Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq15686 369 5e-97 seq12132 360 3e-94 seq22719 329 4e-85 seq23499 322 6e-83 seq27123 284 2e-71 seq7161 174 2e-38 seq24714 147 3e-30 seq27380 114 2e-20 seq17644 113 6e-20 >seq15686 Length=13143376 Score = 369 bits (408), Expect = 5e-97 Identities = 371/481 (77%), Gaps = 1/481 (0%) Strand=Plus/Minus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || |||||| | |||||| || | |||||| |||| ||| |||||||||||||| Sbjct 3483442 TTACTTTTTATTAACTGCTTCCAGAAACC-TAACAGGTGCAGGAATAGATTGATGATATC 3483384 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 |||||||| |||| | | ||| | || |||||||| || || ||||| | ||||| Sbjct 3483383 CAAGTAGAGGCTGATGGCAGTTAATAGGTACTCTTCAGGTGACAGTTTATGCCTCAGTGA 3483324 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 || ||||||||||| |||||||| || || | ||| || | ||||| | ||||| Sbjct 3483323 ATGTGTGTCATAGATGATGAATCCACAAAAAAGAAGAGCTTCTGCAGCAGCTAAGACCAA 3483264 Query 9407 CTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCCACAA 9466 ||||| ||| ||||| | | ||||| | |||| | |||| ||| |||||| |||| Sbjct 3483263 CTCCATTGTCTCACTATAAAAAAATAACTTCAAGAATCCTAACAGGCACAAAATCTACAA 3483204 Query 9467 AGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGC 9526 | | |||||| |||||||||| || ||||||||| ||||| |||||||||||||| | Sbjct 3483203 AAGAGCAAACAGCCCTGCTCCAAATTCACTGAAATCCCTCTTAGATTGTAGAGTATACAC 3483144 Query 9527 AGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATC 9586 ||||| | || || |||||||||||||| |||| |||||||| || | | | ||| Sbjct 3483143 AGTCAAACTAAAAATTACTGCAGTAGTCAGTATGAGAGCTTGCAGAATAATACATATATC 3483084 Query 9587 ATAGAAAGTAACAACAGAGGCCAGCGTTAGAGATTCCGACAGTGTAAATCCACAAAGCAG 9646 |||||||||||||||| |||| || |||| ||||||||||||||||||| ||||||| Sbjct 3483083 ATAGAAAGTAACAACAACTGCCACAGTCAGAGCTTCCGACAGTGTAAATCCAAAAAGCAG 3483024 Query 9647 GTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAAAATCAAGCCTATAGA 9706 ||| | || ||||||| |||| ||||| |||||||||||| |||||||| || | ||| Sbjct 3483023 GTACAGGTTAAGGGGATACTTATATCTGTTTAAAGTCAATGCAAAAATCAAACCCAGAGA 3482964 Query 9707 T 9707 | Sbjct 3482963 T 3482963 >seq12132 Length=2475592 Score = 360 bits (398), Expect = 3e-94 Identities = 652/944 (69%), Gaps = 30/944 (3%) Strand=Plus/Minus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| |||| | || |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || || || || || | || || || || ||||| | ||||| | ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 |||| || || |||||||| || | ||| || |||| |||| ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| |||| ||||| || || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 36107 | || || | |||| |||| || || || ||||| || || || | | ||||| Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAATT- 57056 Query 36108 ATAT----TACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 36163 || | |||| | || || ||| | | || ||||| ||||||| || || Sbjct 57055 ATTTCGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCA 56996 Query 36164 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 36223 ||||| ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || ||| Sbjct 56995 AAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGC 56936 Query 36224 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 36283 || || || || || || ||||| |||||||| ||||| || ||||||||||| || ||| Sbjct 56935 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCT 56876 Query 36284 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTT 36343 || ||||| |||||||| | | | || ||||| || |||| ||| ||| | Sbjct 56875 TCCACTGCAGCAAAGGCTACGCGCGT-TCACCATAGGTAGC-CTGTT-TGTCCCCAATCC 56819 Query 36344 TGAGC-----CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 36398 | || |||||| | |||||| ||||||||||| || || || ||||| |||| Sbjct 56818 AGCGCAAGGCCCAATCTGACTTCTTG---ACACAAGGCATCGTTTCAATGGCATTGAAGA 56762 Query 36399 GATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCG 36458 || | | |||| || |||||| | || || ||||| | |||||||||||||| | Sbjct 56761 GAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAG 56702 Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518 |||| |||||||| ||||| ||||| || || |||||||| | || || |||||||| | Sbjct 56701 AATGTATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAA 56642 Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 36578 ||||| |||||| || | || |||||||| ||||| | ||||| |||||||| | Sbjct 56641 CTTCTTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATA 56582 Query 36579 ACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG- 36637 | |||| || || |||||| ||| | || | || | || ||||| || || Sbjct 56581 AAGCCAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGC 56526 Query 36638 ---ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 36694 || || || || | ||||| || || | ||||| || || ||||| ||||| ||| Sbjct 56525 CAAATGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTA 56466 Query 36695 