Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq15423 87.8 1e-12 >seq15423 Length=9779632 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33163 CAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAA 33222 || ||||| || ||||| | || || ||||| ||||||||| | || || |||| Sbjct 6864554 CAGATGCAGAGTAGACTCCATCTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAG 6864495 Query 33223 TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCT 33279 |||||| ||| ||| || | | |||||| || | || || ||||| || || | | Sbjct 6864494 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGAT 6864435 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 | |||| |||| ||| | ||| || ||||| ||| || || || || || || Sbjct 6864434 TTTGGCCT---TTACATTTTCTAACGTATCCGAGGGTTCAACTTCGAGGGTAATAGTCTT 6864378 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 |||||||||||||| || ||||| ||||| || Sbjct 6864377 CCCCGTAAGAGTTTTCACAAAAATCTGCATTTT 6864345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318665235079956