Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq16616 87.8 7e-13 >seq16616 Length=7972016 Score = 87.8 bits (96), Expect = 7e-13 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 |||||| || |||| |||||| | || | ||| |||||||| | |||| ||| |||| || Sbjct 2012343 ATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGG-TGAACGGTGAGCTGTC 2012285 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| |||| ||| | || | |||||| | | || || || || ||||||||||| Sbjct 2012284 TTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTCAACATTGCCAG 2012225 Query 52229 CTATTCCTTGCTGACGCATCTGATTGC 52255 ||| || |||| ||| | |||| || Sbjct 2012224 CTACGCCCTGCTCACGTACATGATCGC 2012198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190030711766420