Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq20631 93.3 4e-14 seq27641 84.2 2e-11 >seq20631 Length=3741062 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| |||||||| || || | ||||| ||||| ||| Sbjct 1077955 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTATGCTGGCAAGCAACTAGAA 1078014 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | || ||||| ||||||||||| || |||||| | |||||||| || Sbjct 1078015 GATGGACGTACTCTCTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTGGTGTTG 1078074 Query 26982 AGACTT 26987 |||||| Sbjct 1078075 AGACTT 1078080 >seq27641 Length=16599674 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| |||||||| || | | ||||| ||||| ||| Sbjct 1039127 GATAAGGAAGGCATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 1039186 Query 26922 GATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || | | | || | | ||||| ||||||||||| || |||||| | ||||| || || Sbjct 1039187 GACGG-ACATACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGCT 1039245 Query 26981 GAGACTTAGAGGAGG 26995 ||||||| | || || Sbjct 1039246 GAGACTTCGTGGTGG 1039260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478489351575840