Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq16305 109 4e-19 seq13033 109 4e-19 seq7161 100 2e-16 seq24529 96.9 3e-15 seq19391 96.9 3e-15 seq18305 96.9 3e-15 seq9996 93.3 3e-14 seq21427 91.5 1e-13 seq17940 91.5 1e-13 seq24317 89.7 4e-13 seq17446 89.7 4e-13 seq27641 86.0 5e-12 seq16235 84.2 2e-11 >seq16305 Length=36878 Score = 109 bits (120), Expect = 4e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || ||||| || || |||||||| | | ||| | | | || |||| ||||| Sbjct 3069 AGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCTTCCAGCTGCTTG 3128 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 |||||||| || | | ||| || ||| | || ||||||||||||||||| || || Sbjct 3129 CCTGCAAAGATGAGCCTCTGCTGGTCGAGGGGGATGCCTTCTTTATCTTGGATCTTGGCC 3188 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || ||| |||| | |||||| | ||||| || || |||| || |||||||| | Sbjct 3189 TTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGG 3248 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || || || |||||||| Sbjct 3249 GTCTTCACGAAGATCTGCAT 3268 >seq13033 Length=3880709 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || || | | |||| |||| || Sbjct 3665207 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTGT 3665266 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| |||||| || || || || || || || || ||||||||||| Sbjct 3665267 TTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 3665326 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 3665327 GCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTG 3665386 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 3665387 AGGGTCTTCACAAAGATCTGCAT 3665409 >seq7161 Length=8644359 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || || | |||| |||| || Sbjct 6018522 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGTGGCCATCCTCCAGCTGT 6018581 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || | |||||||||| |||||| || || || || || || || || ||||||||||| Sbjct 6018582 TTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 6018641 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 6018642 GCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTG 6018701 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 6018702 AGGGTCTTCACAAAGATCTGCAT 6018724 >seq24529 Length=32172056 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || ||| | | ||| |||| || Sbjct 9537377 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCTATCCTCCAGCTGT 9537436 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| | |||| || || || | || || || || ||||||||||| Sbjct 9537437 TTGCCGGCAAATATCAGATGCTGCTGGTCAGGTTGGATACCCTCCTTCTCTTGAATTTTG 9537496 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || |||||| | || || ||||| |||| || ||||| | Sbjct 9537497 GCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATG 9537556 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 9537557 AGGGTTTTCACAAAGATCTGCAT 9537579 >seq19391 Length=1377628 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || || || || || ||||| || | || ||| | | |||| |||| | || Sbjct 1322782 AGGGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTATTTG 1322723 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || |||||||||| || |||||| || || | || ||||| || ||||||||||| | Sbjct 1322722 CCGGCAAATATCAGACACTGTTGGTCAGGTGAGATACCTTCCTTGTCTTGAATTTTGGCT 1322663 Query 101390 TTTACAATTTCTACAG---TGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| ||| ||||| | || |||||||| |||| || ||||| | Sbjct 1322662 TTGACA--TTCT-CAGTGATGTCACTGGGCTCGACTTCAAGGGTGATGGTCTTGCCCATC 1322606 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 1322605 AGGGTCTTCACAAAGATCTGCAT 1322583 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || | || || || ||||| || | || ||| | | |||| |||| | || Sbjct 1237306 AGGGTGGACTGCTTCTGGATGTTGTAGTCTGAGAGAGTGCAGCCATCCTCCAGCTATTTG 1237365 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || |||||||||| | ||| || || | | || || || || ||||||||||| | Sbjct 1237366 CCGGCAAATATCAGATGCTTCTGGTCAGCTGAGATACCCTCCTTGTCTTGAATTTTGGCT 1237425 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || ||| | || | |||||| | || |||||||| |||| || ||||| | | Sbjct 1237426 TTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGTCTTGCCCATGAGG 1237485 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || ||||| |||||||| Sbjct 1237486 GTCTTCACAAAGATCTGCAT 1237505 >seq18305 Length=10871756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || ||| | | ||| |||| || Sbjct 4253464 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCAGCCATTCTCCAGGTGT 4253523 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| || ||| || || || || || || || || ||||||||||| Sbjct 4253524 TTGCCGGCAAACATCAGACACTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 4253583 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 | | ||| | || | |||||| || | || ||||| |||| || ||||| || Sbjct 4253584 GCTCTGACATTCTCAATGGTGTCACTAGTCTTGACCTCAAGGGTGATGGTCTTGCCTGTG 4253643 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || ||||| |||| ||| Sbjct 4253644 AGAGTCTTCACAAAGATCTACAT 4253666 >seq9996 