Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq12132 401 9e-107 seq22719 376 4e-99 seq23499 347 2e-90 seq27123 279 7e-70 seq24714 190 3e-43 seq27380 122 1e-22 seq17644 109 8e-19 seq18140 105 1e-17 seq5696 105 1e-17 >seq12132 Length=2475592 Score = 401 bits (444), Expect = 9e-107 Identities = 660/943 (70%), Gaps = 19/943 (2%) Strand=Plus/Minus Query 46279 ATTC-TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCC 46334 |||| |||| ||||| |||| |||| |||| ||| ||| | | |||||| ||||| Sbjct 57356 ATTCATTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 57297 Query 46335 CATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 46394 ||| | || || || ||||| | ||||| || || ||||| | ||||||| ||| || Sbjct 57296 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTATCCTTCCAGTGAAAT 57237 Query 46395 ATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGA 46454 ||| |||||||| ||||| ||||| || | ||| || |||| || | ||| Sbjct 57236 ATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAG 57177 Query 46455 AATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA---CAATTCATTCC 46511 || ||||| |||| || || || || || || | ||||| | || ||||| || Sbjct 57176 CATAAGTCTGCCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGTGCAGTTCATCCC 57120 Query 46512 TATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGA 46571 ||||| || || || | |||||| || || ||||| ||||| || ||||||| || Sbjct 57119 AATGAGCTTCACAGGCAAAGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATT-GA 57061 Query 46572 TA-TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAAC 46630 || |||| |||| | ||||| |||| || | | ||||| ||||| | | Sbjct 57060 TAATTATTTCGCATACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGC 57001 Query 46631 ATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCC 46690 | ||||||||||| || | || |||||||| ||||| | ||| |||||||||||||| | Sbjct 57000 AAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGC 56941 Query 46691 CAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATA 46750 ||||||| ||||| || || |||||||| ||||| | || ||||| ||||||||||| | Sbjct 56940 CAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGA 56881 Query 46751 TGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAA 46807 ||||||| || || || || || || | | || || || | || | || | || Sbjct 56880 TGCCTTCCACTGCAGCAAAGGCTACGCG-CGTTCACCATAGGTAGCCTGTTTGTCCCCAA 56822 Query 46808 TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 46867 |||| | |||||||| | | ||||| ||||||||||| ||||| || ||||| | Sbjct 56821 TCCAGCGCAAGGCCCAATCTGAC---TTCTTGACACAAGGCATCGTTTCAATGGCATTGA 56765 Query 46868 AGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTT 46927 ||||||| | |||| | |||||| | || || || || | ||||||||||||| Sbjct 56764 AGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTT 56705 Query 46928 CTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCT 46987 | ||||| |||||||| || || || || || || || ||||| | ||||| ||||||| Sbjct 56704 CAGAATGTATGTTTTCCATGGCAATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCT 56645 Query 46988 GTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAA 47047 | || ||| |||||| || ||| || ||||| ||||| ||||||| || |||| Sbjct 56644 GAACTTCTTGGTTAAATCGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAA 56585 Query 47048 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCAT 47107 | || |||| || || ||||| ||| | || |||| |||| | ||||| Sbjct 56584 ATAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCC 56525 Query 47108 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTAT 47167 || || || || | || || || || || |||||||| || ||||| || || |||| Sbjct 56524 AAATGTCCTTGGACAGCTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTAT 56465 Query 47168 ACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 |||| | ||| ||| | | || | || || ||||| ||||| Sbjct 56464 ACATGTGCCAGATACCGTGGTACTCGACGGGGAAAATGACAAA 56422 >seq22719 Length=8987742 Score = 376 bits (416), Expect = 4e-99 Identities = 647/940 (69%), Gaps = 26/940 (3%) Strand=Plus/Minus Query 46280 TTCTTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCA 46336 ||| || ||||| |||| || | |||| ||| ||| | | |||||| ||||||| Sbjct 8555356 TTCATTTGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCA 