Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq12132 381 7e-101 seq22719 356 3e-93 seq23499 327 1e-84 seq27123 183 3e-41 seq24714 158 1e-33 seq27380 125 8e-24 seq18140 107 2e-18 seq17644 98.7 1e-15 >seq12132 Length=2475592 Score = 381 bits (422), Expect = 7e-101 Identities = 640/913 (70%), Gaps = 22/913 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||||| ||||||||||||| || || || ||| |||||||| Sbjct 57350 TTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 57293 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| | ||| || | ||| ||| Sbjct 57292 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTC 57233 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || | || || | ||| | | Sbjct 57232 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATA 57173 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| | || ||||| | ||| ||| ||||| | | || ||||| || || | Sbjct 57172 AGTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGC 57113 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 || ||||| | || || || || || || |||||||| || || | ||||| | || Sbjct 57112 TTCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATA-ATTA 57055 Query 18910 GATA-CA-ACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 | || ||||| || || || || || || ||||| ||||||| || |||| Sbjct 57054 TTTCGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAA 56995 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 ||||||| |||| ||||| ||||| || || | ||||||||||||||| | ||||||| Sbjct 56994 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 56935 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 ||||||||| ||| || | ||||||||| || ||||| || ||||||||||| || |||| Sbjct 56934 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 56875 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 | ||||| ||||| || || | | ||| ||||| |||| | || | |||||| Sbjct 56874 CCACTGCAGCAAAGGCTACGCG-CGTTCACCATAGGTAGCCTGTTTGTCCCCAATCCAGC 56816 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 || |||||||| | |||| || ||||| ||||| || || || | ||| || ||| Sbjct 56815 GCAAGGCCCAATCTGACTTC---TTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAA 56759 Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA----ACTGTACATTTCT 19263 | | || | | |||||| |||| | | ||||||| ||| |||||||| Sbjct 56758 ATTCCCTTTCGTTGGGATCTTT----TATGTAAGTGTCAATAAGGAGACTATACATTTCA 56703 Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323 ||||| || ||||| || || || || || || || ||||| | |||||||| ||||| Sbjct 56702 GAATGTATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGA 56643 Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383 ||||| ||||| || ||||| |||||||| ||||| ||||||| |||||||| Sbjct 56642 ACTTCTTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAT 56583 Query 19384 AATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATT 19442 || || | || || ||||| | | | || || | | || | | ||| ||| | Sbjct 56582 AAAGCCAGAACGTGGGATATAAAGTATCTCTCCTC-GGGCTTCAGGGATTCCCAGTGCCA 56524 Query 19443 AATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATA 19502 ||| || || || | || || || || | ||||| || || ||||| || || ||||| Sbjct 56523 AATGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATA 56464 Query 19503 CATGTTCCATATA 19515 ||||| ||| ||| Sbjct 56463 CATGTGCCAGATA 56451 >seq22719 Length=8987742 Score = 356 bits (394), Expect = 3e-93 Identities = 644/937 (69%), Gaps = 30/937 (3%) Strand=Plus/Minus Query 18616 AAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATTTTTT 18673 || ||| ||||||| | ||||||||||||| || || || ||| |||||||| | | Sbjct 8555348 AAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATCCTCT 8555291 Query 18674 GATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCCA 18733 |||| ||| | ||||| || |||||||| ||||| ||||| || | ||| ||| |||| Sbjct 8555290 GATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTCCA 8555231 Query 18734 TAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGTC 18793 |||| |||||||||| | ||| | | | || | || || | ||| | | |||| Sbjct 8555230 TAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAAGTC 8555171 Query 18794 TATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAA 18853 | || || ||||| | ||| ||| ||||| | | |||||||| || || | || | Sbjct 8555170 TGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTTCA 8555111 Query 18854 CAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAATAGAT 18912 |||| | || || || || || || |||||||| || || | | ||| | || | Sbjct 8555110 CAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TCATAATTATTTCT 8555052 Query 18913 ACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCA 18972 ||||| || || || || || | ||||| ||||||| || ||||||||| Sbjct 8555051 CTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAAAATCA 8554992 Query 18973 CAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGT 19032 || |||| ||||| ||||| || || | ||||||||||||||| | |||||||||||| Sbjct 8554991 CAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGT 8554932 Query 19033 CCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACT 19092 |||| ||| || | ||||||||| || ||||| || ||||||||||| || ||||| ||| Sbjct 8554931 CCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACT 8554872 Query 19093 GCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGT 19152 || ||||| || || | | ||| ||||| |||| || || | |||||| || Sbjct 8554871 GCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAG 8554812 Query 19153 GCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATA 19212 |||||||| |||||||| | ||||| ||||| || || || | ||| || ||| | Sbjct 