Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq12132 367 2e-96 seq22719 329 4e-85 seq23499 327 1e-84 seq27123 293 3e-74 seq24714 156 5e-33 seq27380 114 2e-20 seq17644 114 2e-20 >seq12132 Length=2475592 Score = 367 bits (406), Expect = 2e-96 Identities = 650/940 (69%), Gaps = 22/940 (2%) Strand=Plus/Minus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 32370 |||| |||||| |||| | || |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 32430 | || || || || || | || || || || ||||| | ||||| | ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 32431 CCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 32490 |||| || || |||||||| || | ||| || |||| |||| ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 32491 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 32550 ||| |||| ||||| || || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 32551 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 32610 | || || | |||| |||| || || || ||||| || || || | | || || Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 57052 Query 32611 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 | |||| | || || ||| | | || ||||| ||||||| || || |||| Sbjct 57051 CGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAAT 56992 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 | ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || ||||| | Sbjct 56991 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 56932 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | || || || || ||||| |||||||| ||||| || ||||||||||| || ||||| | Sbjct 56931 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 56872 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 32850 |||| |||||||| | | | || ||||| || |||| ||| ||| | | | Sbjct 56871 CTGCAGCAAAGGCTACGCGCGT-TCACCATAGGTAGC-CTGTT-TGTCCCCAATCCAGCG 56815 Query 32851 C-----CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 | |||||| | |||||| ||||||||||| || || || ||||| |||||| | Sbjct 56814 CAAGGCCCAATCTGACTTCTTG---ACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 56758 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | |||| || |||||| | || || ||||| | |||||||||||||| ||||| Sbjct 56757 TTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATG 56698 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 |||||||| ||||| ||||| || || ||||| || | || || |||||||| ||||| Sbjct 56697 TATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 56638 Query 33026 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33085 | |||||| || | || |||||||| ||||| | ||||| |||||||| || || Sbjct 56637 TTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATAAAGC 56578 Query 33086 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----A 33141 || || || |||||| ||| | || || || | || ||||| || || | Sbjct 56577 CAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAA 56522 Query 33142 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33201 | || || || | ||||| || || | ||||| || || ||||| ||||| ||||||| Sbjct 56521 TGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACA 56462 Query 33202 TATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 | | |||||| | || || | | || ||||| ||||| Sbjct 56461 TGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 329 bits (364), Expect = 4e-85 Identities = 638/941 (68%), Gaps = 28/941 (3%) Strand=Plus/Minus Query 32311 TTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCA 32367 ||| || |||||| |||| | | |||| ||| ||| | || ||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 32368 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 32427 | | || || || || || | || || || || ||||| || ||||| | ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 32428 TTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 32487 | ||||| || | |||||||| || | ||| || |||| |||| ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 32488 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 32547 | | ||| ||||| ||||| || || ||| ||||| | |||||||| || || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 | || || || | ||| |||| || || || ||||| || || || | | || | Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 32667 | ||||||| | || || ||| | | || ||||| ||||||| || || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 |||| ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || |||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787 | || || || || || ||||| |||||||| ||||| || ||||||||||| || |||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 32844 | ||||| |||||||| | || | || ||||| | | | |||| ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 32845 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 32904 |||||||| |||||||| | ||||||||||| || || || ||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 32905 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 32964 | | |||| || |||||| | | || ||||| | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 32965 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTT 33024 | |||||||| ||||| || | || | | || |||||||| |||| Sbjct 8554696 GTATGTTTTCCATGGCAAT--------------AACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 33025 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33084 || | |||| | || | || |||||||| ||||| | ||||| |||||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 33085 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 33140 ||| || || |||||| ||| | || | ||| || ||||| || || Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCT-TGGGCTTCAGGGATTCC---CAGTGCCGA 8554535 Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33200 || || || | | ||||| || || | ||||| || || ||||| ||||| |||||| Sbjct 8554534 ATGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATAC 8554475 Query 33201 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || | |||||| | || || | || || ||||| ||||| Sbjct 8554474 ATCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 327 bits (362), Expect = 1e-84 Identities = 611/891 (69%), Gaps = 16/891 (2%) Strand=Plus/Plus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 32370 |||| |||||| |||| | | |||| ||| ||| | || ||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 32430 | || || ||||| || | | || || || ||||| || ||||| | ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 32431 CCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 32490 |||| || || |||||||| || | ||| || |||| |||| ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 32491 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 32550 ||| ||||| ||||| | || | | ||||| | || ||||| || | || | Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGCT 2215800 Query 32551 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC-AATAGAGACCGCGTCTGTTATAATA 32609 | || || | ||| |||| || || || || || || || || || | | || || Sbjct 2215801 TCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGA-ACAGCATTGATAATTATT 2215859 Query 32610 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 32669 |||||| | || || ||| | | | ||||| ||||||| || || ||| Sbjct 2215860 TCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAAA 2215919 Query 32670 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 32729 || ||||||| |||||| ||||| ||||| | ||| || ||||| ||||| || ||||| Sbjct 2215920 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATC 2215979 Query 32730 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 32789 || || || || || ||||| |||||||| ||||| || |||||||||||||| ||||| Sbjct 2215980 AGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTCC 2216039 Query 32790 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 32846 ||||| |||||||| | | | || ||||| | | | |||| |||| | Sbjct 2216040 ACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGTGC 2216099 Query 32847 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 32906 ||||| || |||||||| || ||||||||||| || || | ||||| |||||| | Sbjct 2216100 AAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAAAT 2216159 Query 32907 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 32966 | |||| | |||||| | || || ||||| | |||||||||||||| ||||| Sbjct 2216160 TCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 2216219 Query 32967 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 |||||||| |||| ||||| ||||| ||||| || | || || |||||||| || ||| Sbjct 2216220 ATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 2216279 Query 33027 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33086 | |||||| || | || |||||||| ||||| || | ||| |||||||| || ||| Sbjct 2216280 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAGCC 2216339 Query 33087 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----AT 33142 | || || |||||| | | | || || || | || ||||| || || || Sbjct 2216340 AGAACGTGGGATATAAAGTCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCGAAT 2216395 Query 33143 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | || | ||||| || || | ||||| || || ||||| ||||| Sbjct 2216396 GTCCTCGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTT 2216446 >seq27123 Length=4923932 Score = 293 bits (324), Expect = 3e-74 Identities = 667/993 (67%), Gaps = 24/993 (2%) Strand=Plus/Minus Query 63073 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63132 || |||||| |||||||| ||||| |||| || ||| |||||||||| | |||| Sbjct 3337730 TCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTC 3337674 Query 63133 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63192 || |||||| ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 3337673 TTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 3337614 Query 63193 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63252 || ||| || || | ||||||| | ||||| | || ||||| | |||| ||| || Sbjct 3337613 CAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGT 3337554 Query 63253 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGAT 63312 ||| ||||| ||||||| ||| | | || ||| |||| | ||||| ||||| | | Sbjct 3337553 GTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAAC 3337494 Query 63313 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63372 ||||| ||| | | | |||| ||| | | | ||| ||||| || || |||||| Sbjct 3337493 GTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGA 3337434 Query 63373 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 63432 || ||||| ||| |||||| || ||||| ||||| || || || ||||| |||| | Sbjct 3337433 AATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACT 3337374 Query 63433 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63492 || |||||| ||||||| | ||| | || | || || ||||| || | || || || Sbjct 3337373 CAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGA 3337314 Query 63493 AGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTAT 63549 ||| ||||||||||| | |||| ||| ||||||| || ||||| ||| || || Sbjct 3337313 AGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAAT 3337254 Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 || || || || || || | || | ||| ||||| ||||| ||| ||||| | | Sbjct 3337253 GTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCAC 3337194 Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 || || || |||||||| || || || | | ||||||||||| |||||||| Sbjct 3337193 TTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTA 3337134 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729 || || ||| | || | |||||| | || || | | ||| |||| ||| | Sbjct 3337133 AGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAAT 3337074 Query 63730 ATCCA-TGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAG 63787 ||||| || | |||| | | || ||| | ||||| |||| | ||| | | || Sbjct 3337073 ATCCAGTGCT--GACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAG 3337016 Query 63788 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 63847 || | | || |||||||| | ||| || | || |||||||||||||| | || || Sbjct 3337015 TTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 3336956 Query 63848 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCT 63907 || || | ||||| || || || ||||| | || || | ||||| ||| || ||| Sbjct 3336955 ACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGTTGC- 3336900 Query 63908 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATA 63967 || ||| | | || | ||| | | | || || ||| | || | | |||||| Sbjct 3336899 AT--------CCAAACTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGATT 3336848 Query 63968 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 64027 || ||||||| || | | ||||| | ||| | | | |||||||| || || Sbjct 3336847 ACTTTCATAGTGATCTGAGCGGGATCAGCAAAATCCATAATGAGTCCATAACA-AAGCTT 3336789 Query 64028 CT-AATACGAGATGTGATTTTATCAAACATGAC 64059 || || ||||| | ||||| ||||| ||||| Sbjct 3336788 CTGGATTAGAGATTTAATTTTGTCAAATATGAC 3336756 >seq24714 Length=5211462 Score = 156 bits (172), Expect = 5e-33 Identities = 368/546 (67%), Gaps = 20/546 (4%) Strand=Plus/Plus Query 32678 TAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACG 32737 || |||||| || || ||||| | ||| |||||||| ||||| || | ||| || | | Sbjct 5055815 TAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTG 5055874 Query 32738 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 32797 || || || || ||||| || || || || |||||| |||| | ||||||| || || Sbjct 5055875 TTTCTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GC 5055931 Query 32798 AAAGGC---AATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 32851 |||||| || |||| ||||||| | | | ||| ||||| || Sbjct 5055932 AAAGGCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGC 5055988 Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911 |||||| |||| || | ||||||||||| | || || ||||| |||||| | | | Sbjct 5055989 CCAATCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCAT 5056048 Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971 ||| || | |||||||| |||| ||||| || ||| ||| ||| || |||| ||||| Sbjct 5056049 TTCTTTGTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTT 5056106 Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC-TGTAC 33030 ||| || || ||||| || || |||||||| | || ||| ||| ||||| || || Sbjct 5056107 TTCCATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC 5056163 Query 33031 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33090 |||| | || | || |||| || ||| | || || | |||||||| || | || | Sbjct 5056164 -AAATTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAA 5056222 Query 33091 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 33150 || |||||||||| |||| || || | || | | | | | || ||||| | Sbjct 5056223 TATTGGATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCTAGTGCTGAATGTCTTTGG 5056282 Query 33151 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 33210 | | ||||| || | | ||| || || |||||| || ||||| || ||||| | Sbjct 5056283 ACAGGTCCACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAA 5056341 Query 33211 TGTCAT 33216 | |||| Sbjct 5056342 TATCAT 5056347 >seq27380 Length=10165399 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 32803 C 32803 | Sbjct 7666631 C 7666631 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||| | || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 7668621 ATCTTTTATGTAAGTGTCAATAAGCAGACTATACATTTCAGAATGTATGTTTTCCATGGC 7668680 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | || || |||||||| |||||| | |||||| || Sbjct 7668681 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 7668740 >seq17644 Length=22291198 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | Sbjct 3010774 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 3010715 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 3010714 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 3010655 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||| ||| || || Sbjct 3010654 AGGCTCCAGGTAAATAGC 3010637 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || |||||||| ||||| || || || || |||||||| || | || || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGGAA 3024266 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | | Sbjct 3021680 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 3021621 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 3021620 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 3021561 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 3021560 CTGTTTCTTATACCATA 3021544 Score = 105 bits (116), Expect = 8e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| |||||||||||||| | || || ||||| || || || || || | Sbjct 2993725 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 2993666 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | ||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 2993665 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 2993606 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAG 63977 ||| ||||| || || ||| | || | |||||||| |||||||||| Sbjct 2993605 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATAG 2993558 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 3016586 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 3016527 Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549 ||||||| ||||||||||||| |||||| | || ||||| || ||||| || | Sbjct 3016526 AATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 3016467 Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62609 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 3016466 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 3016407 Query 62610 TCTTATTAGA 62619 ||||| || Sbjct 3016406 GTTTATTTGA 3016397 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 ||||| | ||| |||| | || || || || || | || || ||||| ||||||||| Sbjct 3000269 CTAGAAAGTTGTGGACGGTTGGTACCAGCGTTGAAGAGAGTGGGCGAAGCATGAGTAAAC 3000210 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 || | |||||||| ||||| || || ||||| |||| || || || || || || Sbjct 3000209 CACCTCTCAGAAAGAAGATTATATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATC 3000150 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 || || | || | ||| ||||| ||||| ||||||||| Sbjct 3000149 CCCACAGATACTCTCATCAACATATGCTGTGGTCTTTCA 3000111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633402926191200