Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq12486 82.4 1e-10 >seq12486 Length=6174982 Score = 82.4 bits (90), Expect = 1e-10 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 172455 GGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACT 172514 || || ||| | ||| ||| ||||| || || || ||| | ||| | || || | Sbjct 332317 GGAGTGAAAATCTGGGATGCCAATGGATCCCGAGACTTTCTGGATAGCTTGGGATTCTCC 332258 Query 172515 GAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCT 172574 | ||| ||||||| || || |||||| ||||||| || || ||||| ||| ||||| Sbjct 332257 GCCAGAGAAGAAGGGGACTTGGGCCCAGTTTATGGCTTCCAGTGGAGGCATTTTGGGGCA 332198 Query 172575 CAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAA 172622 |||| | || ||| ||||||| ||||||||||||| |||||| Sbjct 332197 GAATACAGAGATATGGATTCAGATTATTCAGGACAAGGAGTTGACCAA 332150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632260939197360