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||||| | |||||| | || || | | || ||||| ||||| Sbjct 56465 TACATGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 329 bits (364), Expect = 4e-85 Identities = 638/941 (68%), Gaps = 28/941 (3%) Strand=Plus/Minus Query 35808 TTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCA 35864 ||| || || ||| |||| | | |||| ||| ||| | || ||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 35865 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 35924 | | || || || || || | || || || || ||||| || ||||| | ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 35925 TTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAA 35984 | ||||| || | |||||||| || | ||| || |||| |||| ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 35985 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 36044 | | ||| ||||| ||||| || || ||| ||||| | |||||||| || || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 36045 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 | || || || | ||| |||| || || || ||||| || || || | | || | Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | ||||| | || || ||| | | || ||||| ||||||| || || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 |||| ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || |||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | || || || || || ||||| |||||||| ||||| || ||||||||||| || |||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACT 36341 | ||||| |||||||| | || | || ||||| | | | |||| ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 |||||||| |||||||| | ||||||||||| || || || ||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 36461 | | |||| || |||||| | | || ||||| | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521 | |||||||| ||||| || |||| | | || |||||||| |||| Sbjct 8554696 GTATGTTTTCCATGGCAAT--------------AACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 || | |||| | || | || |||||||| ||||| | ||||| |||||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 36582 CCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG---- 36637 ||| || || |||||| ||| | || || || | || ||||| || || Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCTTGGGCTTCAG-GGATTCC---CAGTGCCGA 8554535 Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697 || || || | | ||||| || || | ||||| || || ||||| ||||| |||||| Sbjct 8554534 ATGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATAC 8554475 Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 || | |||||| | || || | || || ||||| ||||| Sbjct 8554474 ATCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 322 bits (356), Expect = 6e-83 Identities = 552/797 (69%), Gaps = 8/797 (1%) Strand=Plus/Plus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| |||| | | |||| ||| ||| | || ||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || || ||||| || | | || || || ||||| || ||||| | ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 |||| || || |||||||| || | ||| || |||| |||| ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| ||||| ||||| | || | | ||||| | || ||||| || | || | Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGCT 2215800 Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC-AATAGAGACCGCGTCTGTTATAATA 36106 | || || | ||| |||| || || || || || || || || || | | || || Sbjct 2215801 TCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGA-ACAGCATTGATAATTATT 2215859 Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | |||| | || || ||| | | | ||||| ||||||| || || ||| Sbjct 2215860 TCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAAA 2215919 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 || ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || ||||| Sbjct 2215920 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATC 2215979 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 || || || || || ||||| |||||||| ||||| || |||||||||||||| ||||| Sbjct 2215980 AGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTCC 2216039 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 36343 ||||| |||||||| | | | || ||||| | | | |||| |||| | Sbjct 2216040 ACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGTGC 2216099 Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403 ||||| || |||||||| || ||||||||||| || || | ||||| |||||| | Sbjct 2216100 AAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAAAT 2216159 Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463 | |||| | |||||| | || || ||||| | |||||||||||||| ||||| Sbjct 2216160 TCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 2216219 Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 |||||||| |||| ||||| ||||| |||||||| | || || |||||||| || ||| Sbjct 2216220 ATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 2216279 Query 36524 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 36583 | |||||| || | || |||||||| ||||| || | ||| |||||||| || ||| Sbjct 2216280 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAGCC 2216339 Query 36584 AATACATGTTTTATAAA 36600 | || || |||||| Sbjct 2216340 AGAACGTGGGATATAAA 2216356 >seq27123 Length=4923932 Score = 284 bits (314), Expect = 2e-71 Identities = 665/993 (67%), Gaps = 24/993 (2%) Strand=Plus/Minus Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121 || |||||| |||||||| ||||| |||| || ||| | |||||||| | |||| Sbjct 3337730 TCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTC 3337674 Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181 || |||||| ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 3337673 TTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 3337614 Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 66241 || ||| || || | ||||||| | ||||| | || ||||| | |||| ||| || Sbjct 3337613 CAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGT 3337554 Query 66242 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 66301 ||| ||||| ||||||| ||| | | || ||| |||| | ||||| ||||| | | Sbjct 3337553 GTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAAC 3337494 Query 66302 ATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 66361 ||||| ||| | | | |||| ||| | | | ||| ||||| || || |||||| Sbjct 3337493 GTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGA 3337434 Query 66362 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 66421 || ||||| ||| |||||| || ||||| ||||| || || || ||||| |||| | Sbjct 3337433 AATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACT 3337374 Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481 || |||||| ||||||| | ||| | || | || || ||||| || | || || || Sbjct 3337373 CAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGA 3337314 Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG---TCTCAATAGCTGAGTCTAT 66538 ||| || |||||||| | |||| ||| ||||||| | | ||||| ||| || || Sbjct 3337313 AGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAAT 3337254 Query 66539 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 66598 || || || || || || | || | ||| ||||| ||||| ||| ||||| | | Sbjct 3337253 GTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCAC 3337194 Query 66599 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658 || || || |||||||| || || || | | ||||||||||| |||||||| Sbjct 3337193 TTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTA 3337134 Query 66659 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 66718 || || ||| | || | |||||| | || || | | ||| |||| ||| | Sbjct 3337133 AGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAAT 3337074 Query 66719 ATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 66776 ||||| || | |||| | | || ||||| ||||| |||| | ||| | | || Sbjct 3337073 ATCCAGTGCT--GACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAG 3337016 Query 66777 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 66836 || | | || |||||||| | ||| || | || |||||||||||||| | || || Sbjct 3337015 TTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 3336956 Query 66837 ACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCT 66896 || || | ||||| || | || ||||| | || || | ||||| ||| || ||| Sbjct 3336955 ACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGTTGC- 3336900 Query 66897 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 66956 || ||| | | || | ||| | | | || || ||| | || | | |||||| Sbjct 3336899 AT--------CCAAACTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGATT 3336848 Query 66957 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 67016 || ||||||| || | | ||||| | ||| | | | |||||||| || || Sbjct 3336847 ACTTTCATAGTGATCTGAGCGGGATCAGCAAAATCCATAATGAGTCCATAACA-AAGCTT 3336789 Query 67017 CT-AATACGAGATGTGATTTTATCAAACATGAC 67048 || || ||||| | ||||| ||||| ||||| Sbjct 3336788 CTGGATTAGAGATTTAATTTTGTCAAATATGAC 3336756 >seq7161 Length=8644359 Score = 174 bits (192), Expect = 2e-38 Identities = 168/215 (78%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 9218 TTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATT 9277 |||||| ||| || |||||| | |||||| || | ||||||| |||| ||| ||||| Sbjct 2933839 TTTTAA---TTACTTTTTATTAACTGCTTCCAGAAACCGTAACAGGTGCAGGAATAGATT 2933783 Query 9278 GATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATG 9337 |||||| |||||||||| |||||| ||||| | || |||||||| || || ||||| Sbjct 2933782 GATGATGTCCAAGTAGAGGCTGATAGCAGCTAATATGTATTCTTCAGGTGACAGTTTATG 2933723 Query 9338 TATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGA 9397 || |||||||| ||||||||||| |||||||| ||||| | |||||| || ||||| Sbjct 2933722 CATCAGTGAGTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTGCAGCAGC 2933663 Query 9398 CAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 | ||||| ||||||||| ||||| | | ||||| Sbjct 2933662 TAAGACCAACTCCACTGTCTCACTATAAAAAAATA 2933628 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||| | ||| |||||||| ||||| | ||| |||||||| |||||| | ||| | Sbjct 