Length=19681183 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || | | | |||| |||| || Sbjct 16335115 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGACTG--CGGCCATCCTCCAGCTGT 16335172 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || | |||||||||| | |||| || || || || || ||||| || ||||||||||| Sbjct 16335173 TTGCTAGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGAATTTTG 16335232 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 16335233 GCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCCGTG 16335292 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| | |||||| Sbjct 16335293 AGGGTCTTCACAAACACCTGCAT 16335315 >seq21427 Length=8993756 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| | ||||| || || ||||| || | || ||| | | || | |||| || Sbjct 3259648 TGCAGGGTGAACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCACCCTCCATCTGT 3259707 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| || || || || | || || || || || ||||||||||| Sbjct 3259708 TTTCCGGCAAAGATCAGACACTACTGGTCAGATGGGATACCCTCCTTCTCTTGAATTTTG 3259767 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | ||| || ||||| |||| || ||||| || Sbjct 3259768 GCTTTGACATTCTCAATGGTGTCACTGGATTCTACCTCAAGGGTGATGGTCTTGCCTGTG 3259827 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 3259828 AGTGTCTTCACAAAGATCTGCAT 3259850 >seq17940 Length=33973456 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || |||||||||| || ||| || || ||| | ||||||||||| ||||| ||||| | Sbjct 6339102 CCCGCAAATATCAGACACTGCTGGTCAGGCAGGATGCCTTCTTTGTCTTGGATTTTAGCT 6339043 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || | | | || | |||||| | ||||| ||||| ||||| || ||||| || | Sbjct 6339042 TTGAAATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGACAGTCTTGCCCGTGAGG 6338983 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || ||||| |||||||| Sbjct 6338982 GTCTTCACAAAGATCTGCAT 6338963 >seq24317 Length=2447881 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/214 (70%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || || | | ||| |||| || Sbjct 1085133 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCTATCCTCCAGCTGT 1085192 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT-- 101384 || || |||||||||| |||||| || || || || || || || || |||||||||| Sbjct 1085193 TTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 1085252 Query 101385 --TTTGTT--TTACAAT-TTC----TACAGTGTCAGACGTTTCCACTTCAAGAGTGACCG 101435 |||| | | ||| | ||| || ||||||| | || || ||||| |||| | Sbjct 1085253 GCTTTGGTCATGACACTATTCTCAATATAGTGTCACTGGGCTCGACCTCAAGGGTGATGG 1085312 Query 101436 TTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||| || | || || ||||| |||||||| Sbjct 1085313 TCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 1085346 >seq17446 Length=896517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATC-GGCGATAGTTCTGGCATCGTCCAATTGCTT 101328 ||||| || ||||| || || ||||| || || ||||| | || | || | ||||| Sbjct 702155 AGGGTCGACTCTTTCTGGATGTTGTAGTCAGGAAATAGTGCGGGTCTT-TCTAGCTGCTT 702097 Query 101329 ACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTG 101388 |||||||| || | | ||| || ||||| ||||||||||| ||||| || || || Sbjct 702096 GCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGC 702037 Query 101389 TTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAA 101448 || ||| |||| | |||||| | ||||| || || |||| || ||||| || | Sbjct 702036 CTTCACATTTTCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAG 701977 Query 101449 AGTTTTTACAAATATCTGCAT 101469 || || || || |||||||| Sbjct 701976 GGTCTTCACGAAGATCTGCAT 701956 >seq27641 Length=16599674 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| ||||| || ||||| || ||||| || | | ||| | || |||| ||| Sbjct 1039237 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCGTCTTCCAGTTG 1039178 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | || ||||| || ||||||||||| ||||| || | | | Sbjct 1039177 CTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGA-TCT 1039119 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | | || || |||||| || || || | ||| || | || |||| || || || || Sbjct 1039118 TGGCCTTTCATTTTCTATCGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCTGT 1039059 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | |||||| Sbjct 1039058 ACGGGTTTTCACGAAAAGCTGCAT 1039035 >seq16235 Length=7452127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| || ||||| || || ||| | || | || | | | |||| |||| || Sbjct 4796027 ATGCAGGGTGGACTCTTTCTGGATGTTGCAGTCTGAGAGACTGTGGCCATCCTCCAGCTG 4796086 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || |||||||||| | |||| || || | || || ||||| || ||||||||||| Sbjct 4796087 TTTGCCGGCAAATATCAGATGCTGCTGGTCAGATGGGATACCTTCCTTGTCTTGAATTTT 4796146 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | | | |||||| | || || ||||| |||| || ||| | | Sbjct 4796147 GGCTTTGACATTCTTAATGGTGTCACTAGGCTCAACCTCAAGGGTGATGGTCTTGTCTTT 4796206 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || ||||||| |||||||| Sbjct 4796207 GAGGGTCCTTACAAAGATCTGCAT 4796230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396138717065154