Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1644 105 5e-18 >seq1644 Length=117903854 Score = 105 bits (116), Expect = 5e-18 Identities = 128/173 (74%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || |||| |||||||||||| || || || || || | || Sbjct 57526159 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAATC 57526218 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || ||||| ||| ||| ||| |||||| |||||||| ||| |||||||| || Sbjct 57526219 CCCTTCTTCTCTGGCGGAAAATCCCAAGCTATCCAGAAAGTCTCGGGATCCATTGGCATC 57526278 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGA 25945 |||||| || || ||||| || |||||||| | |||||||| || |||| Sbjct 57526279 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC-CTGA 57526330 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || ||||||||||||||| || || || || | |||||| Sbjct 57521670 GCGATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCCATG 57521729 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | ||||| |||||||| ||||| || || ||||| ||| ||| || ||||| || Sbjct 57521730 T-CTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGGCA 57521788 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | || | ||| ||||| || || || || Sbjct 57521789 GAGGGCATGGCATGGAGGCAGCGCCATCAG 57521818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340078714209465