8555297 Query 46337 TTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 46396 | | || || || ||||| | ||||| || || ||||| || ||||||| ||| |||| Sbjct 8555296 TCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATAT 8555237 Query 46397 TTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAA 46456 | |||||||| |||| ||||| || | ||| || |||| || | ||| | Sbjct 8555236 TCTCCATAAAGGCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 8555177 Query 46457 TCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA---CAATTCATTCCTA 46513 | ||||| ||||| || || || || || || | ||||| | |||||||| || | Sbjct 8555176 TAAGTCTGTCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGTGCAATTCATCCCAA 8555120 Query 46514 TGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATA 46573 |||| || || || | ||||| || || ||||| ||||| || ||||||| | | Sbjct 8555119 TGAGCTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTCATAA 8555060 Query 46574 TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATG 46633 |||| | ||||| | ||||| |||| || | | ||||| ||||| | || | Sbjct 8555059 TTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTATGTGTTTGAACATCAGGCAAG 8555000 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 |||||||||| || | || |||||||| ||||| | ||| |||||||||||||| |||| Sbjct 8554999 CAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAG 8554940 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| ||||| || || |||||||| ||||| | || ||||| ||||||||||| |||| Sbjct 8554939 GCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGC 8554880 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCC 46810 |||| || || || || || |||| | || || || | || || || | ||||| Sbjct 8554879 CTTCCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCC 8554820 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | | |||||||| ||||| |||| ||||||||||| ||||| || ||||| || | Sbjct 8554819 AGCGCAAGGCCCAATCTGCCTTCTTCTGGACACAAGGCATCGTTTCAATGGCATTGAAAA 8554760 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 |||| | |||| | |||||| | | || || || | | |||||||||||| | Sbjct 8554759 GAAATTCCCTTTCGTTGGGATCTTTTATGCAAGTGTCAATAAGGAAACTATACATTTCAG 8554700 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 |||| |||||||| || || || |||| | | ||| |||||||| | Sbjct 8554699 AATGTATGTTTTCCATGGC--------------AATAACAGCGGGTTTCTGTAATCTGAA 8554654 Query 46991 CCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 | ||| | |||| | || ||| || ||||| ||||| ||||||| || ||||| | Sbjct 8554653 CTTCTTGGCTAAATTGCTCCACCAAGTTTTCATTTACTATGTCATCACTTGCTGCAAAGA 8554594 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | |||| || || ||||| ||| | || | || |||| | ||||| | Sbjct 8554593 AAGCCAGAACGTGGGATATAAAGTATCTCTCCTTGGGCTTCAGGGATTCCCAGTGCCGAA 8554534 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 | || || | | || || || || || |||||||| || ||||| || || ||||||| Sbjct 8554533 TGTCCTTGAACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACA 8554474 Query 47171 TATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | | ||| |||| | || | ||| || ||||| ||||| Sbjct 8554473 TCTGCCAGATATTGTGGTACTCGATGGGGAAAATGACAAA 8554434 >seq23499 Length=2348749 Score = 347 bits (384), Expect = 2e-90 Identities = 614/889 (69%), Gaps = 12/889 (1%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339 |||| ||||| |||| || | |||| ||| ||| | | |||||| |||||||| Sbjct 2215561 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTTGACATCACTCCCATCC 2215620 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || || |||||||| | |||| || || ||||| || ||||||| ||| ||||| | Sbjct 2215621 TCTGATACTCACCTACTCTCGTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 2215680 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||||||| ||||| ||||| || | ||| || |||| || | ||| || | Sbjct 2215681 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 2215740 Query 46460 GTCTATCTGCAACGAATTCTATATACGTT--TTCATCATTTCACAATTCATTCCTATGAG 46517 |||| ||||| || || | || | ||| ||||| | || ||||| || |||| Sbjct 2215741 GTCTGTCTGCCACAAACCCAATGT--GTTGCTTCATTAGAGTGCAGTTCATCCCAGTGAG 2215798 Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATA-TTA 46576 || || || | ||||| || || ||||| || || | ||||||| |||| ||| Sbjct 2215799 CTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGCTCTAACCGAACAGCATT-GATAATTA 2215857 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 | | |||| | ||||| |||| || | ||||| ||||| | || |||| Sbjct 2215858 TTTCTCTTACCCTCTCCTCTGATGGTTTGTGTACTGGGTGTTTGAACATCAGGCAAGCAA 2215917 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 ||||||| || | || |||||||| ||||| | ||| |||||||||||||| ||||||| Sbjct 2215918 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 2215977 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | ||||| || || |||||||| ||||| | || ||||| ||||||||||| ||||||| Sbjct 2215978 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAAATGCCTT 2216037 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | || || || || || || | | || || || | | || || | | |||| Sbjct 2216038 CCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAACCTCTTTGTCCCCAGTCCAGT 2216097 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 46873 ||||| || ||||| ||||| ||||||||||| ||||| | ||||| ||||||| Sbjct 2216098 GCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAACGGCATTGAAGAGAA 2216157 Query 46874 AGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933 | | |||| |||||| | || || || || | |||||||||||||| |||| Sbjct 2216158 ATTCCCTTTCGCTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 2216217 Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 | |||||||| | || || || ||||| || ||||| | ||||| |||||||| |||| Sbjct 2216218 GTATGTTTTCCCTGGCAATTTGGAATCCATAGAAACAGCGGGCTTCTGTAATCTGAACCT 2216277 Query 46994 CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053 || | |||||| || ||| || ||||| ||||| || | ||| || ||||| || | Sbjct 2216278 CTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCCTTACTCGCTGCAAAGAAAG 2216337 Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATAT 47113 ||| || || ||||| | | | || |||| |||| | ||||| || | Sbjct 2216338 CCAGAACGTGGGATATAAAGTCTCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCGAATGT 2216397 Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 | | || | || || || || || |||||||| || ||||| || || Sbjct 2216398 CCTCGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTT 2216446 >seq27123 Length=4923932 Score = 279 bits (308), Expect = 7e-70 Identities = 658/991 (66%), Gaps = 26/991 (3%) Strand=Plus/Minus Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 |||||| |||||||| || || | || |||| || |||||| || | ||||||| Sbjct 3337727 TTTCATGAAGAGATCTGGAATTGAAAGGGCAAAAA---GATCTCTGGCACGTGGTTCTTC 3337671 Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722 |||||| ||||||| || | ||| | ||| || | || || ||||||| || || || Sbjct 3337670 CTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAG 3337611 Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTT 76782 || || || | | || || | || || | || ||||| | ||||| || ||||| Sbjct 3337610 GTAAATAGCAAATGCTCCAGGACACTTGTTCCTACCTTGATCCAGATATCAAGCTGTGTT 3337551 Query 76783 ATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATA 76842 ||||| ||||||| ||| | | || ||| | || | ||||| || |||| || || Sbjct 3337550 GTTATATACTCTCAGCATCAGTACAAGGCCACTGGAATTGCCATTAGTCCCAGCAACGTA 3337491 Query 76843 ACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGAT 76902 || ||| | | |||| ||| | || | || |||||||| || |||||| || Sbjct 3337490 GCTGCCAGTAGGCCAAATACAACTCAGAGCAACACCAATTCCTCCAGCAGATTTAGAAAT 3337431 Query 76903 TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 76962 | ||||| |||| | |||||||| ||||| || || || ||||| |||| | || Sbjct 3337430 CAATGCACATTGTTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATACTCAG 3337371 Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 ||||||| ||||||| | ||| | | || || ||||| || | || || || || Sbjct 3337370 AAGAAAATAGCTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTTGGTGAAGC 3337311 Query 77023 ATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG---TTTCAATAACTGCTTCTATATC 77079 |||||| ||||| | |||| ||| ||||||| || ||||||| || | || || || Sbjct 3337310 ATGAGTAAACCACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAATGTC 3337251 Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 || || || || |||| || | ||||||||||||||| ||| ||| | || Sbjct 3337250 TTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGTGGTATTTCAGCCACTTT 