Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq2190 86.0 1e-11 >seq2190 Length=49145316 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 77353 CCGGGCACCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGG 77412 |||||| ||| || |||| ||||||||||||||||||||| |||||||| ||||| || Sbjct 42219645 CCGGGCCGCAGGAGCGTGGTGTAGCACAGGTTGTGGGCCATCATGATGGACGGGTACAGC 42219586 Query 77413 CTGGCGAAGTCGAAGACCGCCACGGGGTCGTTGTAGTAGC 77452 || |||||| | | || | |||| ||| |||||||| Sbjct 42219585 GAGGAGAAGTCCAGGGTGGCGATGGGGACGTCGTAGTAGC 42219546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771213437094600