Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq12132 389 5e-103 seq22719 356 3e-93 seq23499 347 2e-90 seq27123 286 5e-72 seq24714 174 2e-38 seq27380 143 4e-29 seq5696 111 2e-19 seq18140 107 3e-18 seq17644 105 9e-18 >seq12132 Length=2475592 Score = 389 bits (430), Expect = 5e-103 Identities = 655/942 (70%), Gaps = 17/942 (2%) Strand=Plus/Minus Query 39266 ATTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCC 39321 |||| |||| |||||| |||| |||| |||| ||| ||| | | |||||| ||||| Sbjct 57356 ATTCATTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 57297 Query 39322 CATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 39381 ||| | || || || || || | ||||| || || ||||| | ||||||| ||| || Sbjct 57296 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAAT 57237 Query 39382 ATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGA 39441 ||| ||||| || ||||| ||||| | | | | || |||| || | ||| Sbjct 57236 ATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAG 57177 Query 39442 AATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501 || | ||| |||| ||||| || |||||| ||||| | || ||||| || || Sbjct 57176 CATAAGTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAAT 57117 Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 ||| || || || | |||||| || || ||||| | ||| || || || | | || Sbjct 57116 GAGCTTCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAAT 57057 Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 ||| |||| ||| || ||| || | || ||||| ||||| | ||| || Sbjct 57056 TATTTCGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGC 56997 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || ||||| |||| ||||||||||| ||||| | ||| |||||||||||||| ||||| Sbjct 56996 AAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGG 56937 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| || || || || |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 56936 CATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCC 56877 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCAT-TATGTATCCACT 39800 ||| ||||| ||||| || || | | || || || ||| | | | ||| ||| | Sbjct 56876 TTCCACTGCAGCAAAGGCTACGCGCGT-TCACCATAG---GTAGCCTGTTTGTCCCCAAT 56821 Query 39801 TCTGTGC-----CCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 | | || |||||| | |||||| ||||||||||| ||||| || ||||| || Sbjct 56820 CCAGCGCAAGGCCCAATCTGA---CTTCTTGACACAAGGCATCGTTTCAATGGCATTGAA 56764 Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915 |||| | | |||| | |||||| | || || || || | |||||||||||||| Sbjct 56763 GAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTC 56704 Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975 ||||| |||||||| || || || || || || || ||||| | ||||| ||||| || Sbjct 56703 AGAATGTATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTG 56644 Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 || ||| ||||| ||| |||| |||||||| ||||| ||||||| || ||||| Sbjct 56643 AACTTCTTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAA 56584 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095 || |||| || || ||||| ||| | || ||||| ||| | ||||| Sbjct 56583 TAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCA 56524 Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 || || || || | || || || || || ||||| || || ||||| ||||| || || Sbjct 56523 AATGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATA 56464 Query 40156 CATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||||| ||| ||| | | || | | || ||||| ||||| Sbjct 56463 CATGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 356 bits (394), Expect = 3e-93 Identities = 640/937 (68%), Gaps = 20/937 (2%) Strand=Plus/Minus Query 39267 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCA 39323 ||| || |||||| |||| || | |||| ||| ||| | | |||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 39324 TTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 39383 | | || || || || || | ||||| || || ||||| || ||||||| ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 39384 TTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAA 39443 | ||||| || |||| ||||| | | | | || |||| || | ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 39444 TCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA 39503 | | ||| ||||| ||||| || |||||| ||||| | |||||||| || |||| Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 8555117 Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563 | || || || | ||||| || || ||||| | ||| || || || | | |||| Sbjct 8555116 GCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATTA 8555057 Query 39564 TCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | | ||||| ||| || ||| || | || ||||| ||||| | ||| || | Sbjct 8555056 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCAA 8554997 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | ||||| |||| ||||||||||| ||||| | ||| |||||||||||||| ||||||| Sbjct 8554996 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 8554937 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | || || || || |||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 8554936 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTT 8554877 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACT 39800 | ||||| ||||| || |||| | || || || | | || || | ||||| Sbjct 8554876 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 8554817 Query 39801 TCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | |||||||| || ||||||| ||||||||||| ||||| || ||||| || ||| Sbjct 8554816 GCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGAA 8554757 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | |||| | |||||| | | || || || | | |||||||||||| |||| Sbjct 8554756 ATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAAT 8554697 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | |||||||| || || || |||| | | ||| ||||| || || | Sbjct 8554696 GTATGTTTTCCATGGC--------------AATAACAGCGGGTTTCTGTAATCTGAACTT 8554651 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 || | |||| ||| |||| |||||||| ||||| ||||||| || ||||| || | Sbjct 8554650 CTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAAG 8554591 Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATAT 40100 ||| || || ||||| ||| | || | ||| ||| | ||||| || | Sbjct 8554590 CCAGAACGTGGGATATAAAGTATCTCTCCTTGGGCTTCAGGGATTCCCAGTGCCGAATGT 