Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2233 122 1e-22 seq13033 116 4e-21 seq7161 109 6e-19 seq17446 104 3e-17 seq16305 100 3e-16 seq20385 89.7 6e-13 seq24317 87.8 2e-12 seq17755 84.2 2e-11 >seq2233 Length=2295209 Score = 122 bits (134), Expect = 1e-22 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||||| ||||| |||| || ||| || ||||| |||||||| || Sbjct 1388464 GCCCCCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGA 1388405 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||||| || Sbjct 1388404 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 1388345 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||| ||| |||||| ||| | | | | ||||| || | ||||| Sbjct 1388344 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTAGGCTCCAC 1388285 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| || | ||| ||||| ||||| || || || ||||| ||||||||| Sbjct 1388284 CTCCAGGGTTACGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 1388233 >seq13033 Length=3880709 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | |||| |||||| |||| || ||| || ||||| |||||||| | Sbjct 3665181 TGCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 3665240 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||| ||||| || ||||||| ||||||||||| | | Sbjct 3665241 AGAGCGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTG 3665300 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| || || |||| || | | ||||| || | || | Sbjct 3665301 GGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 3665360 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| |||||||| || || || |||||||| ||||| Sbjct 3665361 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 3665409 >seq7161 Length=8644359 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || ||| || ||||| |||||||| || || ||| | | Sbjct 6018510 CGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGTGGCCA 6018569 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||| |||| ||| ||||||| ||||||||||| | || | | ||||||| Sbjct 6018570 TCCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 6018629 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || || || |||| || | | ||||| || | || || || | |||||| Sbjct 6018630 TCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 6018689 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || |||||||| ||||| Sbjct 6018690 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6018724 >seq17446 Length=896517 Score = 104 bits (114), Expect = 3e-17 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTC-GGATAGAGTGCGCTCGTCGT-CGAGCTGCTTGCCGGCG 46459 ||| || ||||| |||||||| ||| | |||||| ||| | | ||||||||||| || Sbjct 702147 CTCTTTCTGGATGTTGTAGTCAGGAAATAGTGCGG--GTCTTTCTAGCTGCTTGCCTGCA 702090 Query 46460 AATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGC 46519 || || | | ||||||||||| || | || ||||| ||| |||||| ||| | Sbjct 702089 AAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 702030 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | | ||||| || | ||||| |||| |||||||| ||||| ||||| || || Sbjct 702029 TTTTCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 701970 Query 46580 ACAAAGATTTGCATTTTG 46597 || ||||| ||||||||| Sbjct 701969 ACGAAGATCTGCATTTTG 701952 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||||| ||||| |||| || ||| || ||||| ||||| || || Sbjct 702414 GCCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGA 702355 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||||| || Sbjct 702354 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 702295 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||| ||| |||||| ||| | | | | ||||| || | ||||| Sbjct 702294 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 702235 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAG 46572 |||| |||||||| ||||| || || Sbjct 702234 TTCCAGGGTGATGGTCTTGCCGGTGAG 702208 >seq16305 Length=36878 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||||| ||||| ||| || ||| || ||||| ||||| || || Sbjct 3041 GCCACCCCTCAGACGCAGGACCAGGCGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGA 3100 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| |||| || ||||||||||| || || || | | |||||||||| || Sbjct 3101 AAGAGTGCGGCCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGAGGGG 3160 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || || || || |||||| ||| | | | | ||||| || | ||||| Sbjct 3161 GATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 3220 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 3221 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 3268 >seq20385 Length=15889662 Score = 89.7 bits (98), Expect = 6e-13 Identities = 149/215 (69%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 46386 CCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGA 46445 |||| |||| || ||| || ||| | |||||||| || ||||||| | || | | Sbjct 15770366 CCAGGTGCAGGGTCGACTCTTTCTGGGTGTTGTAGTCAGAAAGAGTGCAGCCATCTTTCA 15770425 Query 46446 GCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 46505 |||||||||| || || || | | ||||||||| | || | || ||||| ||| || Sbjct 15770426 GCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGTGGGGATGCCTTCCTTATCCTGGA 15770485 Query 46506 TCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCG---TGATGGTTT 46562 |||| ||| | | | ||||| || | ||||| |||| | ||||||| | Sbjct 15770486 TCTTGGCCTTCACATTTTAGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGATGGTCT 15770545 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||| || || |||||||| ||||||||| Sbjct 15770546 TGCCGATCAGGGTCTTCACAAAGATCTGCATTTTG 15770580 >seq24317 Length=2447881 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | |||| |||||| |||| || ||| || ||||| |||||||| | Sbjct 1085107 TGCCACCTCACAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 1085166 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| || || ||||| |||||||| ||||||| ||||||||||| | | Sbjct 1085167 AGAGCGTGCGGCTATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTG 1085226 Query 46485 GCACGCTCTCCTTGTC 46500 | | | ||||||||| Sbjct 1085227 GGATACCCTCCTTGTC 1085242 >seq17755 Length=25620257 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | |||| |||||| |||| || ||| || ||||| |||||||| | Sbjct 14325066 TGCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 14325007 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||| ||||| || |||| || ||||||||||| | | Sbjct 14325006 AGAGCGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAATACCAGACGCTGCTGGTCAGGTG 14324947 Query 46485 GCACGCTCTCCTTGTC 46500 | | | ||||||||| Sbjct 14324946 GGATACCCTCCTTGTC 14324931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565034052187440