Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq20631 86.0 6e-12 >seq20631 Length=3741062 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 137257 ||| || | ||||| ||||| || ||||| |||||||| || | || | || | | Sbjct 1078074 CAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTACGTCCA-T 1078016 Query 137258 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 137317 |||| ||||| || |||||||||||||| | ||||||||| ||||| || ||||| || | Sbjct 1078015 CTTCTAGTTGCTTGCCAGCATAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 1077956 Query 137318 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCG 137377 | || || |||| | ||| ||| |||| |||||| || | | || | | Sbjct 1077955 CCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACCTGGAGGGTGATAG 1077896 Query 137378 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| | || | ||||| | ||| || ||||| Sbjct 1077895 TCTTCTCCGTAAGAGTTTTCATGAAAATCTGCAT 1077862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488367379130400