8554811 GCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAAATTCC 8554752 Query 19213 CGCTCATCTGTATCTTTAACATATGCATCTATCAAT----AAACTGTACATTTCTGAATG 19268 | || | | |||||| |||||| | ||||| ||||| |||||||| ||||| Sbjct 8554751 CTTTCGTTGGGATCTTT----TATGCAAGTGTCAATAAGGAAACTATACATTTCAGAATG 8554696 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || |||| | | |||||| ||||| ||||| Sbjct 8554695 TATGTTTTCCATGGC--------------AATAACAGCGGGTTTCTGTAATCTGAACTTC 8554650 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | |||| || ||||| |||||||| ||||| ||||||| |||||||| || || Sbjct 8554649 TTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAGC 8554590 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAATAT 19447 | || || ||||| | | | || | || | || | | ||| ||| | ||| | Sbjct 8554589 CAGAACGTGGGATATAAAGTATCTCTCCT-TGGGCTTCAGGGATTCCCAGTGCCGAATGT 8554531 Query 19448 CTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGT 19507 | || | | || || || || | ||||| || || ||||| || || |||||||| | Sbjct 8554530 CCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACATCT 8554471 Query 19508 TCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 ||| |||| | || | || || || || ||||| Sbjct 8554470 GCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 327 bits (362), Expect = 1e-84 Identities = 549/788 (70%), Gaps = 22/788 (3%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | ||||||||||||| || || || ||| |||||||| Sbjct 2215562 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGATTTGACATCACTCCCATC 2215619 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| || | ||||| | |||||||| ||||| ||||| || | ||| ||| Sbjct 2215620 CTCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 2215679 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || | || || | ||| | | Sbjct 2215680 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATA 2215739 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || || ||||| ||| | | ||||| | | || ||||| || | | Sbjct 2215740 AGTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGC 2215799 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAAT 18908 || ||||| | || || || || || || || |||| || || | ||||| | || Sbjct 2215800 TTCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGAACAGCAT-TGATAATTAT 2215858 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | || || || || || || || | ||||| ||||||| || ||||| Sbjct 2215859 TTCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAA 2215918 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||||| |||| ||||| ||||| || || | ||||||||||||||| | |||||||| Sbjct 2215919 ATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCAT 2215978 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 |||||||| ||| || | ||||||||| || ||||| || ||||||||||| || ||||| Sbjct 2215979 CAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTC 2216038 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||||| ||||| || || | | ||| ||||| || | || || | | |||| | Sbjct 2216039 CACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGTG 2216098 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || ||||| || |||||||| || ||||| ||||| || || | | ||| || ||| | Sbjct 2216099 CAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAAA 2216158 Query 19209 ----CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA----ACTGTACATT 19260 | | |||| | |||||| |||| | | ||||||| ||| |||||| Sbjct 2216159 TTCCCTTTCGCT----GGGATCTTT----TATGTAAGTGTCAATAAGGAGACTATACATT 2216210 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || ||||| || ||||| | || || || ||||| || ||||| | |||||||| ||| Sbjct 2216211 TCAGAATGTATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATC 2216270 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || || || | ||||| || ||||| |||||||| ||||| || | ||| |||||| Sbjct 2216271 TGAACCTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCA 2216330 Query 19381 AAAAATGC 19388 || || || Sbjct 2216331 AAGAAAGC 2216338 >seq27123 Length=4923932 Score = 183 bits (202), Expect = 3e-41 Identities = 419/628 (67%), Gaps = 6/628 (1%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || | |||||| || |||| || ||| | ||| || | | | ||||||| | Sbjct 3337725 TCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTGGTTCTTCCT 3337669 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | || ||||| | || | |||| || || | || || |||||| || || | | Sbjct 3337668 TTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 3337609 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | || || | | | || || | || || | |||||||| | ||||| || || |||| Sbjct 3337608 AAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGTGTTGT 3337549 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 |||| ||||| | ||| | |||| ||| | || | ||||| || || | || || | Sbjct 3337548 TATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAACGTAGC 3337489 Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 | ||| ||| | ||| ||| | | || ||| || || || || |||||| || | Sbjct 3337488 TGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGAAATCA 3337429 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570 ||||| |||| || || |||||||| ||||| || || |||||| ||||| | | | Sbjct 3337428 ATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACTCAGAA 3337369 Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630 ||||| | ||||| | ||| || | || || | ||| || | ||||| || |||| Sbjct 3337368 GAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGAAGCAT 3337309 Query 48631 GAATAAACCATTTCTCTG--ATAACAATTTATA-TGTTTCAATAACAGAATCTATATCCC 48687 || ||||||| |||| | | || | | | | ||||||||| | ||| || || Sbjct 3337308 GAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAATGTCTT 3337249 Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 || || || || | |||||| | ||| ||||||| || ||| ||||| | | ||| Sbjct 3337248 CTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCACTTTTC 3337189 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807 ||| || ||||| | ||| || || | | ||||||||||| |||||||| || | Sbjct 3337188 CATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTAAGAGA 3337129 Query 48808 AGTCGTTATCATTAATAATTGATGAATT 48835 | || | ||| ||||| | ||||| Sbjct 3337128 AATCTTGGTCACAGATAATAGCAGAATT 3337101 >seq24714 Length=5211462 Score = 158 bits (174), Expect = 1e-33 Identities = 385/571 (67%), Gaps = 27/571 (5%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTA----GT----CCCTCGTCTCTACTTATCAATTCATTAGAAA 19012 || ||||||||||| |||| || ||||| || || || || | |||||| |||| Sbjct 5055790 CAAGCAAAATCACAGTGTAAACTGTTAAACCCTCATCACTGCTAATAAGTTCATTGGAAA 5055849 Query 19013 ATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAG 19072 |||| | |||| |||||||| | ||| || | |||||||| || || || || |||| Sbjct 5055850 ATGTGAGGCCAGACATCAGTCATTGTTTCTTGAGGCAGAATATCGATGCGAAAGAACCAG 5055909 Query 19073 AAAAGAATATACCTTCTACTGCTGCAAA---AGCAACTAGTCTTTCTCCATAACTAGCAT 19129 || |||| | ||||||| || ||||| ||||| || |||||||| |||||| Sbjct 5055910 AAGAGAAGGTGCCTTCTA-TG--GCAAAGGCTGCAACAAG---TTCTCCATGGGTAGCAT 5055963 Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189 | || || |||||| || |||||||| |||| || | ||||| ||||| | | Sbjct 5055964 CTTTGTTCACAATCCAACACAAGGCCCAATCTGCCTCCTCCCTGACACAAGGCATCCTTT 5056023 Query 19190 CTATAGAATTAAATAGATACATACGCTCATCTG-TATCTTTAACATATGCATCTATCAAT 19248 | || | ||| || ||| | | | | | || | |||||||||| || || || || Sbjct 5056024 CAATGGCATTGAAGAGA-AATTCCATTTCTTTGTTGTCTTTAACATGTG--TCAATAAAG 5056080 Query 19249 AAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTT 19308 | | | | ||| || |||| || ||||| ||||| || || || || || || || Sbjct 5056081 AGATTATCCATGTCAGAATAGATGTTTTCCATAGCAATTTGGAAGCCATAGAAGCA---G 5056137 Query 19309 GCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCA 19368 | |||||| ||| ||||| |||| || ||||| |||| || |||| | ||| Sbjct 5056138 GTTTCTGTAGCCTGAACTTCTTGGACAAATTGCTCCACCAAGTTTTTATCAACTGTGCCA 5056197 Query 19369 TCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT 19428 || | |||||||| || | | | || ||||||| | |||| || | | || | Sbjct 5056198 TCGCATGCTGCAAAGAAAGTCAGAATATTGGATATAAAATATCTTTCCTCAG-GCTTCAG 5056256 Query 19429 GTATTCC-AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGC 19487 | |||| | | | ||| ||||| || | || || || | | ||| || ||| Sbjct 5056257 GGCTTCCTAGTGCTGAATGTCTTTGGACAGGTCCACCTCCTGGGCCATCCGGAAGGAAAT 5056316 Query 19488 CTCTGCTTTTTTATACATGTTCCATATATCA 19518 ||||||||| ||||| || ||||| |||||| Sbjct 5056317 CTCTGCTTTCTTATA-ATTTTCCAAATATCA 5056346 >seq27380 Length=10165399 Score = 125 bits (138), Expect = 8e-24 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | ||||||||||||||| | |||||||||||||||| ||| | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || ||||| ||||| ||||| | Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 19103 CAAC 19106 | || Sbjct 7666631 CTAC 7666634 Score = 109 bits (120), Expect = 6e-19 Identities = 113/146 (77%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | ||||||||||||| || || || ||| |||||||| Sbjct 7664670 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 7664727 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| ||| Sbjct 7664728 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 7664787 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 |||||||| ||||||||||| | ||| Sbjct 7664788 TCCATAAAGTCAAATGGATTCTCTAC 7664813 >seq18140 Length=5205659 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | || ||||| || |||||||| ||| Sbjct 751639 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTTTTCTTT 751580 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 | ||||||||||| |||||| ||||| || ||||| | |||||||| || || || || Sbjct 751579 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 751520 Query 19105 ACTAGTCTTTCTCC 19118 || | |||||| || Sbjct 751519 ACCACTCTTTCCCC 751506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 ||||| || | ||||| ||| ||||||||||| |||||||| ||||| || || |||| Sbjct 760723 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 760664 Query 18733 ATAAAATCAAATGGATTTT 18751 ||||||||||| ||||||| Sbjct 760663 ATAAAATCAAAAGGATTTT 760645 >seq17644 Length=22291198 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || |||| || || || || || ||||| ||||| Sbjct 3021677 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 3021618 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| || | || |||||||| || ||||||||||| | |||| | ||| || Sbjct 3021617 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 3021558 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 3021557 TTTCTTATACCATA 3021544 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | ||| || || | Sbjct 3024436 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 3024377 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || |||||||| || |||||||| ||||| ||||| | | || | Sbjct 3024376 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 3024317 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || ||||| || |||||||||| ||| || | ||| || || Sbjct 3024316 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAAGTCATCAGG 3024268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561905583616080