8554531 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160 | || | | || || || || || ||||| || || ||||| ||||| || ||||| | Sbjct 8554530 CCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACATCT 8554471 Query 40161 TCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||| |||| | || | || || ||||| ||||| Sbjct 8554470 GCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 347 bits (384), Expect = 2e-90 Identities = 612/889 (69%), Gaps = 12/889 (1%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326 |||| |||||| |||| || | |||| ||| ||| | | |||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || ||||| || | |||| || || ||||| || ||||||| ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| ||||| | | | | || |||| || | ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| ||||| | |||| | ||||| | || ||||| || |||| | Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAGCT 2215800 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566 | || || | ||||| || || ||||| | || | || || | | ||||| Sbjct 2215801 TCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGAACAGCATTGATAATTATTT 2215860 Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626 | |||| ||| || ||| || | | ||||| ||||| | ||| || || | Sbjct 2215861 CTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAAAAT 2215920 Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686 |||| |||| ||||||||||| ||||| | ||| |||||||||||||| |||||||| | Sbjct 2215921 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 2215980 Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746 | || || || |||||||| ||||||| |||||||| ||||||||||| |||||||| | Sbjct 2215981 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTTCCA 2216040 Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCAT-TATGTATCCACTTCTGT 39805 |||| ||||| || || | | || || || ||| | | | ||| ||| | | || Sbjct 2216041 CTGCAGCAAAGGCTACGACACGTTCACCATA---GGTAACCTCTTTGTCCCCAGTCCAGT 2216097 Query 39806 -----GCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 ||||| || || |||||||| ||||||||||| ||||| | ||||| |||||| Sbjct 2216098 GCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAA 2216157 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | |||| |||||| | || || || || | |||||||||||||| |||| Sbjct 2216158 ATTCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 2216217 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | |||||||| | || || || ||||| || ||||| | ||||| ||||| || |||| Sbjct 2216218 GTATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCT 2216277 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 || | ||||| ||| |||| |||||||| ||||| || | ||| || ||||| || | Sbjct 2216278 CTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAG 2216337 Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATAT 40100 ||| || || ||||| | | | || ||||| ||| | ||||| || | Sbjct 2216338 CCAGAACGTGGGATATAAAGTCTCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCGAATGT 2216397 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149 | | || | || || || || || ||||| || || ||||| ||||| Sbjct 2216398 CCTCGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTT 2216446 >seq27123 Length=4923932 Score = 286 bits (316), Expect = 5e-72 Identities = 568/837 (68%), Gaps = 13/837 (2%) Strand=Plus/Minus Query 69593 TAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTAT 69652 ||| || |||||| || ||||| ||||| |||| || ||| |||||||||| | Sbjct 3337734 TAAGTCATTTCATGAAGAGATCTGGAATTGAAAGGGC---AAAAAGATCTCTGGCACGTG 3337678 Query 69653 TTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712 |||||| |||||| |||| || || | ||| | || || | || || ||||||| | Sbjct 3337677 GTTCTTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAG 3337618 Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGG 69772 | || || || || || | |||| || | || || | || ||||| | |||| | Sbjct 3337617 GCTCCAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAG 3337558 Query 69773 CAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAG 69832 | ||||| ||||| |||||||||||| | | || ||| | || || ||||| || |||| Sbjct 3337557 CTGTGTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAG 3337498 Query 69833 AAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTT 69892 || || || || | | | |||| ||| | || | ||| |||||||| || || Sbjct 3337497 CAACGTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATT 3337438 Query 69893 TAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA 69952 |||| || | ||||| |||| | |||||||| || || || ||||| |||||| ||| Sbjct 3337437 TAGAAATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCA 3337378 Query 69953 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAG 70012 | | ||||||||| ||||||| | ||| | | | || || ||||| || | || | Sbjct 3337377 TACTCAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTG 3337318 Query 70013 GAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT---ATGTTTCAATAGCTGATT 70069 | || || ||||| ||||| | |||| ||| ||||||| ||||||||| ||| | Sbjct 3337317 GTGAAGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACAT 3337258 Query 70070 CTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 | || || | || || || | | || | ||||||||||||||| ||| ||| Sbjct 3337257 CAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAG 3337198 Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189 || ||| ||| || ||||||| || || || || | ||||| ||||| |||| Sbjct 3337197 CCACTTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGT 3337138 Query 70190 TGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG--- 70246 |||| || || ||| || | |||||| ||||||| | | ||| ||| |||| Sbjct 3337137 TGTAAGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTA---TTGGCCA 3337081 Query 70247 TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAA 70306 ||| ||||||| | | | | || ||||| |||| |||| | ||| | | Sbjct 3337080 AAACAATATCCAGTGCTGACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTA 3337021 Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 |||| | | |||||||| |||| ||| || | || |||||||| ||||| || | Sbjct 3337020 TGCAGTTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGT 3336961 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAG 70423 | || | || | || ||||| || ||||||||| |||| || | ||||| |||| Sbjct 3336960 TAGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAAG 3336905 >seq24714 Length=5211462 Score = 174 bits (192), Expect = 2e-38 Identities = 369/541 (68%), Gaps = 20/541 (4%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| || ||||| | ||| || ||||||||||| |||| ||| || | | || Sbjct 5055819 CCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTTC 5055878 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA- 39756 ||||| || ||||| | || ||||| |||||| ||||| ||||||||| || ||||| Sbjct 5055879 TTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTA-TG--GCAAAG 5055935 Query 39757 --TGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCTGTGCCCAA 39811 |||||||||| ||||| | | | ||| || | ||||| | |||||| Sbjct 5055936 GCTGCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCAA 5055992 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 || || | || | | ||||||||||| |||| || ||||| |||||| | | |||| Sbjct 5055993 TCTGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCATTTCT 5056052 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 | | |||||||| |||| || || || ||| ||| ||| || |||| ||||||||| Sbjct 5056053 TTGTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTTTTCC 5056110 Query 39932 ATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC-TGAACAAAA 39990 || || || || || || || || || | ||| ||| || || || || || ||| Sbjct 5056111 ATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AAA 5056166 Query 39991 TCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATG 40050 | ||| |||| |||| || ||| | ||||| | || ||||| || | || | || Sbjct 5056167 TTGCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAATATT 5056226 Query 40051 TTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATAT 40110 ||||||||| |||| || || ||| | | ||| | || ||||| || | Sbjct 5056227 GGATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCTAGTGCTGAATGTCTTTGGACAG 5056286 Query 40111 ATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATC 40170 || || || | || ||| || || |||||| || || || || ||||| ||||| Sbjct 5056287 GTCCACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAATATC 5056345 Query 40171 A 40171 | Sbjct 5056346 A 5056346 >seq27380 Length=10165399 Score = 143 bits (158), Expect = 4e-29 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| |||||||||||||| |||||||| || || || || | Sbjct 7666511 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 7666570 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||||| |||||||| |||||||||||||||||||| ||||| ||||| | Sbjct 7666571 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 7666630 Query 39759 CAAC 39762 | || Sbjct 7666631 CTAC 7666634 >seq5696 Length=1770758 Score = 111 bits (122), Expect = 2e-19 Identities = 240/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Plus Query 37348 CCTGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTC 37407 || || || ||||| ||| | || || || || |||| | || ||| ||||| | Sbjct 498367 CCAGTGGAACCAAAACCTCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTCT 498426 Query 37408 AGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATT 37467 | || || ||| | || |||| | | || ||||| || |||| ||| || | || | | Sbjct 498427 ATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTTGACT 498486 Query 37468 TTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCA 37527 | ||| || ||| ||| ||| | ||| | || |||| ||| || ||| |||||||| Sbjct 498487 TCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTACAATCTTCA 498546 Query 37528 TCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGATCTAGGAGCT 37584 || || || || |||||||||||||| |||| || ||| || || | | |||| Sbjct 498547 TCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCAGACCGTGAAGCT 498606 Query 37585 ATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATTGTCTT 37644 | |||||||||||| || | ||| | || |||||||| | ||| | ||| Sbjct 498607 ACTCTTCCATAACACCCACAAGGAAGCACTATCTGTATGTCTGTTTTCA-CAAGAG-CTT 498664 Query 37645 TCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCCCGCGGC 37697 ||||| ||| | || || ||||| || || || || | ||||| |||||||| Sbjct 498665 TCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCATAGCCCGCGGC 498719 >seq18140 Length=5205659 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||| ||||| ||||| | || || Sbjct 751639 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTTTTCTTT 751580 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| | |||||||| || || || || Sbjct 751579 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 751520 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 751519 ACCACTCTTTCCCC 751506 >seq17644 Length=22291198 Score = 105 bits (116), Expect = 9e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| ||||| || || || | ||| || |||||||| || | Sbjct 2993725 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 2993666 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 ||||||||||||| || | ||||| | || || ||| |||| ||||| || ||||||| Sbjct 2993665 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 2993606 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 70499 ||| | || || || || | || | ||||| || || ||||| Sbjct 2993605 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 2993560 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | ||| |||||||| ||||| | || | || || ||||| || || || | Sbjct 3016593 GAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGG 3016534 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || ||||||||||| |||||||| |||| |||||| | || |||||| ||| || Sbjct 3016533 GCTCCGTAATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCA 3016474 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || || || | || ||||| |||||||||| || || |||||||| || || || Sbjct 3016473 AAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 3016414 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| | |||||||| Sbjct 3016413 CGATGACGTTTATTTGA 3016397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| |||||||||||||| | ||| |||||||||| | | | Sbjct 3010770 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 3010711 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| || || || | || || ||||||| || Sbjct 3010710 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 3010651 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 3010650 TCCAGGTAAATAGC 3010637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686660465296080