Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq15423 102 6e-17 seq19202 93.3 3e-14 seq9653 93.3 3e-14 seq23666 87.8 1e-12 seq20843 86.0 4e-12 seq26070 84.2 2e-11 seq24834 84.2 2e-11 seq18140 84.2 2e-11 seq9574 84.2 2e-11 seq5696 84.2 2e-11 seq20631 82.4 5e-11 >seq15423 Length=9779632 Score = 102 bits (112), Expect = 6e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || ||| | ||||| | ||||| || || |||||| | ||| ||| | Sbjct 6864344 CAAAATGCAGATTTTTGTGAAAACTCTTACGGGGAAGACTATTACCCTCGAAGTTGAACC 6864403 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || ||| | | || | ||| ||||| ||||| || || | ||| | Sbjct 6864404 CTCGGATACGTTAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGA 6864463 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 6864464 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 6864523 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATG 22040 ||| ||||||| ||| |||||||| ||| || Sbjct 6864524 CAACATTCAGATGGAGTCTACTCTGCATCTG 6864554 >seq19202 Length=12282305 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || || ||||| | ||||| || ||||| ||| | | ||| | Sbjct 12257268 CAAAATGCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCAATGTTGAACC 12257209 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || ||| | | || | ||| || || ||||| || || | ||| | Sbjct 12257208 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 12257149 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || || || |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 12257148 TCAGCAAAGCCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTA 12257089 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| |||||||||||| | || || Sbjct 12257088 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTT 12257053 >seq9653 Length=10725 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || || ||||| | || || || ||||| ||| | | | ||| | Sbjct 1906 CAAAATGCAGATTTTCATGAAAACCCTCACAGGGAAGACCATCACCCTCAAGGCTGAACC 1965 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || | | | || | ||| || || ||||| || || | ||| || Sbjct 1966 CTCGGATATGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAA 2025 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 2026 TCAGCAAAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 2085 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| |||||||||||| | || || Sbjct 2086 CAACATTCAGAAGGATTCTACTCTTCATCTTGTGTT 2121 >seq23666 Length=5806929 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| | || || || ||||| ||| | || ||| | Sbjct 828904 CAAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCAAAGTTGAACC 828845 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || | | | | || | ||| || || ||||| || || | ||| | Sbjct 828844 CTCGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 828785 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 828784 TCACCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTA 828725 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| |||||||||||| | || || Sbjct 828724 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTT 828689 >seq20843 Length=21849567 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || || ||||| |||||||||||||| ||||| |||| | | | ||| || | || ||| Sbjct 16593777 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGGTGGACATACTTTGTCTGACTAC 16593836 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 |||||||| ||||| |||||||||||| | || || Sbjct 16593837 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 16593871 >seq26070 Length=4351986 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| | || || || ||||| ||| | || ||| | Sbjct 512595 CAAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACC 512654 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || ||| | | || | ||| || || ||||| || || | ||| | Sbjct 512655 CTTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 512714 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| ||||| | ||| || | || || Sbjct 512715 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGACGGACGTACTCTGTCTGACTA 512774 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| |||||||||||| | || || Sbjct 512775 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTT 512810 >seq24834 Length=2526834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| | ||||| || ||||| ||| | || ||| | Sbjct 598688 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTTGAGGTTGAACC 598629 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || ||| | || | ||| || || ||||| || || | ||| | Sbjct 598628 CTCGGATACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 598569 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 598568 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTA 598509 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||| ||||| || ||||||||| | || || Sbjct 598508 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 598473 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||||| |||||||||||||| ||||| |||||| | ||| || | || ||| Sbjct 2358967 CAACAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTAC 2359026 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| ||||| || ||||||||| | || || Sbjct 2359027 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 2359061 >seq18140 Length=5205659 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| | || || || ||||| ||| | || ||| | Sbjct 3938809 CAAAATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACC 3938750 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || ||| | | || | ||| || || ||||| || || | ||| | Sbjct 3938749 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 3938690 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||| ||||||| |||| |||||| | ||| || | || || Sbjct 3938689 TCAGCAAAGACTGATCTTTACTGGCAAGCAACCGGAAGATGGACGTACTTTGTCTGACTA 3938630 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| |||||||||||| | || || Sbjct 3938629 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTT 3938594 >seq9574 Length=15603535 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||| | || || || ||||| | ||||| || | ||| ||| | || ||| | Sbjct 15090196 CAAAATGTAGATTTTCATGAAAACCCTTACGGGGAAGATCATCACCCTCGAGGTTGAACC 15090255 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || ||| | | || | ||| || || ||||| || || | ||| | Sbjct 15090256 CTCGGATACGATAGAAAATATAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 15090315 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| |||| |||||| | ||| || | || || Sbjct 15090316 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACCGGAAGATGGACGTACTCTGTCTGACTA 15090375 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| ||||||||||| || ||||||||| | || || Sbjct 15090376 CAACATTCAGAAGGAGTCCACTCTTCATCTTGTGTT 15090411 >seq5696 Length=1770758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| | ||||| || ||||| ||| | || ||| | Sbjct 1423976 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 1424035 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || ||| | | || | ||| || || ||||| || || | ||| | Sbjct 1424036 CTTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1424095 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 1424096 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 1424155 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATG 22040 ||| |||||| |||| |||||||||||| || Sbjct 1424156 CAACATTCAG-AGGAGTCTACTCTTCATCTG 1424185 >seq20631 Length=3741062 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || || ||||| |||| ||||||||| |||||||||||| | ||| | | || ||| Sbjct 1077979 CAGCAAAGACTGATCTATGCTGGCAAGCAACTAGAAGATGGACGTACTCTCTCTGACTAC 1078038 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| ||||| |||||||||||| |||| || Sbjct 1078039 AACATTCAAAAGGAGTCTACTCTTCATCTGGTGTT 1078073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357998565708388