3337191 Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199 ||| || |||||||| || || || | | ||||||||||| |||||||| || Sbjct 3337190 TCCATTGATCTTCAACAAATAAGACCACTCTAGCATCTTAAAACCAAAGTAGTTGTAAGA 3337131 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG---TAACAAT 77256 || ||| || | |||||| | ||||| | | || ||| |||| |||||| Sbjct 3337130 GAAATCTTGGTCACAGATAATAGCAGAATTCAAGTGATCTTTA---TTGGCCAAAACAAT 3337074 Query 77257 ATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTT 77316 ||||| | | | | | || ||||| || | |||| | ||| | | |||| Sbjct 3337073 ATCCAGTGCTGACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTATGCAGTT 3337014 Query 77317 AAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATAC 77376 | | | ||||||||| || | || || | || |||||||| ||||| | || || || Sbjct 3337013 ATAGAGGTCTTCCATCACATAACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAGAC 3336954 Query 77377 GGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTAT 77436 || | ||||| || || || |||||| |||| || | ||||| |||| Sbjct 3336953 AGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGTCAAGGT--------- 3336903 Query 77437 TTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAAC 77496 ||| | ||| |||||| ||| || |||| || || | || | | ||| || || Sbjct 3336902 ---TGCATCCAAACTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGATTAC 3336846 Query 77497 TTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT 77556 |||||| | || | ||||| |||| || | | | |||||||| || |||| Sbjct 3336845 TTTCATAGTGATCTGAGCGGGATCAGCAAAATCCATAATGAGTCCATAACA-AAGCTTCT 3336787 Query 77557 -AATACGAGATGTGATTTTATCAAACATGAC 77586 || ||||| | ||||| ||||| ||||| Sbjct 3336786 GGATTAGAGATTTAATTTTGTCAAATATGAC 3336756 >seq24714 Length=5211462 Score = 190 bits (210), Expect = 3e-43 Identities = 369/538 (69%), Gaps = 14/538 (3%) Strand=Plus/Plus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||| || ||||| | ||| || ||||||||||| |||| ||| |||| | || Sbjct 5055819 CCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTTC 5055878 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 ||||| || ||||| | |||||||| |||||| |||| ||||||||| || | | Sbjct 5055879 TTGAGGCAGAATATCGATGCGAAAGAACCAGAAGAGAAGGTGCCTTCTATGGCAAAGGCT 5055938 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCA 46827 || |||||| ||||| | | ||||| || | |||||| | |||||||| Sbjct 5055939 GCAACAAGT---TCTCCATGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCAATCT 5055995 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 |||| | | | ||||||||||| |||| || ||||| |||||||| | |||| | Sbjct 5055996 GCCTCCTCCCTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCATTTCTTTG 5056055 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 | |||||||| |||| || || || ||| ||| ||| || |||| |||||||| ||| Sbjct 5056056 TTGTCTTTAAC--ATGTGTCAATAAAGAGATTATCCATGTCAGAATAGATGTTTTCCATA 5056113 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC-TGTACAAAATCG 47006 || || || || || || || || | ||| ||| ||| || || || || |||| | Sbjct 5056114 GCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AAATTG 5056169 Query 47007 TTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTT 47066 || ||| || | || ||| | ||||| | || ||||| || | || | || Sbjct 5056170 CTCCACCAAGTTTTTATCAACTGTGCCATCGCATGCTGCAAAGAAAGTCAGAATATTGGA 5056229 Query 47067 AATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 ||||||||| |||| || | |||| | | ||| | || ||||| || | || Sbjct 5056230 TATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCTAGTGCTGAATGTCTTTGGACAGGTC 5056289 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCA 47184 || || | || ||| ||| || ||||||||| ||||| || ||||| |||||| Sbjct 5056290 CACCTCCTGGGCCATCCGGAAGGAAATCTCTGCTTTCTTATA-ATTTTCCAAATATCA 5056346 >seq27380 Length=10165399 Score = 122 bits (134), Expect = 1e-22 Identities = 100/122 (82%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| |||||||||||||| |||||||| ||||| || || ||| Sbjct 7666513 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 7666572 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| |||||||| || || || || || Sbjct 7666573 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 7666632 Query 46774 AC 46775 || Sbjct 7666633 AC 7666634 >seq17644 Length=22291198 