Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq12132 381 8e-101 seq22719 347 2e-90 seq23499 331 1e-85 seq27123 280 2e-70 seq24714 167 3e-36 seq27380 120 4e-22 seq17644 120 4e-22 >seq12132 Length=2475592 Score = 381 bits (422), Expect = 8e-101 Identities = 653/940 (69%), Gaps = 22/940 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| |||| |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || ||||||| |||||||| ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| |||| | || || || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | |||| |||| || || || ||||| || || || | | || || Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 57052 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | |||| | || || ||| | | || ||||| ||||||| || || |||| Sbjct 57051 CGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAAT 56992 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||| | |||||||||||| ||||| | ||| || ||||| ||||| || ||||| | Sbjct 56991 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 56932 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || || || || ||||| ||||| || ||||| || |||||||||||||| ||||| | Sbjct 56931 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 56872 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAG 42254 |||| |||||||| | | | || ||||| || |||| ||| ||| | | | Sbjct 56871 CTGCAGCAAAGGCTACGCGCGT-TCACCATAGGTAGC-CTGTT-TGTCCCCAATCCAGCG 56815 Query 42255 C-----CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 | |||||| | |||||| ||||||||||||||||| |||||||| |||||| | Sbjct 56814 CAAGGCCCAATCTGACTTCTTG---ACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 56758 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||| | || || || || | |||||||||||||| ||||| Sbjct 56757 TTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATG 56698 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 |||||||| ||||| || || || || |||||||| | ||| || |||| ||| ||||| Sbjct 56697 TATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 56638 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 | |||||| || | || ||||| || ||||| | ||||| |||||||| || || Sbjct 56637 TTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATAAAGC 56578 Query 42490 CAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----A 42545 || || || |||||| ||| | || | ||| || | ||||| || || | Sbjct 56577 CAGAACGTGGGATATAAAGTATCTCTCCT-CGGGCTTCAGGGATTCC---CAGTGCCAAA 56522 Query 42546 TATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACA 42605 | || || || | || || || || | ||||| || || || || ||||| ||||||| Sbjct 56521 TGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACA 56462 Query 42606 TATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | | ||||||| | || || | | |||||||| ||||| Sbjct 56461 TGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 347 bits (384), Expect = 2e-90 Identities = 642/941 (68%), Gaps = 28/941 (3%) Strand=Plus/Minus Query 41715 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCA 41771 ||| || |||||| |||| || | |||| ||| ||| | || ||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 41772 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATAT 41831 | | || || || || || | || || || || |||||||||||||||| ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 41832 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 41891 | ||||| || |||| ||||| || | ||| || |||| |||| ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 41892 TCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 41951 | | ||| ||||| | || || || ||| ||||| | |||||||| || || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 41952 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011 | || || || | ||| |||| || || || ||||| || || || | | || | Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071 | ||||||| | || || ||| | | || ||||| ||||||| || || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 |||| ||||| | |||||||||||| ||||| | ||| || ||||| ||||| || |||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 | || || || || || ||||| ||||| || ||||| || |||||||||||||| |||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACT 42248 | ||||| |||||||| | || | || ||||| | | | |||| ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 42249 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 42308 |||||||| |||||||| | ||||||||||||||||| |||||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 42309 AGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAAT 42368 | | |||| || |||||| | | || || || | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 42369 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT 42428 | |||||||| ||||| || |||| | || || |||| ||| |||| Sbjct 8554696 GTATGTTTTCCATGGCAAT--------------AACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 42429 CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACG 42488 || | |||| | || | || ||||| || ||||| | ||||| |||||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 42489 CCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG---- 42544 ||| || || |||||| ||| | || | || || | ||||| || || Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCT-TGGGCTTCAGGGATTCC---CAGTGCCGA 8554535 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 || || || | | || || || || | ||||| || || || || ||||| |||||| Sbjct 8554534 ATGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATAC 8554475 Query 42605 ATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || | |||||||| || || | || |||||||| ||||| Sbjct 8554474 ATCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 331 bits (366), Expect = 1e-85 Identities = 554/797 (70%), Gaps = 8/797 (1%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || ||||| || | | || || || |||||||||||||||| ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || | || | | ||||| | || ||||| || | || | Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGCT 2215800 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC-AATAGAGACCGCGTCTGTTATAATA 42013 | || || | ||| |||| || || || || || || || || || | | || || Sbjct 2215801 TCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGA-ACAGCATTGATAATTATT 2215859 Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 |||||| | || || ||| | | | ||||| ||||||| || || ||| Sbjct 2215860 TCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAAA 2215919 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 || ||||| | |||||||||||| ||||| | ||| || ||||| ||||| || ||||| Sbjct 2215920 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATC 2215979 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || || || || || ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct 2215980 AGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTCC 2216039 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250 ||||| |||||||| | | | || ||||| | | | |||| |||| | Sbjct 2216040 ACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGTGC 2216099 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 ||||| || |||||||| || ||||||||||||||||| | |||||| |||||| | Sbjct 2216100 AAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAAAT 2216159 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | |||| | |||||| | || || || || | |||||||||||||| ||||| Sbjct 2216160 TCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 2216219 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 |||||||| |||| || || ||||| |||||||| | ||| || |||| ||| || ||| Sbjct 2216220 ATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 2216279 Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490 | |||||| || | || ||||| || ||||| || | ||| |||||||| || ||| Sbjct 2216280 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAGCC 2216339 Query 42491 AATACATGTTTTATAAA 42507 | || || |||||| Sbjct 2216340 AGAACGTGGGATATAAA 2216356 >seq27123 Length=4923932 Score = 280 bits (310), Expect = 2e-70 Identities = 565/832 (68%), Gaps = 11/832 (1%) Strand=Plus/Minus Query 72024 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 72083 || |||||| |||||||| ||||| |||| || ||| |||||||||| | | || Sbjct 3337730 TCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTC 3337674 Query 72084 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 72143 || |||||| ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 3337673 TTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 3337614 Query 72144 CAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 72203 || ||| || || | |||| || | ||||| | || ||||| | |||| ||| || Sbjct 3337613 CAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGT 3337554 Query 72204 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 72263 ||| ||||| ||||||| ||| | | || ||| |||| ||||| ||||| | | Sbjct 3337553 GTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAAC 3337494 Query 72264 ATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 72323 ||||| ||| | | | |||| || | | | ||| ||||| || || |||||| Sbjct 3337493 GTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGA 3337434 Query 72324 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 72383 || ||||| ||| |||||| || ||||| ||||| || || || ||||| |||| | Sbjct 3337433 AATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACT 3337374 Query 72384 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 72443 || |||||| ||||||| | ||| | || | || || ||||| || | || || || Sbjct 3337373 CAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGA 3337314 Query 72444 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG---TCTCAATAGCTGATTCTAT 72500 ||| || |||||||| | |||| || ||||||| | | ||||| ||| || || Sbjct 3337313 AGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAAT 3337254 Query 72501 ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560 || || || || || || | || | ||| ||||||||||| ||| ||||| | | Sbjct 3337253 GTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCAC 3337194 Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 || ||| || |||||||| || || || | | ||||||||||| |||||||| Sbjct 3337193 TTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTA 3337134 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 || || ||| | || | |||||| | ||||| | | ||| |||| ||| || Sbjct 3337133 AGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAAT 3337074 Query 72681 ATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 72738 ||||| || || |||| | | || ||||| ||||| |||| | ||| | | || Sbjct 3337073 ATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAG 3337016 Query 72739 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 72798 || | | || |||||||| | ||| || | || |||||||| ||||| | || || Sbjct 3337015 TTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 3336956 Query 72799 ACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAG 72850 || || | || || || || || ||||| | || || | ||||| |||| Sbjct 3336955 ACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAAG 3336905 >seq24714 Length=5211462 Score = 167 bits (184), Expect = 3e-36 Identities = 371/544 (68%), Gaps = 22/544 (4%) Strand=Plus/Plus Query 42085 ACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 42144 ||||||||| || ||||| | ||| |||||||| ||||| || | ||| || | | || Sbjct 5055818 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 5055877 Query 42145 TTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAA 42204 || || || ||||| || || || || |||||| ||||| | ||||||| || ||||| Sbjct 5055878 CTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GCAAA 5055934 Query 42205 GGC---AATAAGTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTTTTGAGCCCA 42258 ||| || |||| ||||||| ||| ||| ||||| ||||| Sbjct 5055935 GGCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCA 5055991 Query 42259 ATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttC 42318 ||| |||| || | |||||||||||| |||| |||||||| |||||| | | |||| Sbjct 5055992 ATCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCATTTC 5056051 Query 42319 ATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTC 42378 || | |||||||| |||| || || || ||| ||| ||| || |||| |||||||| Sbjct 5056052 TTTGTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTTTTC 5056109 Query 42379 AATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC-TGTACAAA 42437 || || || || || || ||||| || || || ||| |||| ||||| || || || Sbjct 5056110 CATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AA 5056165 Query 42438 ATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 42497 || | || | || |||| | ||| | || || | |||||||| || | || | || Sbjct 5056166 ATTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAATAT 5056225 Query 42498 GTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCC-AATCATTGATATCTTTAGAT 42556 |||||||||| |||| || || || | |||| | | | || ||||| || Sbjct 5056226 TGGATATAAAATATCTTTCCTCAGG-CTTCAGGGCTTCCTAGTGCTGAATGTCTTTGGAC 5056284 Query 42557 ATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATA 42616 | || || || | || ||| || || ||||| || ||||| || ||||| ||| Sbjct 5056285 AGGTCCACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAATA 5056343 Query 42617 TCAT 42620 |||| Sbjct 5056344 TCAT 5056347 >seq27380 Length=10165399 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||| ||||| ||||| ||||||| Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 42207 C 42207 | Sbjct 7666631 C 7666631 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/139 (75%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 7664669 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 7664728 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || |||||||||||||||| ||| ||||| | Sbjct 7664729 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 7664788 Query 41835 CCATGAAATCAAACGGATT 41853 |||| || ||||| ||||| Sbjct 7664789 CCATAAAGTCAAATGGATT 7664807 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||| | || || || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 7668621 ATCTTTTATGTAAGTGTCAATAAGCAGACTATACATTTCAGAATGTATGTTTTCCATGGC 7668680 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || |||| ||| |||||| | |||||| || Sbjct 7668681 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 7668740 >seq17644 Length=22291198 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || |||||| |||| |||| || || ||||| || | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| |||||||| ||||| || || || || |||||||| || | | || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGGAA 3024266 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | || Sbjct 3010770 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 3010711 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 3010710 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 3010651 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 3010650 TCCAGGTAAATAGC 3010637 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 3021680 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 3021621 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || |||||||| || || || ||||| || || | | || | Sbjct 3021620 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 3021561 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 3021560 CTGTTTCTTATACCAT 3021545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670896566400720