518 || ||| | || ||||| Sbjct 8916862 AATGAAGCGCTTAAAAAT 8916845 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 29285 AGCTTGCAATGCTACAACTGTTCTCACTCAACTATGCAGTGTACTACATCTACTAGTTGT 29344 ||| |||| ||||||| |||| || || |||| | ||||| |||| | || | ||| Sbjct 8922679 AGCCTGCAGTGCTACAGCTGTCCTTACCCAACCACTCAGTGCACTATGACCACCAACTGT 8922620 Query 29345 ACATCTAATCTTGACTCTTGTCTCATTGCTAAAGCTGG 29382 |||||||||||||| || ||||||||||| ||||| || Sbjct 8922619 ACATCTAATCTTGATTCGTGTCTCATTGCCAAAGCCGG 8922582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361123863693422