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | ||| Sbjct 3021677 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 3021618 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| || |||||||| ||||| || ||||| || || | | |||||| Sbjct 3021617 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 3021558 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 3021557 TTTCTTATACCAT 3021545 Score = 93.3 bits (102), Expect = 6e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || ||||| || || || || || || Sbjct 2993723 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGATA 2993664 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 2993663 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 2993604 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 77502 || | || || || || | || | ||||| || || ||||| Sbjct 2993603 TCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 2993560 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| |||||| | || || | ||| ||||| || | || | || | || || || Sbjct 3016609 TCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTC 3016550 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTT 76052 || || || || | || ||||||||||| |||||||| |||| |||||| || | | | Sbjct 3016549 ACAGCTGGCTTCCAGGGCTCCGTAATAAATAGTTTCGAAGATCTGCTTATTCAATAAC-T 3016491 Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112 | ||||| ||| |||||||| || | || ||||| |||||||| || || || | Sbjct 3016490 GGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTA 3016431 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 | ||||| ||||| || | ||| | ||||| || Sbjct 3016430 CCCCAATTCCAATGGGGCGATGACGTTTATTTGA 3016397 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || || || || | || || || |||||||| ||||| | |||||||| ||||| Sbjct 3000248 GTACCAGCGTTGAAGAGAGTGGGCGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 3000189 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| |||| || || || || || || || |||| || | ||||||| Sbjct 3000188 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCCACAGATACTCTCATCAAC 3000129 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 3000128 ATATGCTGTGGTCTTTC 3000112 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| ||| Sbjct 3011233 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 3011174 Query 76580 CACTC 76584 || || Sbjct 3011173 CAGTC 3011169 >seq18140 Length=5205659 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| || ||||| || || | || | Sbjct 751641 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTTTTCT 751582 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| | ||||||||||| ||||| | Sbjct 751581 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGG 751522 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 751521 CCACCACTCTTTCCCC 751506 >seq5696 Length=1770758 Score = 105 bits (116), Expect = 1e-17 Identities = 216/317 (68%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 44402 ATCTAGAGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGC 44461 ||| | || ||| ||||| |||| || || ||| | || |||| | | || || || || Sbjct 498405 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 498464 Query 44462 TATTCTATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCC 44521 |||| ||||||| | || | || ||| | ||||| ||| ||| | || | || || Sbjct 498465 AATTCGATCACCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 498524 Query 44522 AATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAATA---CCTTTTAG 44578 || || || ||| ||||||||||||| || ||| |||| ||||||||| |||| Sbjct 498525 AACATTTCCTCTACAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 498584 Query 44579 AGAAAGACCCGATCTAGGCGCTATTCTTCCATAACAGAATTTTGGCATAGACATACGAAT 44638 || | || || | | |||| |||||||||||| || | || | || Sbjct 498585 AGCCAAGCCAGACCGTGAAGCTACTCTTCCATAACACCCACAAGGAAGCACTATCTGTAT 498644 Query 44639 ATCTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTAT 44696 |||||||| | ||| | |||||||| ||| || || || ||||| || |||||||| Sbjct 498645 GTCTGTTTTCA-CAAGAG-CTTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTAC 498702 Query 44697 AAATCATATCCTGCCGC 44713 | ||||| || || || Sbjct 498703 AGGTCATAGCCCGCGGC 498719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712676656391040