Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq13033 84.2 2e-11 >seq13033 Length=3880709 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || ||| || ||||| || || || || ||||| || || || Sbjct 3665180 ATGCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCT 3665239 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| |||| ||||| || || |||||| || |||||||| || Sbjct 3665240 GAGAGCGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGT 3665299 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || || ||||||||||| ||||| || | |||||| | |||| Sbjct 3665300 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCG 3665359 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || ||||| || || || || ||||| || |||||| Sbjct 3665360 ACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATC 3665410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451839789543120