Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq19809 118 1e-21 >seq19809 Length=37303394 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| || | Sbjct 33037861 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 33037802 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| || || || ||||| ||||| || | ||| || ||||| ||||| |||| |||| Sbjct 33037801 TGCCCCAAGCAGAGAACCATGACCCAGACGTCAAGGAGCATGTGAATTCCCTGGGGGAAA 33037742 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||| | |||| | ||||| Sbjct 33037741 AGCTGAAGACCTTCAGGCTGAGGCTGCG 33037714 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || ||||| || ||||||||||||||||| |||||||| || || |||||| Sbjct 33035528 AGCTCCAAGAGAAAGGCATCTACAAAGCCATGAGTGAGTTTGACATCTTCATCGACTACA 33035469 Query 10140 TAGAAGCATACATGACAATTAA 10161 ||||||| ||||||||||| || Sbjct 33035468 TAGAAGCCTACATGACAATGAA 33035447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552516979058880