Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq7272 89.7 6e-13 >seq7272 Length=15413533 Score = 89.7 bits (98), Expect = 6e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||| | |||||||| | || ||| | ||||| | || || || ||| Sbjct 13337711 TGTGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATTCTGA 13337652 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 |||||||| ||||||||| || | || || || || || | ||| |||||||| | Sbjct 13337651 GAAAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCT 13337592 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | | ||||| || ||||| ||| ||||||| ||||| Sbjct 13337591 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 13337555 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891 |||||||||||||||||||| ||||| ||||| ||||| || ||||| || || || Sbjct 13335709 GCATTTTTTGGAGCACAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGT 13335650 Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAA 32936 ||||| ||| | || || | | | |||||||| ||||||||| Sbjct 13335649 TTAACTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAA 13335605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602962735061280