Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq12132 417 1e-111 seq22719 407 2e-108 seq23499 376 3e-99 seq27123 315 1e-80 seq24714 165 1e-35 seq27380 125 1e-23 seq5696 118 1e-21 seq17644 109 8e-19 >seq12132 Length=2475592 Score = 417 bits (462), Expect = 1e-111 Identities = 656/935 (70%), Gaps = 12/935 (1%) Strand=Plus/Minus Query 47794 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 47850 |||| |||||| |||| |||| |||| ||| ||| | || ||||| |||||||| Sbjct 57351 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 57292 Query 47851 TTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 47910 | ||||| || || || | ||||| || || ||||| | ||||||| ||| ||||| | Sbjct 57291 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAATATTCT 57232 Query 47911 CCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCA 47970 ||||||| ||||||||||| || | | ||| || |||| || | ||| || | Sbjct 57231 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 57172 Query 47971 GTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTT 48030 |||| |||| || || || || ||| ||||| | || ||||| || || || | Sbjct 57171 GTCTGCCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAGTTCATCCCAATGAGCT 57112 Query 48031 TAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCG 48090 | || || | |||||| || || ||||| ||||| || ||||||| | ||||| Sbjct 57111 TCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 57052 Query 48091 ATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAAT 48150 ||| | ||||| |||| | | | ||||| ||||| | || ||||||| Sbjct 57051 CGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAAT 56992 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 |||| || | ||| |||||||| ||||| | ||| |||||||||||||| || ||||| | Sbjct 56991 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 56932 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 |||| ||||| |||||||| ||||| | || ||||| ||||||||||| |||||||| | Sbjct 56931 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 56872 Query 48271 CGGCCGCAAATGCGGTAAG-TCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGT 48326 | || ||||| || || | | || || || | || | |||| ||||| || Sbjct 56871 CTGCAGCAAAGGC--TACGCGCGTTCACCATAGGTAGCCTGTTTGTCCCCAATCCAGCGC 56814 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 |||||||| | |||||| ||||||||||| ||||| || ||||| |||||||| Sbjct 56813 AAGGCCCAATCTG---ACTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 56757 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 | |||| ||| |||||| | |||||| || || | |||||||||||||| || || Sbjct 56756 TCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 56697 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 || ||||| || || || || || || || ||||| | |||||||| ||||| || || Sbjct 56696 ATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCT 56637 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 |||||| || |||| || ||||||||||| ||||||| || ||||| || || Sbjct 56636 TGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAATAAAGCC 56577 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626 | || || ||||| ||| | || | || |||| | ||||| || || Sbjct 56576 AGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCAAATGTCC 56517 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | || || || || || ||||| || || ||||| || || |||||||| | | Sbjct 56516 TTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACATGTGC 56457 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||| | ||| | || |||||||| ||||| Sbjct 56456 CAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 407 bits (450), Expect = 2e-108 Identities = 652/938 (70%), Gaps = 20/938 (2%) Strand=Plus/Minus Query 47790 GTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCC 47846 |||| || |||||| |||| || | |||| ||| ||| | || ||||| |||||| Sbjct 8555357 GTTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCC 8555298 Query 47847 ATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATA 47906 || | ||||| || || || | ||||| || || ||||| || ||||||| ||| ||| Sbjct 8555297 ATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATA 8555238 Query 47907 TTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAA 47966 || |||||||| |||||||||| || | | ||| || |||| || | ||| Sbjct 8555237 TTCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGC 8555178 Query 47967 ATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATA 48026 || ||||| ||||| || || || || ||| ||||| | |||||||| || || Sbjct 8555177 ATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATG 8555118 Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086 || || || || | ||||| || || ||||| ||||| || ||||||| || ||| Sbjct 8555117 AGCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAATT 8555058 Query 48087 ATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCA 48146 || | |||| | ||||| |||| | | | ||||| ||||| | || ||| Sbjct 8555057 ATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAGCA 8554998 Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206 |||||||| || | ||| |||||||| ||||| | ||| |||||||||||||| || ||| Sbjct 8554997 AAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGC 8554938 Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266 || ||||| ||||| |||||||| ||||| | || ||||| ||||||||||| |||||| Sbjct 8554937 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCT 8554878 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCAC 48323 || || || ||||| || || | || || || | || || |||| ||||| Sbjct 8554877 TCCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAG 8554818 Query 48324 CGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 || |||||||| |||||||||| ||||||||||| ||||| || ||||| || ||| Sbjct 8554817 CGCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAAGA 8554758 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 || | |||| ||| |||||| | | |||| || || | | |||||||||||| || Sbjct 8554757 AATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAGAA 8554698 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 || || ||||| || || || |||| | | |||||| ||||| || Sbjct 8554697 TGTATGTTTTCCATGGC--------------AATAACAGCGGGTTTCTGTAATCTGAACT 8554652 Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563 || | |||| | || |||| || ||||||||||| ||||||| || ||||| || Sbjct 8554651 TCTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGAAA 8554592 Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATA 48623 || | || || ||||| ||| | || |||| |||| | ||||| || Sbjct 8554591 GCCAGAACGTGGGATATAAAGTATCTCTCCTTGGGCTTCAGGGATTCCCAGTGCCGAATG 8554532 Query 48624 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATA 48683 || || | | || || || || || ||||| || || ||||| || || |||||||| Sbjct 8554531 TCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACATC 8554472 Query 48684 TTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||| |||| ||| | ||| |||||||| ||||| Sbjct 8554471 TGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 376 bits (416), Expect = 3e-99 Identities = 557/785 (71%), Gaps = 11/785 (1%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | || ||||| ||||| Sbjct 2215556 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCC 2215615 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| ||||| || | |||| || || ||||| || ||||||| ||| || Sbjct 2215616 CATCCTCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 2215675 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 ||| |||||||| ||||||||||| || | | ||| || |||| || | ||| Sbjct 2215676 ATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAG 2215735 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || ||||| ||||| || || | || | | ||||| | || ||||| || | Sbjct 2215736 CATAAGTCTGTCTGCCACAAACCCAATGTGTTGCTTCATTAGAGTGCAGTTCATCCCAGT 2215795 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 || || || || | ||||| || || ||||| || || | ||||||| | || Sbjct 2215796 GAGCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGAACAGCATTGATAAT 2215855 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145 ||| | ||||| | ||||| |||| | | ||||| ||||| | || || Sbjct 2215856 TATTTCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGC 2215915 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||||||||| || | ||| |||||||| ||||| | ||| |||||||||||||| || || Sbjct 2215916 AAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGG 2215975 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| ||||| ||||| |||||||| ||||| | || ||||| ||||||||||| ||||| Sbjct 2215976 CATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCC 2216035 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTC--TCTCCGTAACTGGCTTCGTTGT---GTATC 48320 ||| || || ||||| || || | | | || || || | | || |||| || Sbjct 2216036 TTCCACTGCAGCAAAGGC--TACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTC 2216093 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380 || | ||||| || ||||||||||| ||||||||||| ||||| | ||||| ||| Sbjct 2216094 CAGTGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAG 2216153 Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440 ||||| | |||| || |||||| | |||||| || || | |||||||||||||| Sbjct 2216154 AGAAATTCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCA 2216213 Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500 || || || ||||| | || || || ||||| || ||||| | |||||||| ||||| Sbjct 2216214 GAATGTATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGA 2216273 Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 ||||| | |||||| || |||| || ||||||||||| || | ||| || ||||| Sbjct 2216274 ACCTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAG 2216333 Query 48561 AATGC 48565 || || Sbjct 2216334 AAAGC 2216338 >seq27123 Length=4923932 Score = 315 bits (348), Expect = 1e-80 Identities = 673/997 (68%), Gaps = 24/997 (2%) Strand=Plus/Minus Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060 ||| || |||||| |||||||| || || | || |||| || |||||| || | Sbjct 3337734 TAAGTCATTTCATGAAGAGATCTGGAATTGAAAGGGCAAAAA---GATCTCTGGCACGTG 3337678 Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 ||||||| |||||| ||||||| || | ||| | || || | || || ||||||| | Sbjct 3337677 GTTCTTCCTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAG 3337618 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 | || || || || || | ||||||| | || || | || ||||| | ||||| | Sbjct 3337617 GCTCCAGGTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAG 3337558 Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240 | ||||| ||||| ||||||| ||| | | || || | || | ||||| || |||| Sbjct 3337557 CTGTGTTGTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAG 3337498 Query 78241 AAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCT 78300 || || || ||| | | | |||| ||| | | | || |||||||| || | Sbjct 3337497 CAACGTAGCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATT 3337438 Query 78301 TAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA 78360 |||| || | || || |||| | || || || || || || || |||||||| ||| Sbjct 3337437 TAGAAATCAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCA 3337378 Query 78361 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCG 78420 | | ||||||||| ||||||| | ||| | | || || ||||| || | || | Sbjct 3337377 TACTCAGAAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTG 3337318 Query 78421 GAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATG---TTTCAATAGCTGATT 78477 | || ||||| |||||||| | |||| ||| ||||||| || ||||||| ||| | Sbjct 3337317 GTGAAGCATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACAT 3337258 Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537 | ||||| || || || || || | ||| | ||||||||||||||| ||| ||||| Sbjct 3337257 CAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAG 3337198 Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 || || ||| || |||||||| || || || | | ||||||||||| |||| Sbjct 3337197 CCACTTTTCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGT 3337138 Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657 |||| || || ||| || | |||||| ||||||| | | |||||| ||| | || Sbjct 3337137 TGTAAGAGAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTT--ATTGGCCAA 3337080 Query 78658 --CAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAAC 78715 ||||||||| | | | | | || ||||| || |||| | ||| | | Sbjct 3337079 AACAATATCCAGTGCTGACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTAT 3337020 Query 78716 ATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATT 78775 ||||| | | |||||||| |||| ||| || | || |||||||| ||||| | || Sbjct 3337019 GCAGTTATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTT 3336960 Query 78776 AGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGC 78835 ||| ||||| | || || || || |||||||| |||| || | ||||| ||| || Sbjct 3336959 AGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGT 3336903 Query 78836 TGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTG 78895 ||| || | ||| |||||| || || | ||||||||| | || | | ||| Sbjct 3336902 TGC-AT--------CCAAACTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTG 3336852 Query 78896 AATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAA 78955 || |||||||| | ||| | | ||||| |||| || | | | ||||||||| || Sbjct 3336851 GATTACTTTCATAGTGATCTGAGCGGGATCAGCAAAATCCATAATGAGTCCATAACA-AA 3336793 Query 78956 TTTTCT-AATACGAGATGTGATTTTATCAAATATAAC 78991 |||| || ||||| | ||||| |||||||| || Sbjct 3336792 GCTTCTGGATTAGAGATTTAATTTTGTCAAATATGAC 3336756 >seq24714 Length=5211462 Score = 165 bits (182), Expect = 1e-35 Identities = 364/539 (68%), Gaps = 14/539 (3%) Strand=Plus/Plus Query 48161 ACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTT 48220 ||| ||||| || ||||| | ||| || ||||||||||| || | ||| |||| |||| Sbjct 5055818 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 5055877 Query 48221 TTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAA 48280 ||||| || ||||| | |||||||| |||||| |||| ||||||||| | ||||| Sbjct 5055878 CTTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTATG---GCAAA 5055934 Query 48281 TGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATC 48337 || | || ||||| | | || || |||| ||||| | |||||||| Sbjct 5055935 GGCTGCAACAAGTTCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCAATC 5055994 Query 48338 AGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATT 48397 |||| || | | ||||||||||| |||| || ||||| |||||||| | |||| || Sbjct 5055995 TGCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCATTTCTTT 5056054 Query 48398 GCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAAT 48457 | | |||||||| | || || || || ||| ||| ||| || || | || ||||| || Sbjct 5056055 GTTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTTTTCCAT 5056112 Query 48458 TGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC-CGTACAAAATC 48516 || || || || || || || || | |||||| ||| || || | || |||| Sbjct 5056113 AGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AAATT 5056168 Query 48517 GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTT 48576 | || |||| || | || ||| | ||||| | || ||||| || | | | || Sbjct 5056169 GCTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAATATTGG 5056228 Query 48577 TAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATAT 48636 ||||||||| |||| | | |||| | | ||| | || ||||| || | | Sbjct 5056229 ATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCTAGTGCTGAATGTCTTTGGACAGGT 5056288 Query 48637 CTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCA 48695 | || || | || ||| || || ||||||||| ||||| || ||||| |||||| Sbjct 5056289 CCACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAATATCA 5056346 >seq27380 Length=10165399 Score = 125 bits (138), Expect = 1e-23 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| |||||||||||||| || ||||| ||||| ||||| ||| Sbjct 7666513 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 7666572 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| ||||||||||| |||||||| || || ||||| || Sbjct 7666573 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGC 7666631 Score = 102 bits (112), Expect = 1e-16 Identities = 110/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | || ||||| ||||| Sbjct 7664664 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 7664723 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| || || || | ||||| || || ||||| || ||||||| ||| || Sbjct 7664724 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 7664783 Query 47906 ATTTTCCATAAAATCAAATGGATT 47929 ||| |||||||| ||||||||||| Sbjct 7664784 ATTCTCCATAAAGTCAAATGGATT 7664807 >seq5696 Length=1770758 Score = 118 bits (130), Expect = 1e-21 Identities = 244/357 (68%), Gaps = 11/357 (3%) Strand=Plus/Plus Query 45877 CCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCT 45934 |||||||| ||||| ||| ||| | | ||||| || |||| | || ||| ||||| | Sbjct 498367 CCAGTGGAACCAAAACCTCCTGAAC--CCCTTTCGGTGTCATCCAAAGCTTGAACTTCTT 498424 Query 45935 TCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTA 45994 | || || ||| | || |||| | | || || || || |||| |||||| | || | Sbjct 498425 CTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTTGA 498484 Query 45995 TTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTT 46054 |||||| | ||||| ||| ||| | ||| | || |||| | |||||| |||||| Sbjct 498485 CTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTACAATCTT 498544 Query 46055 CATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGGAG 46111 ||||||| || || |||| ||||| ||| |||| || || ||||| | | || Sbjct 498545 CATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCAGACCGTGAAG 498604 Query 46112 CTATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTCC 46171 ||| |||||||||||| || | ||| | || |||||||| | ||| | Sbjct 498605 CTACTCTTCCATAACACCCACAAGGAAGCACTATCTGTATGTCTGTTTTCA-CAA-GAGC 498662 Query 46172 TTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 ||||||| ||| || || || || || || |||||||| | ||||| || || || Sbjct 498663 TTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCATAGCCCGCGGC 498719 >seq17644 Length=22291198 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | ||| Sbjct 3021677 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 3021618 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || |||||||| ||||| || ||||| || || | | |||||| Sbjct 3021617 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 3021558 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 3021557 TTTCTTATACCAT 3021545 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || || || || | || || || ||||| |||||||| | |||||||| ||||| Sbjct 3000248 GTACCAGCGTTGAAGAGAGTGGGCGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 3000189 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| |||| || ||||| || || || || || | ||| | ||||||| Sbjct 3000188 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCCACAGATACTCTCATCAAC 3000129 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 3000128 ATATGCTGTGGTCTTTCAGCC 3000108 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| ||||||| ||| ||||||| || | ||| Sbjct 3010770 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 3010711 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| || || || | || || ||||||| || Sbjct 3010710 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 3010651 Query 78123 TCTAGATATATTGC 78136 || || || || || Sbjct 3010650 TCCAGGTAAATAGC 3010637 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 || || | ||| |||||||| ||||| | || || || || ||||| || ||||||| Sbjct 3016593 GAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTG-GCAAGGTCACAGCTGGCTTCCAG 3016535 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 |||||||||||||| |||||||| |||| |||||| | || ||||| ||| || Sbjct 3016534 GGCTCCGTAATAAATAGTTTCGAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTC 3016475 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| || || | || ||||| |||||||| | || || || ||||| ||||| || Sbjct 3016474 AAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 3016415 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 3016414 GCGATGACGTTTATTTGA 3016397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694417659862080