Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq22295 107 6e-20 seq25549 100 9e-18 seq2744 100 9e-18 seq24882 98.7 3e-17 seq19423 98.7 3e-17 seq8065 98.7 3e-17 seq5596 98.7 3e-17 seq7272 87.8 6e-14 >seq22295 Length=2611414 Score = 107 bits (118), Expect = 6e-20 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 610884 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 610943 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 610944 TCCCGGGTTTCGGC 610957 >seq25549 Length=1292801 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244164 ATAGCTGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTTG 244223 Query 2826 ACCCCGGGCTTCAGC 2840 | |||| | ||| || Sbjct 244224 ATCCCGAGTTTCTGC 244238 >seq2744 Length=3603295 Score = 100 bits (110), Expect = 9e-18 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 2760 GTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 || ||||| || ||| |||||||||| ||||||| |||||||||||||||||||||||| Sbjct 99579 GTTTTTATCAGCCGAAATAGCTCAGTTAGGAGAGCGTTAGACTGAAGATCTAAAGGTCCC 99520 Query 2819 TGGTTCAACCCCGGGCTTCAGC 2840 |||||| |||||||| ||| || Sbjct 99519 TGGTTCGACCCCGGGTTTCGGC 99498 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 91689 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCTTGGTTCGATC 91630 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 91629 CCGGGTTTCGGC 91618 >seq24882 Length=4888095 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4372877 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4372936 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4372937 CCGGGTTTCGGC 4372948 >seq19423 Length=11923251 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 962948 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 962889 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 962888 CCGGGTTTCGGC 962877 >seq8065 Length=285216 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 58718 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 58777 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 58778 CCGGGTTTCGGC 58789 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 189878 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 189937 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 189938 CCGGGTTTCGGC 189949 >seq5596 Length=5364348 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2628922 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2628863 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2628862 CCGGGTTTCGGC 2628851 >seq7272 Length=15413533 Score = 87.8 bits (96), Expect = 6e-14 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||| |||||||||||||||||| |||||||||| |||| ||| ||| Sbjct 12383789 GAAATAGCTCAGTTGGAAGAGCATTAGACTGAAGACCTAAAGGTCCTTGGTGCAATCCCA 12383730 Query 2832 GGCTTCAG 2839 || ||||| Sbjct 12383729 GGTTTCAG 12383722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15844586226690