Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq12132 372 4e-98 seq23499 334 9e-87 seq22719 334 9e-87 seq27123 266 4e-66 seq24714 147 3e-30 seq27380 114 2e-20 seq17644 113 5e-20 >seq12132 Length=2475592 Score = 372 bits (412), Expect = 4e-98 Identities = 651/940 (69%), Gaps = 22/940 (2%) Strand=Plus/Minus Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844 |||| |||||| |||| |||| |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | || || || || || | || || || || ||||| | ||||| | ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964 |||| || || ||||||| || | | | | |||| |||| ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 ||| |||| |||||||| || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 24084 | || || | |||| |||| || || || ||||| || || || | | || || Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 57052 Query 24085 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 | |||| | || || ||| | | || ||||| ||||||| || || |||| Sbjct 57051 CGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAAT 56992 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 | ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || ||||| | Sbjct 56991 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 56932 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264 | || || || || ||||| |||||||| ||||| || ||||||||||| || ||||| | Sbjct 56931 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 56872 Query 24265 CTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 24324 |||| |||||||| | | | ||| ||||| || |||| ||| ||| | | | Sbjct 56871 CTGCAGCAAAGGCTACGCG-CGTTCACCATAGGTAGC-CTGTT-TGTCCCCAATCCAGCG 56815 Query 24325 C-----CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 | |||||| | |||||| ||||||||||| || || || ||||| |||||| | Sbjct 56814 CAAGGCCCAATCTGACTTCTTG---ACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 56758 Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439 | |||| || |||||| | || || ||||| | |||||||||||||| ||||| Sbjct 56757 TTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATG 56698 Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499 |||||||| ||||| ||||| || || |||||||| | || || |||||||| ||||| Sbjct 56697 TATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 56638 Query 24500 TATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 24559 | |||||| || | || |||||||| ||||| | ||||| |||||||| || || Sbjct 56637 TTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATAAAGC 56578 Query 24560 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----A 24615 || || || |||||| ||| | || || || | || ||||| || || | Sbjct 56577 CAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAA 56522 Query 24616 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 24675 | || || || | ||||| || || | ||||| || || ||||| ||||| ||||||| Sbjct 56521 TGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACA 56462 Query 24676 TATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 | | |||||| | || || | | || ||||| ||||| Sbjct 56461 TGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq23499 Length=2348749 Score = 334 bits (370), Expect = 9e-87 Identities = 616/893 (69%), Gaps = 20/893 (2%) Strand=Plus/Plus Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | || || ||||| || | | || || || ||||| || ||||| | ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964 |||| || || ||||||| || | | | | |||| |||| ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 23965 ATCTATCTGCGACAAACTCCATATATGTT--TTCATCATTTCACAATTCATTCCTATAAG 24022 ||| ||||| |||||| ||| || |||| ||||| | || ||||| || | || Sbjct 2215741 GTCTGTCTGCCACAAAC-CCA-ATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAG 2215798 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC-AATAGAGACCGCGTCTGTTATAA 24081 || || || | ||| |||| || || || || || || || || || | | || | Sbjct 2215799 CTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGA-ACAGCATTGATAATTA 2215857 Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141 | |||||| | || || ||| | | | ||||| ||||||| || || | Sbjct 2215858 TTTCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAA 2215917 Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201 |||| ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || |||| Sbjct 2215918 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 2215977 Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261 | || || || || || ||||| |||||||| ||||| || |||||||||||||| |||| Sbjct 2215978 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTT 2216037 Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACT 24318 | ||||| |||||||| | | | ||| ||||| | | | |||| |||| | Sbjct 2216038 CCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGT 2216097 Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 24378 ||||| || |||||||| || ||||||||||| || || | ||||| |||||| Sbjct 2216098 GCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAA 2216157 Query 24379 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 24438 | | |||| | |||||| | || || ||||| | |||||||||||||| |||| Sbjct 2216158 ATTCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 2216217 Query 24439 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 24498 | |||||||| |||| ||||| ||||| |||||||| | || || |||||||| || | Sbjct 2216218 GTATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCT 2216277 Query 24499 CTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 24558 || | |||||| || | || |||||||| ||||| || | ||| |||||||| || | Sbjct 2216278 CTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAG 2216337 Query 24559 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 24614 ||| || || |||||| | | | || || || | || ||||| || || Sbjct 2216338 CCAGAACGTGGGATATAAAGTCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCGA 2216393 Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 || || | || | ||||| || || | ||||| || || ||||| ||||| Sbjct 2216394 ATGTCCTCGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTT 2216446 >seq22719 Length=8987742 Score = 334 bits (370), Expect = 9e-87 Identities = 639/941 (68%), Gaps = 28/941 (3%) Strand=Plus/Minus Query 23785 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCA 23841 ||| || |||||| |||| || | |||| ||| ||| | || ||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 23842 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 23901 | | || || || || || | || || || || ||||| || ||||| | ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 23902 TTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAA 23961 | ||||| || | ||||||| || | | | | |||| |||| ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021 | | ||| ||||| |||||||| || ||| ||||| | |||||||| || || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 | || || || | ||| |||| || || || ||||| || || || | | || | Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141 | ||||||| | || || ||| | | || ||||| ||||||| || || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201 |||| ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || |||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261 | || || || || || ||||| |||||||| ||||| || ||||||||||| || |||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACT 24318 | ||||| |||||||| | || | ||| ||||| | | | |||| ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 24378 |||||||| |||||||| | ||||||||||| || || || ||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 24379 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 24438 | | |||| || |||||| | | || ||||| | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 24439 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 24498 | |||||||| ||||| || |||| | | || |||||||| |||| Sbjct 8554696 GTATGTTTTCCATGGCAAT--------------AACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 24499 CTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 24558 || | |||| | || | || |||||||| ||||| | ||||| |||||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 24559 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 24614 ||| || || |||||| ||| | || | ||| || ||||| || || Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCT-TGGGCTTCAGGGATTCC---CAGTGCCGA 8554535 Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 24674 || || || | | ||||| || || | ||||| || || ||||| ||||| |||||| Sbjct 8554534 ATGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATAC 8554475 Query 24675 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || | |||||| | || || | || || ||||| ||||| Sbjct 8554474 ATCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq27123 Length=4923932 Score = 266 bits (294), Expect = 4e-66 Identities = 562/832 (68%), Gaps = 11/832 (1%) Strand=Plus/Minus Query 54031 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 54090 || |||||| |||||||| ||||| |||| || ||| |||||||||| | |||| Sbjct 3337730 TCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTC 3337674 Query 54091 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 54150 || |||||| ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 3337673 TTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 3337614 Query 54151 CAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 54210 || ||| || | | ||||||| | ||||| | || ||||| | |||| ||| || Sbjct 3337613 CAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGT 3337554 Query 54211 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 54270 ||| ||||| ||||||| ||| | | || ||| |||| ||||| ||||| | | Sbjct 3337553 GTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAAC 3337494 Query 54271 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGA 54330 ||||| ||| | | | |||| ||| | | | ||| || || || || |||||| Sbjct 3337493 GTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGA 3337434 Query 54331 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 54390 || ||||| ||| |||||| || ||||| ||||| || || || ||||| |||| | Sbjct 3337433 AATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACT 3337374 Query 54391 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 54450 || |||||| ||||||| | ||| | || | || || ||||| || | || || || Sbjct 3337373 CAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGA 3337314 Query 54451 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG---TCTCGATAGCTGAGTCTAT 54507 ||| || |||||||| | |||| ||| ||||||| | | || || ||| || || Sbjct 3337313 AGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAAT 3337254 Query 54508 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 54567 || || || || || || | || | ||| ||||| ||||| ||| ||||| | | Sbjct 3337253 GTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCAC 3337194 Query 54568 CTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627 || || || |||| ||| || || || | | ||||||||||| |||||||| Sbjct 3337193 TTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTA 3337134 Query 54628 TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTAC 54687 || || ||| | || | |||||| | || || | | ||| |||| ||| | Sbjct 3337133 AGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAAT 3337074 Query 54688 ATCCATGGTAAT-ACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 54745 ||||| || | ||||| | || ||||| ||||| |||| | ||| | | || Sbjct 3337073 ATCCA--GTGCTGACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAG 3337016 Query 54746 TTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 54805 ||| | | || | |||||| | ||| || | || |||||||||||||| | || || Sbjct 3337015 TTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 3336956 Query 54806 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 54857 || || | ||||| || || || ||||| | || || | ||||| |||| Sbjct 3336955 ACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAAG 3336905 >seq24714 Length=5211462 Score = 147 bits (162), Expect = 3e-30 Identities = 364/545 (67%), Gaps = 18/545 (3%) Strand=Plus/Plus Query 24152 TAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACG 24211 || |||||| || || ||||| | ||| |||||||| ||||| || | ||| || | | Sbjct 5055815 TAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTG 5055874 Query 24212 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 24271 || || || || ||||| || || || || |||||| |||| | ||||||| || || Sbjct 5055875 TTTCTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GC 5055931 Query 24272 AAAGGC---AATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 24325 |||||| || |||| ||||||| | | | ||| ||||| || Sbjct 5055932 AAAGGCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGC 5055988 Query 24326 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 24385 |||||| |||| || | ||||||||||| | || || ||||| |||||| | | | Sbjct 5055989 CCAATCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCAT 5056048 Query 24386 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445 ||| || | |||||||| |||| ||||| || ||| ||| ||| || |||| ||||| Sbjct 5056049 TTCTTTGTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTT 5056106 Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505 ||| || || ||||| || || ||||| || | || ||| ||| |||||| Sbjct 5056107 TTCCATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC 5056163 Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565 |||| | || | || |||| || ||| | || || | |||||||| || | || | Sbjct 5056164 AAATTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAAT 5056223 Query 24566 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGA 24625 || |||||||||| |||| || || | || | | | | | || ||||| || Sbjct 5056224 ATTGGATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCTAGTGCTGAATGTCTTTGGA 5056283 Query 24626 TATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 | ||||| || | | ||| || || |||||| || ||||| || ||||| || Sbjct 5056284 CAGGTCCACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAAT 5056342 Query 24686 GTCAT 24690 |||| Sbjct 5056343 ATCAT 5056347 >seq27380 Length=10165399 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 24277 C 24277 | Sbjct 7666631 C 7666631 Score = 100 bits (110), Expect = 3e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||| | || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 7668621 ATCTTTTATGTAAGTGTCAATAAGCAGACTATACATTTCAGAATGTATGTTTTCCATGGC 7668680 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 7668681 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 7668740 >seq17644 Length=22291198 Score = 113 bits (124), Expect = 5e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | Sbjct 3010774 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 3010715 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 3010714 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 3010655 Query 54145 CGGTTCCAAGTATAT 54159 || |||| ||| || Sbjct 3010654 AGGCTCCAGGTAAAT 3010640 Score = 113 bits (124), Expect = 5e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | | Sbjct 3021680 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 3021621 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 3021620 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 3021561 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 3021560 CTGTTTCTTATACCATA 3021544 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGGAA 3024266 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| |||||||||||||| | || || ||||| || || || || || | Sbjct 2993725 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 2993666 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | ||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 2993665 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 2993606 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 54935 ||| ||||| || || ||| | || | |||||||| |||||||||| Sbjct 2993605 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATAG 2993558 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 3016586 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 3016527 Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507 ||||||| ||||||||||||| |||||| | || ||||| || ||||| || | Sbjct 3016526 AATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 3016467 Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 3016466 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 3016407 Query 53568 TCTTATTAGA 53577 ||||| || Sbjct 3016406 GTTTATTTGA 3016397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593506954798560