Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq12132 407 2e-108 seq22719 365 6e-96 seq23499 354 1e-92 seq27123 280 2e-70 seq24714 176 6e-39 seq27380 123 3e-23 seq17644 114 2e-20 >seq12132 Length=2475592 Score = 407 bits (450), Expect = 2e-108 Identities = 662/942 (70%), Gaps = 26/942 (3%) Strand=Plus/Minus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| |||| |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || || || || | || || || || ||||| | |||||||| ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 ||| | || || || || || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 33253 | || || | |||| |||| || || || ||||| || || |||| || || | || Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATA-ATTAT 57054 Query 33254 ATCTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 || | | ||| | || ||| || | || ||||| ||||||| || || || Sbjct 57053 TTCGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAA 56994 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| ||||| | |||||| ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 56993 ATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCAT 56934 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || || || || || ||||| |||||||| || || || |||||||||||||| ||||| Sbjct 56933 CAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTC 56874 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTG 33491 |||||||||||||| | | | || ||||| || |||| ||| ||| | | Sbjct 56873 CACTGCAGCAAAGGCTACGCGCGT-TCACCATAGGTAGC-CTGTT-TGTCCCCAATCCAG 56817 Query 33492 AGC-----CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 || |||||| | |||||| ||||||||||||||||| |||||||| |||||| Sbjct 56816 CGCAAGGCCCAATCTGACTTCTTG---ACACAAGGCATCGTTTCAATGGCATTGAAGAGA 56760 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 | | |||| || |||||| | ||||| || || | |||||||||||||| ||| Sbjct 56759 AATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAA 56700 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 || |||||||| ||||| || || || || |||||||| | || || |||||||| ||| Sbjct 56699 TGTATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACT 56640 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 ||| |||||| ||| |||| |||||||| ||||| | ||||| |||||||| || Sbjct 56639 TCTTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATAAA 56580 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG--- 33783 |||| || || |||||| ||| | || || || | || ||||| || || Sbjct 56579 GCCAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCA 56524 Query 33784 -ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 || || || || | || || || || | ||||| || || ||||| ||||| ||||| Sbjct 56523 AATGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATA 56464 Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||||| |||||| | | || | || |||||||| ||||| Sbjct 56463 CATGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 365 bits (404), Expect = 6e-96 Identities = 646/941 (69%), Gaps = 28/941 (3%) Strand=Plus/Minus Query 32954 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCA 33010 ||| || |||||| |||| || | |||| ||| ||| | || ||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 33011 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 33070 | | || || || || || | || || || || ||||| |||||||||| ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 33071 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 33130 | ||||| || |||| ||||| || | ||| || |||| |||| ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 33190 | | ||| || || || || || || ||| ||||| | |||||||| || || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 | || || || | ||| |||| || || || ||||| || || |||| | || | Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | ||| || | || || ||| || | || ||||| ||||||| || || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 |||| ||||| | |||||| ||||| ||||| ||||| || ||||| ||||| || |||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || || || || || ||||| |||||||| || || || |||||||||||||| |||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33487 | |||||||||||||| | || | || ||||| | | | |||| ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 |||||||| |||||||| | ||||||||||||||||| |||||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||| || |||||| | |||| || || | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 | |||||||| ||||| || |||| | | || |||||||| |||| Sbjct 8554696 GTATGTTTTCCATGGCAAT--------------AACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 || | |||| | ||| |||| |||||||| ||||| | ||||| |||||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 33783 ||| || || |||||| ||| | || | ||| || ||||| || || Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCT-TGGGCTTCAGGGATTCC---CAGTGCCGA 8554535 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 || || || | | || || || || | ||||| || || ||||| ||||| |||||| Sbjct 8554534 ATGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATAC 8554475 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 || | |||||| | | || | ||| |||||||| ||||| Sbjct 8554474 ATCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 354 bits (392), Expect = 1e-92 Identities = 559/797 (70%), Gaps = 8/797 (1%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || ||||| || | | || || || ||||| |||||||||| ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 ||| || || || || | || | | ||||| | || ||||| || | || | Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGCT 2215800 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTC-AATGGATACCGCATCTGTTATAATA 33252 | || || | ||| |||| || || || || || || || || |||| | || || Sbjct 2215801 TCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGA-ACAGCATTGATAATTATT 2215859 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 ||| || | || || ||| || | | ||||| ||||||| || || ||| Sbjct 2215860 TCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAAA 2215919 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 || ||||| | |||||| ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 2215920 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATC 2215979 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || || || || || ||||| |||||||| || || || ||||||||||| || ||||| Sbjct 2215980 AGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTCC 2216039 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33489 |||||||||||||| | | | || ||||| | | | |||| |||| | Sbjct 2216040 ACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGTGC 2216099 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549 ||||| || |||||||| || ||||||||||||||||| | |||||| |||||| | Sbjct 2216100 AAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAAAT 2216159 Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33609 | |||| | |||||| | ||||| || || | |||||||||||||| ||||| Sbjct 2216160 TCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 2216219 Query 33610 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 33669 |||||||| |||| || || ||||| |||||||| | || || |||||||| || ||| Sbjct 2216220 ATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 2216279 Query 33670 GTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33729 | |||||| ||| |||| |||||||| ||||| || | ||| |||||||| || ||| Sbjct 2216280 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAGCC 2216339 Query 33730 AATACATGTTTTATAAA 33746 | || || |||||| Sbjct 2216340 AGAACGTGGGATATAAA 2216356 >seq27123 Length=4923932 Score = 280 bits (310), Expect = 2e-70 Identities = 565/832 (68%), Gaps = 11/832 (1%) Strand=Plus/Minus Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277 || |||||| |||||||| ||||| |||| || ||| |||||||||| | |||| Sbjct 3337730 TCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTC 3337674 Query 63278 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63337 || |||||| ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 3337673 TTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 3337614 Query 63338 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63397 || ||| || || | ||||||| | ||||| | || ||||| | |||| ||| || Sbjct 3337613 CAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGT 3337554 Query 63398 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63457 ||| ||||| ||||||| ||| | | || || | || | ||||| || || | | Sbjct 3337553 GTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAAC 3337494 Query 63458 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63517 ||||| ||| | | | |||| ||| | | | ||| ||||| || || |||||| Sbjct 3337493 GTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGA 3337434 Query 63518 GATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTT 63577 || ||||| ||| |||||| |||||||| || || || ||||| ||||| |||| | Sbjct 3337433 AATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACT 3337374 Query 63578 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63637 || |||||| ||||||| | ||| | || | || || ||||| || | || || || Sbjct 3337373 CAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGA 3337314 Query 63638 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG---TCTCAATAGCTGAGTCTAT 63694 ||| || |||||||| | |||| ||| ||||||| | | ||||| ||| || || Sbjct 3337313 AGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAAT 3337254 Query 63695 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63754 || || || || || || | || | ||| ||||| ||||| ||| ||||| | | Sbjct 3337253 GTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCAC 3337194 Query 63755 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814 || || || |||||||| || || || | | ||||||||||| |||||||| Sbjct 3337193 TTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTA 3337134 Query 63815 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAT 63874 || || ||| | || | |||||| | || || | | ||| |||| ||| || Sbjct 3337133 AGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAAT 3337074 Query 63875 ATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 63932 ||||| || || |||| | | || ||||| ||||| |||| | ||| | | || Sbjct 3337073 ATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAG 3337016 Query 63933 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 63992 || | | || |||||||| | ||| || | || |||||||| ||||| | || || Sbjct 3337015 TTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 3336956 Query 63993 ACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 64044 || || | || || || || || ||||| | || || | ||||| |||| Sbjct 3336955 ACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAAG 3336905 >seq24714 Length=5211462 Score = 176 bits (194), Expect = 6e-39 Identities = 311/445 (70%), Gaps = 19/445 (4%) Strand=Plus/Plus Query 33324 ACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 33383 |||||| || || ||||| ||||| |||||||| ||||| || | ||| || | | || Sbjct 5055818 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 5055877 Query 33384 TTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAA 33443 || || || ||||| || ||||| || |||||| ||||| | ||||||| || ||||| Sbjct 5055878 CTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GCAAA 5055934 Query 33444 GGC---AATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGCCCA 33497 ||| || |||| ||||||| | | | ||| ||||| ||||| Sbjct 5055935 GGCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCA 5055991 Query 33498 ATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttC 33557 ||| |||| || | |||||||||||| |||| |||||||| |||||| | | |||| Sbjct 5055992 ATCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCATTTC 5056051 Query 33558 ATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTC 33617 || | |||||||||| || || || || ||| ||| ||| || |||| |||||||| Sbjct 5056052 TTTGTTGTCTTTAACAT--GTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTTTTC 5056109 Query 33618 AATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC-TGTACAAA 33676 || || || || || || ||||| || | || ||| ||| ||||| || || || Sbjct 5056110 CATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AA 5056165 Query 33677 ATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33736 || | ||| |||| |||| || ||| | || || | |||||||| || | || | || Sbjct 5056166 ATTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAATAT 5056225 Query 33737 GTTTTATAAAATATTTTTCGTCTGG 33761 |||||||||| |||| || || Sbjct 5056226 TGGATATAAAATATCTTTCCTCAGG 5056250 >seq27380 Length=10165399 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| || ||||| ||||| || ||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| |||||||| || || || |||||||||||||| ||||| ||||||||||||| Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 33446 C 33446 | Sbjct 7666631 C 7666631 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 7668621 ATCTTTTATGTAAGTGTCAATAAGCAGACTATACATTTCAGAATGTATGTTTTCCATGGC 7668680 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 7668681 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 7668740 Query 33684 CGCC 33687 | || Sbjct 7668741 CACC 7668744 >seq17644 Length=22291198 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | Sbjct 3010774 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 3010715 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 3010714 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 3010655 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||| ||| || || Sbjct 3010654 AGGCTCCAGGTAAATAGC 3010637 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGGAA 3024266 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 3021680 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 3021621 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 3021620 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 3021561 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 3021560 CTGTTTCTTATACCATA 3021544 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 3016586 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 3016527 Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694 ||||||| ||||||||||||| |||||| | || ||||| || ||||| || | Sbjct 3016526 AATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 3016467 Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754 | | | || ||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 3016466 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 3016407 Query 62755 TCTTATTAGA 62764 ||||| || Sbjct 3016406 GTTTATTTGA 3016397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622721989013520