2926034 CCTGCTCCTAATTTGCTGAAATCCCTCTTAGCTTGCAGAGTATACACAGTCAAACCAAAA 2925975 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||| |||||||||| ||| ||||||||| || | ||| ||||||||||||||||| Sbjct 2925974 AATACTCCAGTAGTCAGTATGTAAGCTTGCAGAATAATATGTACATCATAGAAAGTAAC 2925916 Score = 104 bits (114), Expect = 3e-17 Identities = 86/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 2903133 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCGTCCTCGA 2903074 Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCAT-GGCCATGGCGGC 9946 | |||||||| | ||| | || |||| || ||||||||| || Sbjct 2903073 TTGAGGAGCAAGGGTACCGGGGATCGGGATCGGCCATGGCAGC 2903031 >seq24714 Length=5211462 Score = 147 bits (162), Expect = 3e-30 Identities = 303/442 (69%), Gaps = 19/442 (4%) Strand=Plus/Plus Query 36175 TAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACG 36234 || |||||| || || ||||| | ||| |||||||| ||||| || | ||| || | | Sbjct 5055815 TAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTG 5055874 Query 36235 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 36294 || || || || ||||| || || || || |||||| |||| | ||||||| || || Sbjct 5055875 TTTCTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GC 5055931 Query 36295 AAAGGC---AATAAGTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTTTTGAGC 36348 |||||| || |||| ||||||| ||| ||| ||||| || Sbjct 5055932 AAAGGCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGC 5055988 Query 36349 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 36408 |||||| |||| || | ||||||||||| | || || ||||| |||||| | | | Sbjct 5055989 CCAATCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCAT 5056048 Query 36409 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 36468 ||| || | |||||||| |||| ||||| || ||| ||| ||| || |||| ||||| Sbjct 5056049 TTCTTTGTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTT 5056106 Query 36469 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC-TGTAC 36527 ||| || || ||||| || || ||||| || | || ||| ||| ||||| || || Sbjct 5056107 TTCCATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC 5056163 Query 36528 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 36587 |||| | || | || |||| || ||| | || || | |||||||| || | || | Sbjct 5056164 -AAATTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAA 5056222 Query 36588 CATGTTTTATAAAATATTTTTC 36609 || |||||||||| |||| Sbjct 5056223 TATTGGATATAAAATATCTTTC 5056244 >seq27380 Length=10165399 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 36300 C 36300 | Sbjct 7666631 C 7666631 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 7668621 ATCTTTTATGTAAGTGTCAATAAGCAGACTATACATTTCAGAATGTATGTTTTCCATGGC 7668680 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 7668681 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 7668740 >seq17644 Length=22291198 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | | Sbjct 3021680 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 3021621 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 3021620 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 3021561 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 3021560 CTGTTTCTTATACCATA 3021544 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGGAA 3024266 Score = 109 bits (120), Expect = 7e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| |||||||||||||| | ||| | |||||||| | Sbjct 3010774 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 3010715 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 3010714 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 3010655 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 3010654 AGGCTCCAGGTAAATAGC 3010637 Score = 100 bits (110), Expect = 4e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || ||||| || || || || | | Sbjct 2993725 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 2993666 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | ||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 2993665 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 2993606 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 66966 ||| ||||| || || ||| | || | |||||||| |||||||||| Sbjct 2993605 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATAG 2993558 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 3016586 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 3016527 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||| ||||||||||||| |||||| | || ||||| || ||||| || | Sbjct 3016526 AATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 3016467 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 3016466 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 3016407 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 3016406 GTTTATTTGA 3016397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657934854078480